LOCUS       NM_001105982            2121 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus sushi domain containing 4 (Susd4), mRNA.
ACCESSION   NM_001105982 XM_001063664 XM_223014
VERSION     NM_001105982.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Holmquist E, Okroj M, Nodin B, Jirstrom K and Blom AM.
  TITLE     Sushi domain-containing protein 4 (SUSD4) inhibits complement by
            disrupting the formation of the classical C3 convertase
  JOURNAL   FASEB J 27 (6), 2355-2366 (2013)
   PUBMED   23482636
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473985.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_223014.4, XM_001063664.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: FQ212123.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132261, SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q26"
     gene            1..2121
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /note="sushi domain containing 4"
                     /db_xref="GeneID:289335"
                     /db_xref="RGD:1564043"
     exon            1..138
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            139..321
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     CDS             174..1646
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /codon_start=1
                     /product="sushi domain-containing protein 4"
                     /protein_id="NP_001099452.1"
                     /db_xref="GeneID:289335"
                     /db_xref="RGD:1564043"
                     /translation="MYHGMNPSNGDGFLEQQLQQQQPQSPQRLLAVILWFQLALCFGP
                     AQLTGGFDDLNVCADPGVPENGFRTPSGGVFFESSVARFHCQDGFKLKGSSKRLCVKR
                     LNGTLGWIPSDKPLCIQEDCRIPRIEDAEIHNKTYRHGDKLIINCHEGFKIRYPDLYN
                     MVSLCRDDGTWDNLPICQGCLRPLASSNGYVNISEFQTSFPVGTVIAYRCFPGFKLEG
                     SEYLECLHNLIWSSSPPRCLALEVCPLPPMVSHGDFICHPRPCERYNHGTVVEFYCDP
                     GYSLTSDYKYITCQYGEWFPSYQVYCIKSEQTWPSTHETLLTTWKIVAFTATSVLLVL
                     LLVILARMFQTKFKAHFPPRGPPRSSSSDPDFVVVDGVPVMLPTYDEAVNGSSSALGP
                     GYLASVGQGCPLPVDDQSPPAYPGSGDTDTGPGESETCDSTSGSSEMLQSLYSPPMCQ
                     GGSRPAPDTPDTISSTAGEVASTSPGIDIADEIPLMEEDP"
     exon            322..534
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            535..708
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            709..897
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            898..1089
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            1090..1234
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            1235..1617
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
     exon            1618..2121
                     /gene="Susd4"
                     /gene_synonym="RGD1564043"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcgctcctc tgtcttgctc gctcgttcgc tcgctcgctc gcgcagcggc ggcagcagag
       61 gtcgcgcaca gatgcgggtt agactggcgg ggggaggagg cggaggaggg aaggaagctg
      121 catgcatgag acccacagac tcttgcaagc tggatgccct ctgtggatga aagatgtatc
      181 atggaatgaa cccgagcaat ggagatggat ttctagagca gcagctgcag caacagcagc
      241 ctcagtcccc ccagagactc ttggccgtga tcctgtggtt tcaactggcg ctgtgctttg
      301 gccctgcgca gctcaccggt gggttcgatg acctcaacgt gtgtgctgac ccaggcgtcc
      361 cagagaatgg cttcaggacc cccagcggag gtgtcttctt tgaaagctca gtagcccgat
      421 ttcactgcca agacggtttc aagctgaagg gctcctcaaa gagactgtgt gtgaaacgcc
      481 tcaatgggac cctaggctgg atcccaagtg acaaacctct ctgcatacaa gaagactgcc
      541 ggatcccccg aattgaagat gctgagattc ataacaagac atatagacac ggggataagt
      601 tgatcatcaa ctgtcatgag ggattcaaga tccggtaccc cgacctgtac aacatggttt
      661 cgttatgtcg tgatgatggg acgtgggata acctgcccat ctgtcaaggc tgcctgagac
      721 ctctagcctc ttccaatggc tacgtgaaca tctccgagtt ccagacctcc ttccctgtgg
      781 gaactgtgat cgcttatcgc tgcttccctg gatttaaact cgagggttct gagtaccttg
      841 agtgcttaca caaccttatc tggtcgtcca gcccaccccg gtgccttgct ctggaagttt
      901 gtccactacc tcctatggtg agtcacggag atttcatctg ccacccgagg ccttgtgagc
      961 gctacaacca tgggactgtg gtggaattct actgtgatcc cggctacagc ctcaccagtg
     1021 actacaagta catcacctgc cagtatggag agtggtttcc ttcctaccaa gtctactgca
     1081 tcaaatcaga acaaacgtgg cccagtaccc acgagaccct cctgaccaca tggaagatcg
     1141 tggcattcac agccaccagt gtgctgctgg tgttactgct cgtcatcctg gccaggatgt
     1201 tccagaccaa gttcaaggcc cacttccccc ccaggggtcc tcccaggagt tccagcagtg
     1261 accctgactt cgtggtagtg gacggagtgc ctgtcatgct cccgacctac gatgaggctg
     1321 tgaatggcag ctcgagtgcc ttaggccccg ggtacctggc ctccgtgggc cagggctgtc
     1381 ctttacctgt ggatgaccag agccctccag cctaccccgg ctccggggac acggacacag
     1441 gccctgggga gtcagaaacc tgtgacagta cctcgggctc ctccgagatg ctccagagtc
     1501 tatattcacc cccgatgtgc caagggggca gccgccctgc cccagacacc cctgacacga
     1561 tttcaagcac agcaggggag gtagcatcca caagcccagg catcgacatt gcagatgaga
     1621 tcccactcat ggaagaggat ccctagtctg gtaacatcct gctaacccca ctgtcccctt
     1681 tgggggaaag agccttgaac cttggagaga ggccacagga ggacagagct tgggcacaag
     1741 ggggtgcttt taatctatct acacgaggac ggtgattcat accacacaac tccagcagga
     1801 ctgtgggtct ggccgacagc aatggcggtg ctttcaaatg agactcaagg gtttatcatg
     1861 acctgcaggg aacagagggc agaggggact ctctcagcct caccccccat gacagagctg
     1921 agtgtctctt gctacgaagc gtgagacagt gccacacaca tcctggcgag tcacatatcc
     1981 tgttgcttct gttaacagca gtccctgctc ctccaaaagc atgccatatt gtataaatct
     2041 gcttctaaac tctgctttga actgtctagg gactttagat ctggacaggt cggcatctgt
     2101 aaaaagcccg tgttgacctg c
//
