LOCUS       NM_001015014            2049 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus surfeit 6 (Surf6), mRNA.
ACCESSION   NM_001015014 XM_231103
VERSION     NM_001015014.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 2049)
  AUTHORS   Romanova LG, Anger M, Zatsepina OV and Schultz RM.
  TITLE     Implication of nucleolar protein SURF6 in ribosome biogenesis and
            preimplantation mouse development
  JOURNAL   Biol Reprod 75 (5), 690-696 (2006)
   PUBMED   16855206
REFERENCE   4  (bases 1 to 2049)
  AUTHORS   Magoulas C, Zatsepina OV, Jordan PW, Jordan EG and Fried M.
  TITLE     The SURF-6 protein is a component of the nucleolar matrix and has a
            high binding capacity for nucleic acids in vitro
  JOURNAL   Eur J Cell Biol 75 (2), 174-183 (1998)
   PUBMED   9548374
REFERENCE   5  (bases 1 to 2049)
  AUTHORS   Magoulas C and Fried M.
  TITLE     The Surf-6 gene of the mouse surfeit locus encodes a novel
            nucleolar protein
  JOURNAL   DNA Cell Biol 15 (4), 305-316 (1996)
   PUBMED   8639267
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091270.1.
            
            On Apr 15, 2005 this sequence version replaced XM_231103.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091270.1, CO573694.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680433 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..2049
                     /gene="Surf6"
                     /note="surfeit 6"
                     /db_xref="GeneID:303076"
                     /db_xref="RGD:1307382"
     exon            1..133
                     /gene="Surf6"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..1104
                     /gene="Surf6"
                     /note="surfeit gene 6; surfeit locus protein 6-like"
                     /codon_start=1
                     /product="surfeit locus protein 6"
                     /protein_id="NP_001015014.1"
                     /db_xref="GeneID:303076"
                     /db_xref="RGD:1307382"
                     /translation="MASLLAKDAYLQDLAKKICAQPGPERQRSQWAVRTKGSEAAGPP
                     KKKRKKTQNKSRKQEEKTMEHKTKPLGKKSPTSSSAKKPGLSKQGSSGSLGSPEDSRG
                     TAPDSVFALDFLRQRLHEKIQMARGQGGTKELSAATLEKRQRRKQERERKKRKRRELR
                     AKQQVAEAEKKEEPVKAPPKMACKDLQESGLIFNKVEVAGEEPASKAQRKKEKRQQVK
                     GNLTPLTGRNYRQLLDRLHARQGRVEELRDQDAGKAQELEAKMKWTNLLYKAEGVKIR
                     DDERLLQEALKRKEKRRAQRQRKWEKRSEHVVEKMQQRQDKRRQNLRKKKAARAERRL
                     QKARKKGRVLPQDLERAGLS"
     exon            134..334
                     /gene="Surf6"
                     /inference="alignment:Splign:2.1.0"
     exon            335..423
                     /gene="Surf6"
                     /inference="alignment:Splign:2.1.0"
     exon            424..624
                     /gene="Surf6"
                     /inference="alignment:Splign:2.1.0"
     exon            625..2025
                     /gene="Surf6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggaccctc tgattgtagc tccagccctg gttgctaaca tggcttctct cctggctaag
       61 gatgcctatc tgcaggactt ggccaagaaa atctgcgcgc agcctggccc tgagcggcag
      121 aggagccagt gggctgtcag aacaaaaggc tcagaagctg ctggaccccc aaaaaagaaa
      181 aggaagaaaa cacaaaataa gtctcggaag caggaggaga aaactatgga gcacaagact
      241 aaacccctgg gcaagaagtc tcccacctct tctagtgcca agaaaccagg gctatccaaa
      301 caagggagct ccggctccct ggggtcccct gaagatagcc gaggcacagc gcccgattct
      361 gtctttgcac tggatttcct gagacagcgg ctgcatgaga agatccagat ggcccggggc
      421 cagggtggca ccaaggagct gtctgctgcc actctagaaa aaagacagcg gagaaagcag
      481 gagagggaac ggaagaaaag gaagcggagg gagctccgag caaagcagca ggttgcagag
      541 gctgagaaaa aggaggaacc agtcaaggcg ccccccaaaa tggcctgcaa ggatctgcag
      601 gaatcagggc tgatctttaa taaggtggag gtagctggag aggagccagc cagcaaggcc
      661 cagcgcaaga aggagaagcg gcagcaggtg aaggggaact tgacccctct gacaggcagg
      721 aactataggc agctgctgga ccgtctgcat gcccggcagg gccgggtgga ggagcttcgc
      781 gatcaggatg caggcaaggc ccaggagctg gaggccaaga tgaagtggac caacttgctg
      841 tacaaggcag agggtgtgaa gatcagggac gatgagcgcc tgctgcagga ggccctgaag
      901 cgcaaagaga agcgccgggc acagcggcag cgcaagtggg agaagcgttc ggagcatgtg
      961 gtggagaaga tgcagcagcg acaggacaag cgacgccaga acctgcgcaa gaagaaggca
     1021 gctcgggccg agcgacggct acagaaggcc cgcaagaagg gccgggtgct gccccaggac
     1081 ctggagcgtg caggcctctc ctgagagctt gcacctgcca ggttcctggc tgggcacctt
     1141 cctacctggc ttccatccat ctccatcctt gagggttgag gtggtatgtg gtgacagact
     1201 gggtctcctg tgaggttgac agttcttgca ccccacaacc aaagtgagat ctgactgcgt
     1261 gccaggacgt ttcagcagca tccttaagga agaccgtgtt tcccgttcct gagagggatg
     1321 aaggggatct gtgcccgtgt cttgtgaggg gtgtgtcact gtgtctgtat gtctgtgtat
     1381 gtctgtgttc tgaatgctcc agagttggga tagaggttgg ggtgaggtac cccactcact
     1441 ccttcctgcc cacctggtat atccaggggc catgagaaca aaaggttttg actacttgtt
     1501 ctgtatccac tagtcttggg aacagagaag agggcccaag agttttggga gaatctgatc
     1561 cagtcagata tgtctctggg ccagagcttg agagctgtgt tgaaggccag catccagctc
     1621 aaaaatctag agtccttcct gagtcccagg atgtgcttgc tcacctgtga gccagtcaat
     1681 ggctgcgact tacatgtcgc ctagttttat gtcagtttaa tacaaactgg agttgtctga
     1741 gaagagagtg cctcaactga gaaccccgct agattggcct gtggtgcttt tttttaaaaa
     1801 acaaaaaaac ctggtgaatg atatggtagg gcctggttca ttgtggctag tgccaccccc
     1861 ggactgacgg tcctgggttg tttaagaaag taggccaagc cagctgtcgg ggacaagcca
     1921 ttaagtagct tttgcttcag ttcctgcgtc taggttcctg ccctggcttc ccttggtgat
     1981 gtactgttac ctggaaatgt aacatgaagt aaaccctttc ctcaaaaaaa aaaaaaaaaa
     2041 aaaaaaaaa
//
