LOCUS       NM_001033868            2770 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus surfeit 4 (Surf4), mRNA.
ACCESSION   NM_001033868
VERSION     NM_001033868.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Mitrovic S, Ben-Tekaya H, Koegler E, Gruenberg J and Hauri HP.
  TITLE     The cargo receptors Surf4, endoplasmic reticulum-Golgi intermediate
            compartment (ERGIC)-53, and p25 are required to maintain the
            architecture of ERGIC and Golgi
  JOURNAL   Mol Biol Cell 19 (5), 1976-1990 (2008)
   PUBMED   18287528
REFERENCE   2  (bases 1 to 2770)
  AUTHORS   Breuza L, Halbeisen R, Jeno P, Otte S, Barlowe C, Hong W and Hauri
            HP.
  TITLE     Proteomics of endoplasmic reticulum-Golgi intermediate compartment
            (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies
            ERGIC-32, a new cycling protein that interacts with human Erv46
  JOURNAL   J Biol Chem 279 (45), 47242-47253 (2004)
   PUBMED   15308636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB703892.1, CK358924.1, CO558944.1, CB812667.1, CA339301.1 and
            BQ192594.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EV774718.1, FQ113710.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760476 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-346               CB703892.1         13-358
            347-783             CK358924.1         281-717
            784-1312            CO558944.1         105-633
            1313-1547           CB812667.1         124-358
            1548-2143           CA339301.1         32-627
            2144-2770           BQ192594.1         1-627               c
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..2770
                     /gene="Surf4"
                     /note="surfeit 4"
                     /db_xref="GeneID:619346"
                     /db_xref="RGD:1561980"
     exon            1..167
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..929
                     /gene="Surf4"
                     /note="surfeit locus protein 4-like"
                     /codon_start=1
                     /product="surfeit locus protein 4"
                     /protein_id="NP_001029040.1"
                     /db_xref="GeneID:619346"
                     /db_xref="RGD:1561980"
                     /translation="MGQNDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRM
                     WFQWSEQRDYIDTTWSCGYLLASSFVFLNLLGQLTGCVLVLSRNFVQYACFGLFGIIA
                     LQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSEGKSMFAGVPTMRESSPKQYMQLG
                     GRVLLVLMFMTLLHFDASFFSIIQNIVGTALMILVAIGFKTKLAALTLVVWLFAINVY
                     FNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLVVALGPGGVSMDEKKKEW"
     exon            168..354
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
     exon            355..431
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
     exon            432..475
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
     exon            476..662
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
     exon            663..2753
                     /gene="Surf4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctacgtggca gccgctagag cagccgcggc tcagcgaggc cggccgccgg gtacttcctg
       61 tggaggccgc agcaggcgcg agcgcccagg acctgccagc tgagccttcc gccgccgcca
      121 tgggacagaa cgacctgatg ggcacggccg aggatttcgc cgaccagttc cttcgagtca
      181 ccaagcagta cctgcctcat gtggcacgcc tctgcctgat tagcaccttc ctggaagatg
      241 gcatccgcat gtggttccag tggagtgagc agcgcgacta tattgatacc acctggagct
      301 gtggttacct gctggcctca tccttcgtgt tcctcaacct gctgggacag ttgactggct
      361 gtgttttggt gctgagcagg aacttcgtgc agtatgcctg ctttgggctg tttggaatca
      421 tcgcacttca gacaattgcc tacagcattt tgtgggactt gaagtttctg atgaggaacc
      481 tggctttagg aggaggtttg ctgctgctct tggcagagtc tcgctcagaa gggaagagca
      541 tgtttgctgg tgtccccacc atgcgtgaga gctcccccaa gcagtacatg cagcttggag
      601 gaagggtcct gctggtcctg atgttcatga ccctccttca ctttgatgcc agcttttttt
      661 ctatcatcca gaacattgtg ggcacagctc tgatgatctt agtagccatt ggttttaaaa
      721 ccaagctggc agctttgact ctcgtcgtct ggctgtttgc catcaacgtg tacttcaacg
      781 ccttctggac aatcccggtc tataagccca tgcatgactt cctgaaatat gacttcttcc
      841 agaccatgtc agtgattgga ggcctgctcc tagtggtggc tcttggccca gggggtgtct
      901 ccatggatga gaagaagaaa gagtggtaac agacagatcc ctcccctccc tggctgaggc
      961 acaaggccct ggactggttc agggtagagt caacaaactg ccagcattta tgtgtccttt
     1021 ccccttcccc tcccttggta aaggcacaga tgttttgaga actttatttg cagacacctg
     1081 aaaatcgaag gtaaaatctt ctttggaaat agtctggagt ctgactgtcc agggctggcc
     1141 agctggatgg tcactcctta cttagctaag gcttggaata gacagtgtgg tgggctgtgg
     1201 cctcatgcct cctgtctcag ttccttttgg gggtgaggga cttcaagtca tgctgagctg
     1261 taccttatca ttcaaagcag tgtcccttct tagttttaag tttacatcct tagctcaaac
     1321 tagtaaatga cttaggatgg tccagccaaa caccaaacag ttaaacctcc agttcagatt
     1381 tctaccagtg gccccagcat tgcttctgcc cctgtatttt ataggatcaa tgaagacatt
     1441 agagaaaccc caagtcaaga gaacagtaca gtattggaag ggtgggtgct actgctggcc
     1501 caagtccttg atgttagctg gctggatgct ttttactggg tgaaaggtac cctgggagtt
     1561 ttcatggctc caagcaggga tgggatgggg taagcggcag gaagttctta gaaagctgct
     1621 atccctcaag cctggtggta gaaagggcag gagagcaagc tgctcacagg atggcccaca
     1681 accaccatgg aaccagcctg ggtacagtga tgccatgggg cccagaagtg aggagccccc
     1741 atattcaaga cacccaggct caacccagtt acctcacact tgaccgtctc agagcaaggc
     1801 ctgaactcca caggttctgc tccccccaat cccctagctt aacttcctgt tccaggctga
     1861 gcttacccca tcgacagccc tgaggccacc atttccctga ggctgttgct tgctcagact
     1921 tttgtcaact tgctctgctg gatgcagcca agatactttt tacatttgtg atgccttacc
     1981 aatttgatct cagtcctgta tttaaagttt tctaacattg ccttacaacg tgtttctctt
     2041 tttgggggag gggtggggtg tctaatgctg tggtcttgct catctgcatg gtagtgccat
     2101 gagtgtagtt gggttcctcc tggatctctt ccaggtatac tggagggaac agacagacag
     2161 gcttagaacc cctggaggga agctggcagc ttacctcccc cttgggtaca gtcttggagg
     2221 tcctgctttc tggcatcagc tgggtgggca ggactgttct ctgagtcacc ttaggtctgt
     2281 cccttgcctg gctggctctg cagtctgaat ccaccttctc agcacctggc ccgtgtccta
     2341 ctgcagccgt ctggcctgct gacttcccta agtgagctcc agcagtggcc caggccatgc
     2401 tgtttcttta ccactcagct gcttgacaag cagagctgcc tcagggtgca cccacctgca
     2461 gtgcagcccc ctgacattcc aatgtggagt gggaggcaag tgcatgcctt gcagcagtag
     2521 ccctcacccc aagggtaccc cagcccattt accagctttc tgtgggctat gcctgggatg
     2581 ggagaaaaaa aaaaaaacaa cacataatgg tttggcaaaa gttttctgaa aatgctttag
     2641 ctttatgtgg gaataggtat aaacctcatt tttatgctgt attttatatc ttagttgtgt
     2701 ttgaaatgtt ttgatctttg gaaacatcaa aataaataat ggcatttggt gtaaaaaaaa
     2761 aaaaaaaaaa
//
