LOCUS       XM_006233723            1183 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus surfeit 2 (Surf2), transcript variant
            X1, mRNA.
ACCESSION   XM_006233723
VERSION     XM_006233723.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233723.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006233723.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1183
                     /gene="Surf2"
                     /note="surfeit 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 ESTs, 2 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 246
                     samples with support for all annotated introns"
                     /db_xref="GeneID:619345"
                     /db_xref="RGD:1565817"
     CDS             45..803
                     /gene="Surf2"
                     /codon_start=1
                     /product="surfeit locus protein 2 isoform X1"
                     /protein_id="XP_006233785.1"
                     /db_xref="GeneID:619345"
                     /db_xref="RGD:1565817"
                     /translation="MASPIMDEPPSDVLAFLRQHPSLRLLPNTHKVRCSLTGHELPCR
                     LPDLQVYTSGKKYQRLSSAFSAFDYTAFEPHIVPSTKNRHQLFCKLTLRHINKSPEHV
                     LRHTRGRRYQRALQKYEECQKQGVEYVPACLLHKRKKREDQMDVDDLPGQRTEFWEPT
                     SSDEGGALSDDSMTDLYPPELFTERELLKPEDFQTDQQEKPKQSEKSTAQREAKVGHK
                     RGRKLRKELTPLTKKFKSHHHKPKNFSSFKQLGS"
ORIGIN      
        1 cttccgggac cgcgctccgc ctcacgtggt ggctgtggcg tcagatggcg tctccgatca
       61 tggacgaacc accttctgat gtgcttgcat ttctgcgtca gcaccccagc ttgagactgc
      121 tgcccaacac ccacaaggta cgctgctcgc taaccggtca tgagcttccc tgccgtctgc
      181 cggacctcca agtctacact agcggcaaga agtaccagcg gctctcaagt gccttctctg
      241 ccttcgatta cacagcgttc gagccacaca ttgtgcccag cacaaagaat cggcaccaac
      301 tgttctgcaa actcaccctg aggcacatca acaagtcccc agaacatgtg ctgaggcaca
      361 ctcggggccg gaggtatcag agagcacttc aaaaatatga agagtgtcag aaacaagggg
      421 tggagtatgt gcctgcctgc cttctacaca agaggaagaa gagggaggac cagatggatg
      481 tcgatgacct cccaggccag agaacagaat tctgggaacc aacttccagt gacgagggag
      541 gcgccttgag tgatgacagc atgacagacc tatacccacc tgagctgttc acagagagag
      601 aactgctcaa gcctgaagac tttcagacag accaacagga gaagcccaaa cagtcagaaa
      661 agagcactgc acagagagaa gccaaagtgg gccacaagag gggccgtaaa ctcaggaagg
      721 agctcacccc gttgaccaag aagttcaaaa gccatcatca caagcccaag aacttcagtt
      781 cctttaagca gctagggagc tgaagcctgt aaagaaagcc tttgggtgtc cttggaactg
      841 gccactgatg tcctgacact ggctgctgtc cagagtgggc ctggaggttc tgttcagaag
      901 atggcatcag cggggttgaa gattcctctc catgcatggc tttcttcata gtgttcagtg
      961 acccttgctg tagcttactg tagcatcctg agcctggcca ggtccccagc cctggctggt
     1021 caccacatag gaccacactg tacaccaaat gccattattt attttgatgt ttccaaagat
     1081 caaaacattt caaacacaac taagatataa aatacagcat aaaaatgagg tttataccta
     1141 ttcccacata aagctaaagc attttcagaa aacttttgcc aaa
//
