LOCUS       NM_001408858            4499 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus SUPT20H like 2 (Supt20hl2), mRNA.
ACCESSION   NM_001408858 XM_039100428
VERSION     NM_001408858.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jun 29, 2022 this sequence version replaced XM_039100428.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               JAXUCZ010000021.1  62647113-62647242   c
            131-4499            JAXUCZ010000021.1  62639354-62643722   c
FEATURES             Location/Qualifiers
     source          1..4499
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..4499
                     /gene="Supt20hl2"
                     /gene_synonym="Fam48b1; RGD1565951"
                     /note="SUPT20H like 2"
                     /db_xref="GeneID:314107"
                     /db_xref="RGD:1565951"
     exon            1..130
                     /gene="Supt20hl2"
                     /gene_synonym="Fam48b1; RGD1565951"
                     /inference="alignment:Splign:2.1.0"
     exon            131..4499
                     /gene="Supt20hl2"
                     /gene_synonym="Fam48b1; RGD1565951"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..2844
                     /gene="Supt20hl2"
                     /gene_synonym="Fam48b1; RGD1565951"
                     /note="rCG36303-like; transcription factor SPT20 homolog;
                     family with sequence similarity 48, member B1"
                     /codon_start=1
                     /product="SUPT20H like 2"
                     /protein_id="NP_001395787.1"
                     /db_xref="GeneID:314107"
                     /db_xref="RGD:1565951"
                     /translation="MEQHLAEALEQTDDIIETVQQEPPPANPVPSGEKSLHEKLYDIY
                     VEECEKEAEVEGLRSNVNLLEKLMRREALPCLVVNLYPENQGYSLMLKDKEGVLIEPF
                     PVPYLGQKLLEYLDAEELPSFLIDVLEKSPVNVFHHGCVIAEIRDYRQCSDIHPPREL
                     GAEPAVSSDVSSAASSAETSAELSAESSAVASDVSSASSTPAYQTRHILLRPTMQSLV
                     SDVESITSDNRQWTEEEKLELESQLILATAEPLCLDPSVAVACTANRLLFNQQKMMTD
                     SMRQCFTSHEWPYLELEEEQYICTTPPDVSTMVACRKQVETKQGDQYDLKIAEAGKCV
                     DTWKQRACEPEAPREVDVHKYARGKQMAPCDDAESTAWPLPEVNDYPFECEEGSQQWE
                     PKPSTSTAQSLSDPFFSPEVRLPTEGRCDSQMYLPQVAPSDHSDDGSVAGERIEPGKA
                     MGVGQESVQSTAECLGKILQGSTDSIHLGQPSLGKKATSQSVSSPAVETRIKSPAPLL
                     TQPSTSGQGSSAVSSSSISVRGRKLPRLAPSPKSAGQAQQTFWGVSSVNTLPSAAQSS
                     ARSTGSSPVIQGPSSGTGQNVINLLGLAQRAPVLMNSPSRVLSFPTGARASTETSSRG
                     FLPPRSQMLSTQTRTPQRSVQTSVKLIVKNTSGPVTVRLPPGSVILHPELQAQRQQPW
                     PQLQQPQQQPWPQLQQPQQQPWPQPQQPQLQTWPQTQQPQQQPWPQPQQPQQQPWLQQ
                     PRPQQYVQPELQRQKQLEPLYVLIPKQHQPPRAPVPPRPVPPACPQRSNIQQWALSAQ
                     QSGLLNLAEAGRVRQPQATVVCQLGSTQQSHGHNLPSQSFQYPAARVQQLQARGQNVQ
                     LRFMPRRVAMPRAAIQQTHQGHTGGQYRGTGRGEPPTAPDS"
ORIGIN      
        1 ccctgcttcg cagtgaggag cttgaagttt gggccgttgg ctcagtcggc tggcagccgt
       61 tggccggcat agacgctcct gttcacttcg ctgtggagga ctcagagagc agcggcagtt
      121 atacctacag ggccctgact gcctgttaag atggaacagc atctagctga ggctttggag
      181 cagacagatg atattattga gactgtccag caggagcctc ctccagccaa cccagtgcct
      241 agtggggaaa aatctcttca tgaaaaactg tatgacattt atgttgagga atgtgaaaaa
      301 gaggcagagg tagagggcct tagaagcaat gtcaacttgc tagagaagct tatgaggaga
      361 gaggcgttgc catgtttagt ggtcaacctg tacccagaaa atcagggcta ttctctcatg
      421 ctgaaggaca aagagggagt tcttattgag ccctttccag tgccttattt aggacagaaa
      481 ctacttgaat acttggatgc tgaagagtta ccttcttttc tgattgatgt cctggaaaag
      541 tctcctgtga atgtttttca ccatgggtgt gtcatagcag aaatcagaga ctacagacaa
      601 tgcagtgaca tccacccccc tagggagctt ggtgcagagc ctgctgtgtc atctgatgtg
      661 tcctctgctg catcatctgc tgagacatct gctgagttgt ctgctgagtc atctgctgtg
      721 gcatctgatg tgtcctctgc ttcctcgact cctgcttacc aaactcgaca cattctctta
      781 cgtcccacga tgcagagtct agtaagcgat gtagagtcca ttacaagtga taaccgtcag
      841 tggactgagg aagaaaaact tgagcttgag agtcaactga ttttagctac agcagagcca
      901 ctgtgtctgg atccctctgt tgctgttgcc tgcacagcca acagactgct gtttaatcag
      961 cagaagatga tgacagactc tatgagacaa tgctttacga gtcacgagtg gccctatcta
     1021 gaactggagg aagaacaata tatatgtaca actcctcctg atgtttcaac aatggttgct
     1081 tgcagaaaac aagtagaaac aaaacaaggt gatcaatatg atctgaagat tgctgaagca
     1141 ggaaagtgtg tagacacgtg gaagcagaga gcctgtgaac cggaggcccc cagagaagtg
     1201 gatgtgcata aatatgctag agggaagcaa atggcgccct gtgatgatgc agaatcaaca
     1261 gcctggccac ttcctgaggt aaatgattat ccatttgagt gtgaagaggg cagtcagcag
     1321 tgggaaccta agcctagtac aagtacagca cagtccctta gtgacccatt tttctctcct
     1381 gaagtaaggc taccaacaga gggtagatgt gatagccaga tgtatcttcc ccaggttgcc
     1441 ccaagtgatc attcagacga cggttctgta gctggggaaa ggattgagcc tgggaaggca
     1501 atgggtgttg gccaggagtc tgtccagagc acagctgaat gtctaggcaa aatactgcag
     1561 gggtctactg actccatcca tcttggtcag ccctccctag ggaagaaggc cacatcccaa
     1621 tcagtgtcat ctccagccgt ggagacaaga attaagtccc cagctccatt gctcacacaa
     1681 ccctccacct caggacaggg ctcttcagca gtcagttctt cctcaatatc tgtcagaggt
     1741 aggaagcttc caagacttgc tccttctccc aaatcagctg gccaggctca gcaaaccttt
     1801 tggggagtga gcagtgttaa caccctgcct tcagcagccc agtcctctgc ccgctcaaca
     1861 gggagcagtc cggtcatcca aggccccagc agtggcactg gccaaaacgt tatcaatttg
     1921 cttggcctag cacagagagc ccctgttttg atgaatagtc catcccgggt gttgagcttc
     1981 cccactggtg cccgagcatc tacagaaacc tcttctagag gctttctgcc tcccagaagc
     2041 cagatgctca gtacccagac tagaacacca cagcgctcag tgcagacatc agtgaaatta
     2101 attgtaaaaa atacctcagg tcctgtaact gttaggcttc caccaggctc tgtcattttg
     2161 cacccagagt tacaagcaca gcggcagcag ccatggccgc agctacagca accacagcag
     2221 cagccatggc cgcagctaca gcaaccacag cagcagccgt ggccacagcc acagcaacca
     2281 cagctgcaga cgtggccgca gacacagcaa ccacagcagc agccgtggcc acagccacag
     2341 caaccacagc agcagccgtg gttgcagcag cctcggccac agcagtatgt acaaccagag
     2401 ctgcagaggc agaagcagtt agagcctttg tatgtattga ttccaaaaca gcatcagcca
     2461 cctagggccc ctgtccctcc aagaccagtg ccaccagctt gcccccagag gtctaacatt
     2521 cagcagtggg cactgtcagc tcagcaaagc ggtctcctta accttgctga ggctgggagg
     2581 gttcgtcagc ctcaggcaac tgtggtatgt cagctaggct ccactcagca gagtcatggg
     2641 cataatcttc cttcacaaag cttccagtac cctgctgccc gggtacaaca gctgcaggct
     2701 agaggccaga atgtgcagct gagattcatg ccacgtagag tggctatgcc cagagcagcc
     2761 attcagcaaa ctcatcaggg acacacaggt ggccagtata gaggtacagg gaggggagaa
     2821 ccaccaactg ccccagactc ttaagtcttg ccttagtctc cctttctcaa aatatgcact
     2881 agtgttgagc taaatcaatt ttcagttttt acttcatatt tttggtgttt tcaatgtgcc
     2941 aaggttttat agctaaaagt tttacataga actcagaagg ggacttttta aactactgct
     3001 attttacttg ctattttact agtgctattt ttgttgttga taaagtcaag tttattgtaa
     3061 tgtcctgatg tatatctaca tctaaactag gttaatttta gtttttttca gactgacagt
     3121 tctctaatta ttaaaattgc aacagtacac tttaataatt tggaggctta tttgtaaatg
     3181 gtgattaaaa acatgcattt tgctgtttta actatttttt ttgagggaca gggtttctca
     3241 cagtacctgt gactgcactg gaactcactg catagatcag gctgacctca aactcacaga
     3301 gatccacctg cagcctctgc ctcctgactg ctgggattaa atgtgggtac caccaacact
     3361 tgccctgttt taataagttt aaggatgcag ctcagtatat tagtaagtac aatcccattg
     3421 tagtgcaaaa acattctaga acctttttgt tttgggggat tgaaactaca cctgttaacc
     3481 atcaattccc catttcctat ccccaccctt tgcttcccga acccttctac ttttggcaca
     3541 atgtcaccaa gattcatatt gttgtgcctt gtgatagaag gtcatagctt tgtaaaactc
     3601 atttccctgt cttaaataca taagaacttg acttgtgaac caggagaaat ctttcaagag
     3661 aacttggttg gtatttcttt agattcaaag gcttgagtgc agtgtctgaa atgtgattga
     3721 tgtgaatgca ctatgaaaaa ctaatatatt ttttgtttga ttttggagac agggtttttc
     3781 taggtagctc tggttgtcat gaactcactg tgtagaccag ggtggcccga aactcacaga
     3841 tgtccacctg cctctgtctc cggagtgctg atggtaaagg tgtgaaccac cacctggcct
     3901 gattagggtt gtcacactga aattgaggac agccgaggcc tgcagtcctg tgcaagggag
     3961 cccatggcag ccttgtctga tgagcatccc agtcctcgga aggtttgccc tgcagccagt
     4021 gctctggcag accccagctc ccctccaggc cctaccactg gcctggaaaa ggccatctgg
     4081 gctggctcgc tgtggctctc cttgtgaagc cacttacatg ttttagaaca ttctaggtca
     4141 atggcacaga ggatataagc aagcacttag aacttggtct tgcagactgg ttcttcattg
     4201 cccacagctg tctgaggctg ttaagtgggc tcctctgctc ccatccccat cccgtttact
     4261 cctcatcaat tgttccacac tccctgcctg ctcaccccat ctcagtgtcc ttgtttcagt
     4321 ggactgggct gctctgccct tagaggattg aggtttatca gttctgtaac aaacatctgt
     4381 ccacatgaag gtgcagttcc ttagcattcg tgacattggc aatgctgtgc agccagccct
     4441 ctgtgtgttt ccaaaacatg ctcggcactt caaagaagtc ctggacccat taagcacta
//
