LOCUS       XM_006251471            1456 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Sad1 and UNC84 domain containing 3
            (Sun3), transcript variant X1, mRNA.
ACCESSION   XM_006251471
VERSION     XM_006251471.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006251471.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006251471.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1456
                     /gene="Sun3"
                     /note="Sad1 and UNC84 domain containing 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:498412"
                     /db_xref="RGD:1591975"
     CDS             37..1272
                     /gene="Sun3"
                     /codon_start=1
                     /product="SUN domain-containing protein 3 isoform X1"
                     /protein_id="XP_006251533.1"
                     /db_xref="GeneID:498412"
                     /db_xref="RGD:1591975"
                     /translation="MVWCGEQVRVRKRKVLLSPGSLGAADRLARWEQRLQGQSQRARG
                     STRLQLTHLQTPYAQELARPLRSHGSTVSTLNTQEEHMRQNIQPERIQLTGSWKIILS
                     TVFASTFLLVGLLNHQWLKETEFPQKPRQLYTVIAEYGSRLHNYQARLRMPKEQQELL
                     KKESQTLENNFREILFLIEQIDLLKALLRDMKDGVHNHSWPAQREAVQDQATAEVLDE
                     EMSNLVHYVLKKFRGDQIQLADYALKSAGASVIEAGTSESYKNNKAKLYWHGIGFLNY
                     EMPPDMILQPDVHPGKCWAFPGSQGHILIKLARKIIPTAVTMEHISEKVSPSGNISSA
                     PKEFSVYGVTKKCEGEEMFLGQFIYKKMEATIQTFELQNEASESLLCVKLQILSNWGH
                     PKYTCLYRFRVHGIPSDHT"
ORIGIN      
        1 taagaggtgc tctgcacctc cttgctggtg ttcctcatgg tctggtgcgg tgagcaagtc
       61 cgcgtccgga agagaaaggt gctgctaagc cctggttctc tgggagccgc cgaccgactg
      121 gcccgatggg agcagaggct gcaggggcaa agtcagcgcg ctcgtggttc cacccgcctc
      181 cagctgacac acctgcagac gccttacgcc caggagctgg cacggccact gcgctcacac
      241 ggcagcacgg tgtccacgct gaacacccag gaggagcaca tgcgccagaa tatacagcca
      301 gagcgcattc agttaactgg atcatggaag attatcctaa gtacagtgtt tgcatcaact
      361 tttcttcttg ttggacttct aaatcatcag tggcttaaag aaacagagtt tcctcaaaaa
      421 cccagacaat tatacactgt cattgcagaa tatggctccc ggctccacaa ttaccaggcc
      481 agacttcgca tgcctaagga gcaacaggaa cttttaaaga aggaaagcca gactttggag
      541 aacaattttc gtgaaattct gtttttaatt gaacaaatag atcttctgaa ggcgttgctt
      601 agagacatga aggacggcgt acacaatcac agctggcctg cccaacgaga agctgtgcag
      661 gaccaggcca ctgctgaagt tctagatgag gaaatgtcaa acttggtaca ttatgtactt
      721 aaaaagttca gaggggacca aatacagctg gctgattatg ccctgaagtc agctggagcc
      781 tctgtcattg aagctgggac ttcagagagt tacaaaaata ataaagcaaa actgtactgg
      841 catgggatag ggttcctcaa ctatgagatg cctccggata tgattcttca gccagatgtc
      901 caccctggaa agtgctgggc ctttccgggt tcccagggtc acatcctgat taagctggcc
      961 aggaagatca tcccaacagc agttaccatg gagcacatct cggagaaggt gtccccttca
     1021 ggaaacatct cgagtgcacc gaaggagttc tctgtctatg gtgttaccaa gaagtgtgag
     1081 ggagaagaaa tgttcctagg tcagtttatt tataagaaga tggaagcgac cattcaaaca
     1141 tttgagctcc agaatgaagc ttctgaatct ttgctatgtg tgaaacttca gattcttagc
     1201 aactggggac atccaaagta tacttgtttg taccgattta gagtccatgg catccccagt
     1261 gatcacactt agaggagctg gtgcagaagg caggggctgt gcagccagaa tgtccaagga
     1321 tgtttattat tcccttatgt catattgcac ccctaagaat caaagattgg gagtgggagg
     1381 gaaaccccaa actcattcct actaggcagt aagaagtgaa tgaattttac taataaaaaa
     1441 atgaaagtca atccaa
//
