LOCUS       XM_006242045            3805 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Sad1 and UNC84 domain containing 2
            (Sun2), transcript variant X1, mRNA.
ACCESSION   XM_006242045
VERSION     XM_006242045.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 2, 2024 this sequence was replaced by
            NM_001427688.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006242045.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3805
                     /gene="Sun2"
                     /note="Sad1 and UNC84 domain containing 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 65 ESTs, 7 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 235 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:315135"
                     /db_xref="RGD:1563141"
     CDS             245..2437
                     /gene="Sun2"
                     /codon_start=1
                     /product="SUN domain-containing protein 2 isoform X1"
                     /protein_id="XP_006242107.1"
                     /db_xref="GeneID:315135"
                     /db_xref="RGD:1563141"
                     /translation="MSRRSQRLTRYSQDDNDGSSSSGASSVAGGQSTVFKDSPLRTLK
                     RKSSNMKRLSPAPQLPPPSDSHTSYYSESVVRESYIGSPRAVSLARSALLDDHLHSEP
                     YWSGDLRGRRRRGTGGSESSKANGLTMENKASEDFFGSSSGYSSEDDLAGYTDSDQHS
                     SGSGLRSAASRAGSFVWTLVTLPGRLFGLLYWWVGTTWYRLTTAASLLDVFVLTRSRH
                     FSPNLKSFLWFLLLLLLLTGLTYGAWHFYPLGLQTLQPAVASWWAAKESRRQPEVWDT
                     RDASSHLQAEQRILSRVHSLERRLEALAAEFSSNWQKEAIRLERLELRQGAAGHGGGS
                     SLSHEDALSLLEGLVSRREAALKEDLRRDTVARIQEELATLRAEHHQDSEDLFKKIVQ
                     ASQESEARVQQLKTEWRSMTQEAFQESSVKELERLEAQLAGLRQELAALTLKQNSVAD
                     EVGLLPQKIQAARADVESQFPDWISQFLLRDRGARSGLLQRDEMHAQLQELENKILAN
                     MAEMQGKSAREAAASLGQTLQKEGIVGVTEEQVHRIVKQALQRYSEDRIGMVDYALES
                     GGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFA
                     VVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGTFAYDQ
                     DGEPIQTFYFQASKMATYQVVELRILTNWGHPEYTCIYRFRVHGEPAH"
ORIGIN      
        1 tgtcagcctt gactgacagg cgcacacata cacactcggc cacgcgcgca ccgccctgcc
       61 ccactcgcgc agcgcgggcc tccgccggcc gcattgtccc gcgtctccgc tctgcgctca
      121 tctcagcctc agcctcagcc tcgggaccgg cccggcccag cgcgcggcgc cgcccgggga
      181 accccgacac gggaacagcc acggaagtct ttcttcagga gaagagtccc cactctgcct
      241 catcatgtca agacgaagcc agcgcctcac gcgctactcc caggatgaca acgatggtag
      301 cagcagcagt ggtgcaagct ccgtggcagg aggccagagc accgtgttta aagacagtcc
      361 tctcaggact ttgaagagga aatccagcaa catgaagcgc ctgtccccag ctccgcagct
      421 gccccccccc tctgactccc acacctccta ctacagcgag tctgtggttc gggagtccta
      481 cataggcagc ccccgggctg tgtcccttgc cagaagcgcc ctcctggatg accacctaca
      541 cagtgagccc tactggagtg gggaccttcg ggggaggagg aggagaggaa caggcggctc
      601 tgagagcagc aaagccaatg ggctcaccat ggagaacaag gcctcagagg acttttttgg
      661 ctcttcctca ggctactctt ctgaggatga ccttgcaggc tacacggact cagaccagca
      721 cagttcaggg tcagggttaa gaagtgcagc atctcgggcc ggctcctttg tctggacgct
      781 ggtcactctt ccaggccgcc tctttggtct tctctactgg tgggttggca ccacctggta
      841 ccgtctgaca acagctgcct ccctcctgga tgtcttcgtc ctaaccaggt ccaggcactt
      901 ctcaccaaac ctgaagagtt ttctgtggtt cctcctgctc ttgctactcc tgactggtct
      961 gacctacggg gcttggcatt tttacccctt agggctccag acactgcaac ccgctgtggc
     1021 ctcctggtgg gcagcaaagg agagtaggag gcagccggag gtgtgggaca ccagggatgc
     1081 ctcctcgcac ttgcaggctg agcagcgcat tctctcccgg gttcactctc tggagcggcg
     1141 cctggaagcc cttgctgctg agttttcctc caactggcag aaggaggcca tacggctgga
     1201 gcgcttggag ctgcggcagg gggctgctgg ccatggagga ggcagtagcc tgagccatga
     1261 agatgccctg tctctcctag aagggttggt gagccgccgg gaagctgccc tgaaggagga
     1321 cttgcgcagg gacacagtgg ctcgtatcca ggaagagctg gctaccctga gggcagagca
     1381 tcaccaggac tcggaagacc tattcaagaa gatcgtccag gcctctcagg agtctgaggc
     1441 ccgtgtccag cagctgaaga cagaatggcg aagcatgacc caggaggctt tccaggagag
     1501 ctctgtgaag gagctggagc ggctggaagc ccaactggcc ggtctgaggc aggagctggc
     1561 tgccctaact ctgaagcaga actcggtggc agatgaagtg ggcctgctgc ctcagaagat
     1621 ccaggctgcc agggctgatg tggaatccca gttccctgac tggatcagtc agttccttct
     1681 tcgagatagg ggcgcccgca gcgggctcct gcagagagac gagatgcatg ctcagctgca
     1741 ggagctggag aacaagattc ttgccaatat ggctgaaatg cagggcaagt cagccaggga
     1801 ggccgcagct tctctgggac agacactgca gaaagaaggc atagttgggg tgacagagga
     1861 gcaagtgcac cggatcgtca agcaggccct gcagcgctac agtgaggacc gtattggaat
     1921 ggtggattat gccctggaat caggaggagc cagtgtcatc agcacccgtt gttctgagac
     1981 ttacgagacg aagacagccc ttctcagcct ctttggcatc cccttgtggt accactccca
     2041 gtcaccccga gtcattctgc agccagatgt gcacccaggc aactgctggg cattccaggg
     2101 gccccagggc ttcgcagtgg tccgcctctc tgctcgtatc cgccccacag ccgtcacctt
     2161 agaacacgtg cccaaggcct tgtcacccaa cagcacaatc tccagtgctc ccaaggactt
     2221 cgccatcttt ggctttgatg aagacctgca gcaggaaggg acacttttgg gcacgtttgc
     2281 ctacgaccag gatggggagc ccatccagac cttctacttc caggcctcta agatggccac
     2341 ataccaagtt gtggagcttc ggatcctgac caactggggc caccctgaat acacctgtat
     2401 ctaccgcttc cgggtgcacg gagagcctgc ccactagccc tatgagatct tgtgcctgtt
     2461 gctagccacg tgggaggctc accgttccca gcatctaccc ctgctctgag agtaggtgca
     2521 cagcacccca ccactgcccg cacatgcttg ttagcgctga cttccaggag caagagcaaa
     2581 ggcagcatgt gtaggactcc ctgcataagc taaacagccc gaggctgcct acaggctcct
     2641 gtgcctctta atcttccccc tagagctagg cgcctacgag ggtgtatata tgtagcatac
     2701 tttggggagt ctgcgagtca ggaagtgagg tggagggact ggcaccggtg aactcccggt
     2761 aggtgccaaa gccacgcgca taccaagcca gagtcccagg gataagctgg gggtcttgtg
     2821 gccttttagg acagtgctta gcactatgcg gctggactgt ccctggcagg tgcctggtaa
     2881 aggactcaga ggctgctgtg cgcctccagc atgggaggta ccatggccca taggacccct
     2941 ggggtttctt gcaaactgga cggagccagc tcctgtgtgc ctctgaggac tgctgtctgt
     3001 gccaacctgg gagtcccagt gctggggacc attgcttttc cccctgatgt gggtgagggt
     3061 ctattctgtt cccattcctg ctgcatcctg cctgtgtgcc acagcaagct tcccactccc
     3121 cagggaagga cctagccctc tgtctttggg gcgttctagc agcgtagtct agagagggga
     3181 gatgactggg ggttctcctg atccagtgcc aatagccaca gtgtggttca agatatcagg
     3241 tagaggggct acactagccc accccactta agagtggccc tgtccactct aaagcagccc
     3301 ccttgggctc tcagcttttg cttagattgt ttcctttctg gctcctccat ggtggcagtt
     3361 ggatggggtt gagagggagg gaggctggca gaagttacct tgtgtgggga ggaggaagag
     3421 gcttttagat tgaattgccc tgttgtatta tatagaattc tcaaggtctg tttttgttgt
     3481 tgttttgttt ttaactgaaa aagctacagg cttgatttct agccccattc tgaggggcac
     3541 cagctgttac ccagtttcta gttcctggct ctgagaggag ctcggtcctg cctggtctat
     3601 ggaagggcca ggaggagctg caagcagagg cccattaagt gttctggtga actggcaacc
     3661 tgtacagccc tgccctcagg gcttgttttg cgctctcctg tcacaaatgc tgcactgttg
     3721 attctttcaa aacaaaacaa atcaaacctc tccagactct aatttatgcc tatgcaaaaa
     3781 ataaaggatg cccaggatca atgga
//
