LOCUS       XM_008768984            4018 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Sad1 and UNC84 domain containing 1
            (Sun1), transcript variant X17, mRNA.
ACCESSION   XM_008768984
VERSION     XM_008768984.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008768984.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008768984.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4018
                     /gene="Sun1"
                     /gene_synonym="Unc84a"
                     /note="Sad1 and UNC84 domain containing 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 ESTs, 5 long SRA reads, 16 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 129 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:360773"
                     /db_xref="RGD:1359142"
     CDS             152..2749
                     /gene="Sun1"
                     /gene_synonym="Unc84a"
                     /codon_start=1
                     /product="SUN domain-containing protein 1 isoform X9"
                     /protein_id="XP_008767206.1"
                     /db_xref="GeneID:360773"
                     /db_xref="RGD:1359142"
                     /translation="MSRRSLRLITTTAAYSSGDGQTVDTHISTSRATPAKGRETRTVK
                     QRSASKPAFSINHLSGKGLSSSTSHDSSCSLRSATVLRHPVLDESLIREQTKVDHFWG
                     LDDDGDLKGGNKAATQGNGELAAEVASSNGYTCRDCRMLSARTDALTAHSAVHGPTSR
                     VYSRDRTLRPRGASFYLDRTLWLAKYTSSSFASFIVQLFQVVLMKLNFESETYKLKGY
                     ESRAYESQSYETKSHESEAHLGHCGRMTAGELSRVDGESLCDDCKGKKHLETHTTTHS
                     QLSQPHRAAGAMGRLCTYTGDLLVRALRRTRAAGWSVAEAMWSVLWLAVTAPGKAASG
                     TFWWLGSGWYQFVTLISWLNVFLLTRCLRNICKVFVLLLPLLLLLGAGFSLWGQGNFF
                     SLLPMLNWTAMQPAQRVDNPKDMHRPGPLSPSPPLKVDPMASQWPQESDMGQKIASLS
                     AQCHNHDERLAELTVLLQKLQIRVDQVDDGREGLSLWVKDMVGQHLQEIGSIEPPDAK
                     TDFLTLHHDHEVRLSSLEDVLRKLTEKSEAIQKELEETKLRAGSRDEEQPLLDRVQHL
                     ELELNLLKSQLSDWQHLRSSCEQADARIQETVQLMFSEDQPGGSLEWLLQKLSSRFVS
                     KDELQVLLHDLELKLLQNITHHITVTGQAPTSEAIVSAMSQAGISGITEAQAHIIVNN
                     ALRLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALLSLFGVPLWYFSQSPRVVI
                     QPDIYPGNCWAFKGSQGYLVVRLSMKIYPTTFTMEHIPKTLSPTGNISSAPRDFAVYG
                     LETEYQEEGQPLGRFTYDQEGDSLQMFHTLERPDQGFQIVELRVLSNWGHPEYTCLYR
                     FRVHGEPIQ"
ORIGIN      
        1 attggctgta gatgtggaga gtcttcgttc cccggcctgg gcggtgcgga cgaggcctga
       61 ggcggcggcg cgaggcagtt ctagttattc ttcggatgct ctggattttg agactgaaca
      121 cagattggaa cctgtctttg actctccaag gatgtcccgc cgtagcttgc gcctgatcac
      181 aacaacagct gcatacagca gtggggacgg ccagactgtt gacactcaca tcagcaccag
      241 cagggccacc ccggccaagg ggagagaaac caggacagtc aaacagagaa gtgcaagcaa
      301 gccagctttt agtatcaacc acctgtcagg gaagggcttg tcctcaagca caagccatga
      361 cagctcttgc agcctgcgga gtgccacggt gctgcggcat cctgtgctag acgagtctct
      421 gattcgtgag cagaccaaag tggaccactt ctggggtctc gatgatgatg gcgaccttaa
      481 aggtggaaat aaagctgcca ctcagggaaa tggtgaactg gcagcagagg tggcgagcag
      541 caacggatac acctgccgcg actgcaggat gctctcggct cggacagacg ctctcacagc
      601 ccactctgcc gtccacgggc ccacctcaag ggtttactcc agagatagga ctctcagacc
      661 ccgcggtgcg tccttttacc tggataggac tctgtggctg gccaagtaca cctcctcctc
      721 ctttgcgtca ttcatagttc aactttttca agtggtttta atgaagctca attttgaatc
      781 agaaacttac aaattgaaag gctatgaatc cagagcttat gaatcacaga gctatgagac
      841 aaagagccat gagtcagaag cccatctcgg tcactgtggg aggatgactg ccggagaact
      901 ttccagagtg gacggggagt ccctgtgtga tgactgtaag gggaagaagc accttgagac
      961 acacacaacc acccactcgc aactgtccca gccacacagg gcggcagggg ccatggggcg
     1021 cctctgcacc tacacaggtg acctcttggt tcgagcactg cgcaggacca gagctgctgg
     1081 gtggtctgtg gcagaggcca tgtggtcggt gctctggctg gctgtcactg ctccagggaa
     1141 ggcagcctct ggaaccttct ggtggctagg gagtggctgg taccaatttg ttactttgat
     1201 ttcctggctg aatgtgtttc ttcttaccag gtgccttcga aatatttgca aggtttttgt
     1261 cttgctgctc ccactcctac ttttattagg tgctggtttc tccttgtggg gccagggcaa
     1321 cttcttctca ctcctaccaa tgttgaattg gacggccatg cagccagcgc agagggtgga
     1381 caatcccaag gacatgcaca gacccggccc tctttccccg agtccacctc tcaaggttga
     1441 tcccatggct tcccagtggc ctcaggagag tgatatgggg cagaagatag cctctttgag
     1501 tgcacagtgc cacaaccatg atgagagact cgcagagctg acagtcctgc ttcagaaact
     1561 ccagatacgg gtagaccaag tggatgacgg cagggaaggg ctgtcactgt gggtcaagga
     1621 tatggttgga cagcacctgc aggagattgg ctccatagaa ccacctgatg ctaagactga
     1681 cttcctgact ttacaccatg accatgaagt gcgtctctcc agtttggaag atgttcttag
     1741 aaaactgact gaaaaatctg aggctatcca gaaggagctg gaggaaacca agctgagagc
     1801 aggcagcagg gatgaagagc agcccctcct tgaccgtgtg cagcacctag aactggagct
     1861 gaacctgctg aagtcacagc tgtcggactg gcagcatctg aggagcagct gtgagcaggc
     1921 tgatgcccgc atccaggaga ctgtgcagct catgttctct gaggaccagc cgggcggctc
     1981 cctcgagtgg ctgttacaga agctttcttc tcggttcgtg agcaaggatg agctgcaggt
     2041 gcttttgcat gaccttgagc tgaaactact gcagaatatc acacaccaca tcaccgtcac
     2101 aggccaggct ccgacatccg aggccattgt gtctgccatg agtcaggcag ggatttcagg
     2161 aatcacagaa gcgcaagcac atatcattgt gaacaatgct ctgaggctgt actcccaaga
     2221 caagactggg atggtggact ttgctctgga gtctggaggt ggcagcatcc taagcactcg
     2281 gtgctctgag acctatgaga ccaagacggc actgctgagc ctgttcgggg tcccactgtg
     2341 gtacttctca cagtcacctc gagtggtaat ccagcccgac atctacccgg ggaattgctg
     2401 ggcatttaag ggttcccagg ggtacctggt agttcgcttg tccatgaaga tctacccaac
     2461 cacgttcacc atggagcaca ttccaaagac gctgtcaccg actggtaaca tctccagtgc
     2521 ccccagagac tttgcagtct atggactgga aaccgagtat caggaagagg ggcagcctct
     2581 gggacggttc acctatgacc aggaagggga ctcactccag atgttccaca cactggaaag
     2641 acctgaccaa gggttccaga tagtagagct ccgggttctg tccaactggg gccaccctga
     2701 gtacacttgc ctctaccggt tccgagtcca cggagagccc atccagtaga gcactccagc
     2761 catgtacatg tctgtatata ccaagacgcc ataacactgg aactcattga gcaagagagc
     2821 acataagcat aggacctgtc agtcaccctt caataaatgt atgatagcca tgaggacatg
     2881 ttgagtcctc tgaggctgtg tgtgcgtgct cagagcccca aagcctggga agctttttga
     2941 attcatttga atgtatggtt ctcggacact cctttgattt ggggatttgc ttcaatgcat
     3001 aaagtcaagc agatgggctg gcaggtttcc aggctcttga catagaggct gagagctctg
     3061 ccttggccat cctctggatg tcaggaaggc aaaagttcca tttgctaaac ccacatgttt
     3121 ctttcaggga aaaggtctgt tcagtctgac cccttccaga tttcctggtg gggagaggct
     3181 gggtatgtcg tggattgtct gctttaagct ggggctccca tgattcccca ggggagtgga
     3241 ttgggctttc caaaagggca gtggggtaca cacaccatga atggtgctct tcgggtctca
     3301 gccaggccat tccattccag gcagatcaca gaatggacag gaaccttttg agatgtgacc
     3361 tctggtgtcc tccagctctg ttaggccctg ccgaggggga acaacactaa ggtggtgcta
     3421 gtggctatcc ctcttggtct ttaccactgc agcactttgt gctgcccttg ggtttgcctc
     3481 tgcaccatca tcagcccttc tcaacgactc aaatttggtt ataattaata tttaatattt
     3541 agacttttgt gagcagactt tataacatac atcatctgga cacttgaagt gtttagatgt
     3601 tttacctaaa caactgttaa gttttattgg ttagacagcc tggcagaata caagctcacc
     3661 ttctggggct cagagttctg ggatttcgtg catgttgcaa gcagtcctta agacagtggc
     3721 ccaaaataca tcccactcca tagggttaga gcctctgcct gtgtggccag gttgtgcgat
     3781 gtgcacacac tttgcatact ccgggttaca tgcagaagtc agaatttcct atattaaact
     3841 aaattgggga attgggggtg gagatatttt gaatatttat ttttaaaaat gcaagatagg
     3901 actttgtgca atgtattttt gtaaatgctt ttcaaaacac ttgtctttgg tagtgcttct
     3961 actgcctcca aattaagatg ctattgagat gtttaaataa aagagttaat ttttaaaa
//
