LOCUS       NM_001201369            1055 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus sulfotransferase family 5A, member 1 (Sult5a1),
            mRNA.
ACCESSION   NM_001201369
VERSION     NM_001201369.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Jan 18, 2018 this sequence version replaced NM_001201369.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.228365.1,
                                           SRR22582419.1177419.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                JAXUCZ010000019.1  68112612-68112656   c
            46-209              JAXUCZ010000019.1  68111858-68112021   c
            210-424             JAXUCZ010000019.1  68102544-68102758   c
            425-551             JAXUCZ010000019.1  68101668-68101794   c
            552-646             JAXUCZ010000019.1  68101415-68101509   c
            647-827             JAXUCZ010000019.1  68098743-68098923   c
            828-1055            JAXUCZ010000019.1  68097808-68098035   c
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..1055
                     /gene="Sult5a1"
                     /note="sulfotransferase family 5A, member 1"
                     /db_xref="GeneID:292077"
                     /db_xref="RGD:1310002"
     exon            1..45
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..943
                     /gene="Sult5a1"
                     /codon_start=1
                     /product="sulfotransferase family 5A, member 1"
                     /protein_id="NP_001188298.1"
                     /db_xref="GeneID:292077"
                     /db_xref="RGD:1310002"
                     /translation="MQRETLCLAPDSTSMNERMNTTEIFDGIRFPGFLHTLESLKAAC
                     SFQFQDTDVLLVTFPKSGTTWMQQVLSLIFCEGHLWPIHHLPNWARMPWMEQASFSSL
                     LSKLNTSWPRLLTSHLNAKGLSPALMKSKAKVVYMGRNPKDVLVSYYHFHQIAGFLPN
                     PSSFEDFADEFLEGTGFFGSWFDHVKGWLGLQKDLTLLFVTYEELHQEPRSTIRKLSE
                     FLGRTLGPKEEEIILEHSSFSFMSQSNMVNYSLLSKEIIDQSQGKFLRKGVVGNWREY
                     FTPELNEKFNAVYQSKMGDSGLSLPWTMD"
     exon            46..209
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     exon            210..424
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     exon            425..551
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     exon            552..646
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     exon            647..827
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
     exon            828..1055
                     /gene="Sult5a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgggagctc acaacgaggc gcactatgca gagagagact ttgtgccttg ctccggacag
       61 caccagcatg aatgagcgca tgaacaccac tgagatcttc gatggcatcc gcttcccagg
      121 gttcctgcac accctagagt ccctgaaggc agcgtgttct ttccagttcc aggacacgga
      181 cgtcctcttg gtaaccttcc ctaagtcagg taccacctgg atgcagcagg ttctgagtct
      241 tatcttctgt gagggccact tgtggcccat tcaccacctc cccaactggg cccgcatgcc
      301 ctggatggag caagcctcct ttagcagcct cctttccaag cttaacacct cctggcctcg
      361 tctactcacc tcccacctga acgccaaagg gctgtccccg gctctgatga agtccaaggc
      421 caaggtggtg tacatgggcc ggaaccccaa ggatgttctg gtttcctact accattttca
      481 ccaaattgcc ggcttcctgc ccaatcccag ctcctttgag gactttgcag atgagtttct
      541 cgagggcaca ggtttctttg gctcctggtt tgaccatgtg aaggggtggc tgggcctcca
      601 gaaggaccta actttgcttt tcgtcaccta cgaggagctg catcaggaac ctcgctcaac
      661 cattcggaag ttaagtgaat tcctggggcg caccctgggg ccaaaggaag aggagatcat
      721 actggaacac agcagcttct ccttcatgag tcagagtaac atggtcaact acagcctttt
      781 atccaaggag atcatagacc agagtcaggg caagttcctc cggaaaggtg ttgtggggaa
      841 ctggagggaa tactttactc ctgagctgaa tgaaaagttc aacgctgtct accagtccaa
      901 gatgggtgac tctggtcttt ccctcccctg gaccatggac tgacccttct gacccatcta
      961 gcctagtcac atgggtcact atgctcctgg tctagcctgt cctcttactg tgctctgtcc
     1021 ctggtctagc aataaaagcc cagatccacg ttgta
//
