LOCUS       NM_001013051            1209 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus SGT1 homolog, MIS12 kinetochore complex assembly
            cochaperone (Sugt1), mRNA.
ACCESSION   NM_001013051 XM_001073449 XM_214242
VERSION     NM_001013051.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Hong,T.J., Kim,S., Wi,A.R., Lee,P., Kang,M., Jeong,J.H. and
            Hahn,J.S.
  TITLE     Dynamic nucleotide-dependent interactions of cysteine- and
            histidine-rich domain (CHORD)-containing Hsp90 cochaperones Chp-1
            and melusin with cochaperones PP5 and Sgt1
  JOURNAL   J Biol Chem 288 (1), 215-222 (2013)
   PUBMED   23184943
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Bhavsar,A.P., Brown,N.F., Stoepel,J., Wiermer,M., Martin,D.D.,
            Hsu,K.J., Imami,K., Ross,C.J., Hayden,M.R., Foster,L.J., Li,X.,
            Hieter,P. and Finlay,B.B.
  TITLE     The Salmonella type III effector SspH2 specifically exploits the
            NLR co-chaperone activity of SGT1 to subvert immunity
  JOURNAL   PLoS Pathog 9 (7), e1003518 (2013)
   PUBMED   23935490
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158724.1.
            
            On or before Sep 7, 2008 this sequence version replaced
            XM_001073449.1, XM_214242.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158724.1, FQ220550.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15q12"
     gene            1..1209
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /note="SGT1 homolog, MIS12 kinetochore complex assembly
                     cochaperone"
                     /db_xref="GeneID:290408"
                     /db_xref="RGD:1307550"
     exon            1..90
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..1063
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /note="Suppressor of G2 allele of SKP1 homolog"
                     /codon_start=1
                     /product="protein SGT1 homolog"
                     /protein_id="NP_001013069.1"
                     /db_xref="GeneID:290408"
                     /db_xref="RGD:1307550"
                     /translation="MAAAAAGPASSQRFFQSFPDALIDGDPQAALEELTKALEQNPDD
                     AQYYCQRAYCHILLGKYCDGIADVKKSLELNPNNSTALLRKGICEYYEKDYASALETF
                     AEGQKLDGTDTNFDIWIKRCQEIQNGSEPEVSASQRTQSKIKYDWYQTESHVIITLMI
                     KNVQKNDVRVDFSEKELSAVVKIPSGEDCSLKLRLLHPIIPEQSTFKVLSTKIEIKMK
                     KPEAVRWEKLEGQGDVPAPKQFTADVKNMYPSSSHYTRNWDKLVGEIKEEEKNEKLEG
                     DAALNKLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWK
                     QY"
     exon            91..148
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            149..239
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            240..309
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            310..380
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            381..434
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            435..451
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            452..483
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            484..580
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            581..688
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            689..779
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            780..961
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
     exon            962..1180
                     /gene="Sugt1"
                     /gene_synonym="Aa1114"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtaacca aggtagaaaa cgctcaggca gacgctttcg tgactcctag ggatggcggc
       61 agctgcagca ggacctgcat cgtcccagcg gtttttccag agcttcccag atgctctgat
      121 cgacggggac ccccaggcgg cgttagagga gctgacgaag gctttggaac agaatccaga
      181 tgacgcacag tattactgtc agagagctta ttgtcacatt ctcctcggga aatactgtga
      241 tggtattgcc gatgtaaaga agtctcttga actcaatcca aataattcta ctgctcttct
      301 gaggaaagga atatgtgaat actatgaaaa agactatgct tctgctttag aaacatttgc
      361 agaaggacag aaattagatg gtacagatac aaattttgac atctggatta aaagatgcca
      421 agagattcag aatggatcag aacctgaagt gtctgcatct cagaggaccc agtcaaaaat
      481 caagtatgac tggtatcaaa cagaatctca tgtaatcatt acacttatga tcaagaatgt
      541 tcagaagaat gatgtacgtg tggatttttc agaaaaagag ttgtctgctg tggtgaaaat
      601 tccttctgga gaagactgca gtttgaaact gaggttgctt caccctataa taccagaaca
      661 gagtacattt aaagtactct caacaaagat tgaaattaaa atgaaaaagc cagaggcagt
      721 gagatgggaa aagctagagg gacaaggaga tgtgcccgcc ccgaaacagt tcacagcaga
      781 tgtaaagaac atgtatccct cctcgtctca ctacaccagg aactgggata aactggttgg
      841 tgaaatcaaa gaagaagaaa agaacgagaa gctggaaggt gacgcagctt taaacaagtt
      901 atttcagcag atctactcgg atggttccga tgaagtgaaa cgcgccatga acaagtcatt
      961 tatggagtct ggtggtacag tcttgagcac caactggtct gacgtaggta aaaggaaagt
     1021 tgaaatcaac cctcctgatg atatggaatg gaaacagtac taaataaatc agtttgctat
     1081 cactgtctta cgtttgttcg agtgcccatt gtgtgcttta tcacgttctt gagttttaag
     1141 cagtgtcttt tgaaagatta aacaaacctt tttgcctctc aaaaaaaaaa aaaaaaaaaa
     1201 aaaaaaaaa
//
