LOCUS       NM_199403               4966 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus SUN domain containing ossification factor (Suco),
            mRNA.
ACCESSION   NM_199403 XM_341139
VERSION     NM_199403.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4966)
  AUTHORS   Sohaskey,M.L., Jiang,Y., Zhao,J.J., Mohr,A., Roemer,F. and
            Harland,R.M.
  TITLE     Osteopotentia regulates osteoblast maturation, bone formation, and
            skeletal integrity in mice
  JOURNAL   J Cell Biol 189 (3), 511-525 (2010)
   PUBMED   20440000
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000244.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by NM_199403.4.
            
            On Feb 11, 2021 this sequence version replaced NM_199403.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ421447.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-511               JACYVU010000244.1  4978030-4978540     c
            512-623             JACYVU010000244.1  4965883-4965994     c
            624-734             JACYVU010000244.1  4963976-4964086     c
            735-889             JACYVU010000244.1  4961396-4961550     c
            890-1027            JACYVU010000244.1  4959608-4959745     c
            1028-1178           JACYVU010000244.1  4959073-4959223     c
            1179-1302           JACYVU010000244.1  4956155-4956278     c
            1303-1427           JACYVU010000244.1  4948447-4948571     c
            1428-1495           JACYVU010000244.1  4947912-4947979     c
            1496-1603           JACYVU010000244.1  4943840-4943947     c
            1604-1709           JACYVU010000244.1  4942594-4942699     c
            1710-1730           JACYVU010000244.1  4940822-4940842     c
            1731-1786           JACYVU010000244.1  4940568-4940623     c
            1787-1878           JACYVU010000244.1  4940010-4940101     c
            1879-1944           JACYVU010000244.1  4939236-4939301     c
            1945-2013           JACYVU010000244.1  4934048-4934116     c
            2014-2104           JACYVU010000244.1  4933048-4933138     c
            2105-3274           JACYVU010000244.1  4929417-4930586     c
            3275-3362           JACYVU010000244.1  4928818-4928905     c
            3363-3467           JACYVU010000244.1  4923378-4923482     c
            3468-3622           JACYVU010000244.1  4922336-4922490     c
            3623-3714           JACYVU010000244.1  4921818-4921909     c
            3715-3767           JACYVU010000244.1  4917104-4917156     c
            3768-4966           JACYVU010000244.1  4914217-4915415     c
FEATURES             Location/Qualifiers
     source          1..4966
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q22"
     gene            1..4966
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /note="SUN domain containing ossification factor"
                     /db_xref="GeneID:360863"
                     /db_xref="RGD:735185"
     exon            1..511
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     CDS             450..4211
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /note="protein C1orf9 homolog; protein osteopotentia
                     homolog; SUN-like protein 1; membrane protein CH1;
                     hypothetical protein Dd25"
                     /codon_start=1
                     /product="SUN domain-containing ossification factor
                     precursor"
                     /protein_id="NP_955435.3"
                     /db_xref="GeneID:360863"
                     /db_xref="RGD:735185"
                     /translation="MKKYRRALALVSCLSLCSLVWLPSWHVCCKESSSASTSYYSQDD
                     NCAVGSEDIQFQKKNEREEPSNAKVSEKSNSYLTISPEENKLKDDYTVDEQNMETAKL
                     SLPVVEALPTVDSHEESSSVVVGSENIENSSSSSTSETTPISKLDEIENSGTLSVAKP
                     GDTEQPEADCDAGEAADADASVEQPAFVSAQESLVGQHIENVSSSHGKEKVTKSEFES
                     KVSVSEQDGGDPKSALNASDTLKNESSDYTKPRETDPTSVTSPKDPEDIPTFDEWKKK
                     VMEVEKEKSQSLHPSSNGGPHATKKVQKNRNNYASVECGAKILAANPEAKSTSAILIE
                     NMDLYMLNPCSTKIWFVIELCEPIQVKQFDIANYELFSSTPKDFLVSISDRYPTNKWI
                     KLGTFHGRDERTVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFGT
                     SMVEEYEEIADSQYQSERQELFDEDYDYPLDYNTVEDKSSKNLLGSATNAILNMVNIA
                     ANILGAKTEDLTEGNKSISENATATTEPKMPESTGVSTPVPSPEYIIKEVHTHDTEPP
                     TSDPPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSSWFESETQILCSELTSICC
                     ISSFSEYLYKWCSVRIALYRQHSRTVSKGKDVSPQPSLLPPVDSVEVSVLQPPSGDVD
                     KEDMERELETVALDDLSSVHQAHVRNHTVDTVELEPSYPQTLSQSLPLDVTPEMDSLS
                     TVEGSESVKSEGGHKPSQVMPQESSVEFDDETEKKPESFSSVAKLSVIYETSKVNEVM
                     DGTVKEDIVSTHVVTKFPETKFPETVAPPPINTAAVPESEGMETKPSLADTLKHVVTP
                     VTDPSLPEVKEDEQSPDDALLRGLQRTATDFYAELQNSTDLGYGNGNLVHGSNQKESV
                     FMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQD
                     QRQTEAIHLLQAQLTNMTQIVSNLSATVAELKREVSDRQSYLVMSLVLCVVLGLMLCM
                     QRCRNTSQFDGDYTSKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLIRSKSLQFTGKE
                     DPNDLYIVEPLKFSPEKKKKRCKYKTEKIETIKPADPLHPIANGDIKGRKPFTNQRDF
                     SSMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQTQKTKTEKRALKRR
                     RSKVQDQGKLIKALIQTKSGSLPSLHDIIKGNKEITVGAFGVTAVSGHI"
     exon            512..623
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            624..734
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            735..889
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            890..1027
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1028..1178
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1179..1302
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1427
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..1495
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1496..1603
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1604..1709
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1710..1730
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1731..1786
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1787..1878
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1879..1944
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            1945..2013
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            2014..2104
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            2105..3274
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3275..3362
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3363..3467
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3468..3622
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3623..3714
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3715..3767
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
     exon            3768..4966
                     /gene="Suco"
                     /gene_synonym="Dd25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgggtgacgc gtctccttcc atccaactca gtagagtgtg aggtgccctg gcccggccgg
       61 cgattggctg ttgagaggcg agtacgcggc ggccgttggt ggctggcagc acggagcgag
      121 ggcccgggcg gacggggcgg ggatggggag gcagtggcgg cgaaggccgg aggaggcggg
      181 cgcgggcgag cgggcggaca cagcggcggc ggcggcagcg gcagtctctg gagcgtccct
      241 gtgaagtgtc cctgttctcg ctgccgtggg cctctcgggg aggccgtctg gaaagcgagt
      301 cgctgcggag ccgttcccct agtcccacaa cccttcggac tctcggtccc atcctcgcgt
      361 tcctgctcgg gctcctccat cttggcctcg gcagtggctg ctacggggag gatgtgccgc
      421 ctcctggcag ggggaagaag gaggagaaga tgaagaagta ccggcgggcc ttggccctgg
      481 tctcctgcct ctctctctgc tctctagtct ggcttccaag ttggcatgta tgctgtaaag
      541 agagttcttc agcttcaaca tcatactatt ctcaagatga taattgtgca gtaggaagtg
      601 aagacataca gttccagaaa aagaatgaaa gagaagaacc tagtaatgct aaagtatcag
      661 aaaaatcaaa ttcatattta actatatctc cagaagaaaa taaattaaaa gatgactaca
      721 ctgtggatga acaaaatatg gaaacagcga agttaagtct acctgtggtt gaagcactcc
      781 ctacagttga ttcgcatgaa gagtcttcca gtgtagttgt aggcagtgaa aacatcgaaa
      841 atagttccag ttcatctacc tcagaaacga ctccaatctc aaagcttgat gaaatagaaa
      901 actctggtac tttatctgta gccaagccag gtgacacaga gcagcctgaa gctgactgtg
      961 atgctgggga ggctgcggac gcagatgctt ccgtggagca gcctgctttc gtcagtgcac
     1021 aggagagcct tgttggccaa catatagaga acgtgtcgtc ttcacatggc aaagaaaaag
     1081 taacaaaatc agagtttgaa tcaaaagttt cagtgagtga acaagatggc ggtgatccaa
     1141 agtctgcatt gaatgcttca gatactttaa aaaatgagag ctctgattat acaaaaccac
     1201 gagaaactga ccctacatct gttacaagtc ccaaagaccc agaagatata cccacatttg
     1261 atgagtggaa gaagaaagtt atggaagtag agaaagaaaa aagtcagtcg ttgcacccat
     1321 cttctaatgg aggtccacat gccaccaaaa aggtccagaa aaatagaaat aattatgcct
     1381 ctgtagaatg cggtgccaaa attttggcag ctaatccgga agccaagagc acatctgcta
     1441 ttcttataga aaatatggat ctttatatgc tgaatccttg cagcactaaa atatggtttg
     1501 ttattgagct ttgtgagcca attcaagtga aacagtttga tattgcaaat tatgaattat
     1561 tttcttctac tcccaaagac tttctggttt ctatcagtga cagatatccc acaaataaat
     1621 ggattaagct gggtactttc catggtagag atgagcggac tgtccaaagt ttccccctgg
     1681 atgaacagat gtatgcaaaa tatgtgaaga tgttcatcaa gtacataaag gtggagctgt
     1741 tgtctcattt tggatcagag cacttctgtc ctttaagcct aataagggtt ttcggtacta
     1801 gtatggtgga agaatatgag gaaattgctg actcccagta tcaatcagag cgtcaggaac
     1861 tatttgatga ggactatgac tatcccctgg attataatac tgtggaggat aaatcttcaa
     1921 agaatcttct tggttctgct acaaatgcca ttctaaatat ggtgaatatt gctgctaata
     1981 ttctgggagc aaaaactgaa gacttgacag aaggaaataa aagtatatct gagaatgcca
     2041 ctgccacaac tgaacctaaa atgcctgaat caactggtgt ttcaactcct gttccatcgc
     2101 ctgaatatat aatcaaggaa gtccatacac atgatacaga accaccaacc tcagatcctc
     2161 caaaggagag tccgattgta cagctggttc aggaggaaga ggaggaagca agcccatcta
     2221 cagtgaccct tctgggcagc ggcgaacagg aggatgagtc ctcatcctgg tttgagtctg
     2281 agacacaaat actttgtagt gaactgactt caatttgttg tatttctagt ttttcggagt
     2341 acttatataa atggtgctca gttagaatcg ctctttatcg acaacacagc agaactgtga
     2401 gtaaaggaaa agatgtgtca cctcagccat cgttactccc tcctgtagac tcagtagaag
     2461 tttcagtact gcagcctccc agtggagatg tggataagga ggacatggaa agagaattgg
     2521 agactgtggc tctggatgat ttaagtagtg tgcaccaggc tcatgtgagg aatcacacag
     2581 tggatacagt tgaacttgaa ccaagctacc ctcaaactct ttctcagtcc cttcccttag
     2641 acgttactcc agaaatggat tcactgtcta cagtagaagg atctgagtct gttaaatctg
     2701 agggaggaca taaaccatcg caagtcatgc cccaagagag ttctgtcgag tttgatgacg
     2761 aaacagaaaa aaagcctgag agctttagtt ctgttgcgaa gctctctgtt atttatgaaa
     2821 caagtaaagt taacgaggta atggacggta ctgtgaaaga agacatagtc tccacacacg
     2881 tggtcaccaa gttccctgaa accaagttcc ctgaaacagt agcaccaccc cctataaaca
     2941 cagccgctgt gcctgagagt gaaggcatgg aaaccaaacc tagtttagct gatacactaa
     3001 agcacgtagt gacgcccgtt acagatcctt cattgcctga agtgaaagag gatgagcagt
     3061 ctccagacga tgccctttta agagggttac agaggacagc tacagatttc tatgctgaac
     3121 tacaaaattc tacagatctg ggatatggta atggaaacct tgtacatgga tcaaatcaga
     3181 aggagtcagt atttatgaga cttaataatc gtattaaagc cttagaagtt aacatgtctc
     3241 tcagtggtcg ttatctggag gagcttagtc aaaggtaccg aaaacaaatg gaagaaatgc
     3301 aaaaggcttt caataaaaca atagttaagc ttcagaatac ttcacggata gcagaagagc
     3361 aggatcagcg gcaaactgaa gccatccact tgctgcaggc acaactgacc aacatgacac
     3421 agattgtttc aaacttgtca gcaactgtag cagaattaaa acgggaggtt tcagatcgtc
     3481 agagttacct tgtcatgtct ttggttctat gtgtggtctt gggactgatg ctctgtatgc
     3541 aacgttgtcg aaatacttct caatttgatg gagattacac ttcaaaactt cctaaaagta
     3601 atcagtaccc aagccctaaa aggtgttttt cctcctatga tgacatgaat ttgaaaagaa
     3661 gaacctcatt tcccctcatc agatccaagt ctttgcagtt tactggcaaa gaagacccga
     3721 atgatttgta catcgtagaa cccctcaagt tctctccaga gaaaaagaag aaacgttgca
     3781 agtacaaaac tgaaaaaatt gagacaataa agcctgcaga tccattgcac cctatagcca
     3841 atggagatat aaaaggaaga aagcccttta cgaaccagag agatttttct agtatgggag
     3901 aagtttatca ctcttcttac aagggccctc cgtctgaggg aagctcagaa acttcatcac
     3961 agtcagaaga gtcctatttt tgtggcattt ccgcttgtac aagtctgtgc aatggacaga
     4021 cccaaaagac aaaaactgag aagagggctt taaaacgaag gcgatctaaa gtccaagacc
     4081 aaggaaagtt aataaaagct cttatacaga ctaagtcggg gtcattgccg agcctgcatg
     4141 acataatcaa aggaaacaag gagatcaccg tgggagcatt tggggttaca gcagtctcgg
     4201 gacatatcta aaaggagctg aacatttata ctgaggactt tttgttgttc tttgaagaac
     4261 agcctgtggt atttgaaggg ttcaggggga gggataaaat attggggaaa gtattcagaa
     4321 attatgtttt ttttattttg ccttttaaaa aagtagacag gattgcgtca atcttgctga
     4381 tgaactgcag ttttacgagg ctgatctctt cctatgagga tgatgataga cattttataa
     4441 agatgtgttt tcacagagaa ttactgggac aaaagtaatt tggaagccca gttccttggg
     4501 tggataggaa tgaaagccta aacctctccc ttcagcttgg ttcccgtttc ttgcaccttc
     4561 ccatatttat gtgccttttg tctatttata atgccactgg aagaggaggg agaacttttt
     4621 ctgtcagttg atttgttttg taactttatt aggtttttga agctgcaaca ctacaaagct
     4681 ttaaggtggt ccatgccaga agcccagcaa cgtgggtcat ttgcataaag atcctaaaga
     4741 cttccaactt agaatcgctc agtagtctca ctggaataaa cacttgctga agtttctaac
     4801 ggcctttcag ataaaaggtg atgagttcac cctgggtctt atttaattta gttggattgg
     4861 gttatgcttt tttccctgag tttttaactc agtaaaatgg taagatattt tcttgaaaat
     4921 gacaggtatt tgaaacaaat ttattataaa ttcaccttta aacaca
//
