LOCUS       XM_039108866            4683 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine/threonine/tyrosine kinase 1
            (Styk1), transcript variant X1, mRNA.
ACCESSION   XM_039108866
VERSION     XM_039108866.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4683
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4683
                     /gene="Styk1"
                     /note="serine/threonine/tyrosine kinase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:500340"
                     /db_xref="RGD:1564211"
     CDS             2145..3455
                     /gene="Styk1"
                     /codon_start=1
                     /product="tyrosine-protein kinase STYK1 isoform X1"
                     /protein_id="XP_038964794.1"
                     /db_xref="GeneID:500340"
                     /db_xref="RGD:1564211"
                     /translation="MKGNQEHRGMLGRGNCVRFLLFLFMAYTVVQEKQYEVIIVPALL
                     VGSFLILLAIILWLFIRGQRSQRQHPGPRGTTSVPASRGRSQEAVGHGEKVFVPLKET
                     SVESFLRAVTPSLAKLQVPREQLLEVLEQIHSGSCGTLYHAKMTTMEHPNPKSVVLKA
                     LEGSVGLQEVQDFIGRIQFYQYLGKHKNLVQLEGCCTERLPLYMMLEDVVPGDLLNFL
                     WTCRRDVMTMDGLLYDLTEKQIYHIGKQVLLALEFLQEKHLFHGDVAARNILIQSDLT
                     PKLCHLGLAYEVHTHGAISSARSSTIPLKWLAPERLLLRPASIRGDVWSFGILLYEMV
                     TLGAPPYPEVPPTSILQYLQRKKIMKRPSSCTHAMYNIMKYCWRWSEDSRPLPGELRL
                     RLEAASRTANDKAVLQVPELVVPDLYADVAGISTESLSDSYSVL"
ORIGIN      
        1 ggtgaaaggg ctccacctgt cagtgccttg ctagctttga aggtggaagg aaaagttatc
       61 gagttaatct gtctggtagc aagtcctcag ctctgagaaa gcccaaacag agttgaagct
      121 aatccagcaa tggtgcccca ctgtggataa tgacgatggt aggcaggagt ttggaccaaa
      181 ccaaggagtc tgggaaacgt cttagatgtt ggaaaaccat ggaaaccaat ctttcccaag
      241 attctccata tacattccat agaggaatat atacagtcat tttagtacaa ggggaccttt
      301 gtcgagcttc cagcaggcag agctgcggga cattatctgt gttagccaag caactgcatt
      361 tgtgtaattt gttaaatcgg caatagaaaa ctaacatatg acctgagcta ccagaattta
      421 aagctaacat aaatcacatg tggacgttta ctcatgacca acactctctg ggctacacca
      481 aaccagtgtt aacacaaggt cacgctaagg gcaacagccc acatttactt ccttgtttct
      541 tcagctgatc atacaatacc tgtttttttt ccccttacaa aatttttcct ttatgacccc
      601 aagaatcctc agtatggtaa gagactcata aactaccaac atatctactc ctatctgggt
      661 cccacagttt cattacctgg cttcagtttc ctcagtatcc tgggaaattg cttaaggtgc
      721 caggcaccac tgcagtgatt ccggatctga ccacagctcc atcagagcgt ctctgctgat
      781 ctcttattgc cggggaagcc gttcatggaa agcttctgac atgtcaaggc gttatcttct
      841 ctttgaggtc tccgtgcttc cagataaagt gagaagaatc gcttgactca cttcatgtta
      901 aatgtctttg aaacggtttc atagcagtgt gtctcgggat taaacacttt ttaggtttta
      961 aaaatgtcct tttgatgaaa caactctacc acttgaatta taattcccat ctaaggttca
     1021 attgtacatc aagagggctt agacaaagga gtgtatgata cctccccttc cccacacacc
     1081 tttccccagg agaaaggagg ctccagaaca tgtttctaaa gcaagctttg tactaaatat
     1141 ttgatgacgt acttctagga ctttattttg catttattac tcttaggttt ctccgtgttg
     1201 tgttggtggt tcttttgtct ttgtagtata ctgtgcctgg agttttgaca atttcgaatt
     1261 cccaggaaaa cggctgatac agggtctacc agacggtggc gctgttggcc tgcaccatgg
     1321 ctccgagctg ccctgaagag acttttgcac agttcattca cctggcaatc gcaatcgaaa
     1381 atgagcgcgt cgcttggcaa caagtccaag ttttacagtt tcggacgagg tttcctgctg
     1441 gctgctatgt ggtgagttcc ggaaacctca gcgcccgcag atttcccttt gtggggcgcc
     1501 cgccccaact tcatcctctg agggcagcca cgccccacta ggcgaagctg agactggaaa
     1561 gcctaaagcc tttccctgag gctggcacac cttgctgtgc ctcacctgcc tcttccagtc
     1621 ccctgaatgg ccagctccac ctgaaaccag agtgacctga ggaggaacaa gactagtcag
     1681 aagtaaagca gtaggctgcc ctgactccag agacatcctt ctctcaacac gggtacagta
     1741 ataacacacg aagtccttga aaatattgca ctgctgtggc tgtactccct gcagcctctg
     1801 tgggcccaac agaggagtct agccctgtgg ctatgggaga gaagggtcgc ctgagccggc
     1861 tgctgttgga atgcagtctc agtgacaagc tgtgtggtaa atgcagacac cccatccacc
     1921 tgtaatatag tgatgccaga acaatggaga ctgagttctg gatggttcta gaggaggagg
     1981 gctgtttcct ttctagtgga aaggaaaagg gactagaagg catcattttt acagagtgag
     2041 ggatacatgc caatcagaga taaacaaaaa ataatccttg agggtctaaa ccacaggttt
     2101 agtttctggt taaggttgac ctctgtggga ctccattaaa gggaatgaag ggaaaccagg
     2161 agcaccgagg catgctgggt aggggaaact gtgtcaggtt tcttctattc ctgtttatgg
     2221 cctacacagt tgttcaagag aagcagtatg aagtaatcat tgttccggct ctcctggttg
     2281 gcagcttcct catccttctt gcaatcatcc tgtggctttt tatcagagga cagagatccc
     2341 aaaggcagca ccctggaccc cgaggcacta cctctgtacc tgcatctagg ggccgaagcc
     2401 aggaagcagt gggacatgga gaaaaggtgt tcgtgcctct taaggagact tcagtggaga
     2461 gctttctacg agcagtcaca ccttccctgg ctaagctaca ggtgcccagg gaacaactcc
     2521 tggaggtcct ggaacagatc cacagtggta gttgtggaac cctctaccat gcaaaaatga
     2581 ccaccatgga gcaccctaat ccaaaaagtg ttgtcctcaa ggctctagaa ggctcagttg
     2641 gactccagga ggtccaggat tttatagggc gaatccaatt ctatcagtac ctggggaaac
     2701 ataagaacct ggtacagctg gaaggctgct gtacagaaag gctgccactc tacatgatgc
     2761 tggaggatgt ggtcccaggg gatctgctca actttctttg gacctgtcgc agggacgtga
     2821 tgaccatgga tggcctcctc tatgatctca cagaaaaaca aatatatcat attggaaagc
     2881 aggtcctttt ggccctggaa ttcctgcagg agaaacatct atttcatggg gatgtggccg
     2941 ccaggaacat cctgatccag agtgacctga ctcccaaact ttgtcatctg ggcttggcgt
     3001 atgaagttca tactcatggg gccatctcct ctgctcgctc cagcaccatc cctctcaagt
     3061 ggctcgctcc agaacggctt ctcctgagac ctgcaagcat caggggagat gtttggtcct
     3121 ttgggatcct gctttatgag atggtgactc taggggcacc tccataccct gaagtccctc
     3181 ccaccagcat cctacagtat ctgcagagaa agaaaatcat gaagagaccc agcagctgca
     3241 cacatgccat gtacaacatc atgaagtact gttggcgctg gagtgaggac agccgtccct
     3301 tacctggtga gctgcgcctg cgcctggaag ctgcctctag aaccgccaat gacaaggctg
     3361 tgttgcaagt gccagagtta gtggtgcctg acctgtatgc agatgtggct ggcatcagta
     3421 cggagagcct ttccgatagc tacagtgtcc tttgaaggtg gttccagaca agtgcatgga
     3481 atgagtttct tcaagaagag agggaaggaa ctttctatga gccacaaagg ggaaaaaaag
     3541 gagcatggat cctgcatctt tccctaaaca tttttctaga aatatgaaat gttgctggat
     3601 gagtctctgc ctctacacat tgtgtactct tgagctagta atcatcatca atcacagttt
     3661 gctttccagt cccaaggaca gaggtggcca gtgtcattcc aaaggaagtc ttaaaaagct
     3721 gcaatgattg ttaggaatag ggcaaaaggg ctggtcccac tcactctagg ctgatttacc
     3781 actgaaacta ttttttaaat ctaaactatt gcagagtaca aataaagcaa aggggtatga
     3841 atgaatagct cctaattttt aaatataaga attcatgaga aagaaaatgc aaggttcttt
     3901 ttgttgataa gtataaggta gatcagtata tccttcaggg aaaggttttg tctcctctat
     3961 gttgaaggaa tataaaagtt ctagtccctt catgaatagc tgaagaactg taagaaataa
     4021 tactgagttt ttccttgact gtagatagaa gagcgtcctt ttgttgaact ccgagacagt
     4081 aggaaccacc tatgattcta agtttaatta gaaacaagag gcatcacttg atgattaaga
     4141 acattgttca tcacatttgc ttgcccgttc ctgtaagact aaggagactc aacctaaaga
     4201 accaaagtta gaaccaggga tgatgaaatg tatgggtgtg tgtggtgtgt gtgtgtgtgt
     4261 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtaacaaata agcatggaag ccagcaagaa
     4321 aacttagtaa ctcaggtgtt cattaagagg tacagagaag aataatctca taggaataca
     4381 tggtagcttt tacattttaa tcatccattg aaatactgtg aaacaactca ttaaattagt
     4441 atttattgac caaaagtaga cttttcaggt gtatagctgc caaaatttat acaataagga
     4501 gggtaaagga aaataagtgg aagtaatttt actagaaagt ctaaagaacc tacattttcc
     4561 aaaaggagat tcattgtata caaaatgaga tgactatcta cctcagaggg ttggtatgag
     4621 ggccaatgag aatatgtatt tgtgtaatat gtggaatata atatgttctc aataaatact
     4681 agt
//
