LOCUS       XM_006236282            1522 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus stimulated by retinoic acid 8 (Stra8),
            mRNA.
ACCESSION   XM_006236282
VERSION     XM_006236282.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236282.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006236282.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1522
                     /gene="Stra8"
                     /note="stimulated by retinoic acid 8; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:500079"
                     /db_xref="RGD:1562852"
     CDS             239..1345
                     /gene="Stra8"
                     /codon_start=1
                     /product="stimulated by retinoic acid gene 8 protein
                     homolog"
                     /protein_id="XP_006236344.1"
                     /db_xref="GeneID:500079"
                     /db_xref="RGD:1562852"
                     /translation="MATPGEGNQPRDDGAPQPVPQLQQLEPRVARRRLSQARHRATLV
                     GLFNNLRKTVYSQSDLTASKWQVLNKAKSHIQELEGSLDNLLKLKGFFNLQDGNPNTL
                     EEVKEEYARMYSENESVFLNSFPQNSPPAWLPPEAVGPDAEEGGNDEEREVEEYQEEE
                     EEEEEEKKVDLSHSSPTLLPDLMEFERYLNFYKQTMDLLTMNSIISAQEVTLPIVSAA
                     ISHLWQTLSEEKKARLLQVWEQQHSTFSDLTEACLELAGAEGSMKDSGVDSQGASCSL
                     DSTPEEILFEDAFDVASFLDKSEAQRLSNISAVFASCNSENLEEKFQLYIQIIEFFKG
                     LGCVNTPLNQEPDPPVDDDVMLLKCLETFDDEDL"
ORIGIN      
        1 ccacgctccc attggcgcac caccacgtat ctccattggt catgggggta gtgacagggc
       61 tgtgattggt ccccagcctg gggtaccagg tcacatatct acctgaggca agagcctctc
      121 ttcttactct gcgacgggca gtcgtgagtg actgactcgt cagagcttcg agcaacttcc
      181 tgcgtgttcc acaagagtcg aaggtgcatg gttcaccgta gtggccttaa ggattataat
      241 ggccacccct ggagaaggca accaacccag agatgatggg gcaccccagc cagtgccaca
      301 gctgcagcag cttgagcccc gggtggcccg cagacgcctg tcccaggccc gccatcgagc
      361 caccctggta gggctcttca acaacctaag gaagacagtt tactcccagt ctgatctcac
      421 agcctcaaag tggcaggtac tgaataaggc gaagtctcat attcaggaac tggaaggaag
      481 cttggataat ttgctgaagc tcaaaggatt cttcaacctg caagacggaa atcccaacac
      541 cttagaggag gtcaaggaag aatatgccag aatgtactct gagaatgaaa gtgtgtttct
      601 aaacagtttt cctcagaaca gcccccctgc atggctgccc cctgaggctg ttgggccgga
      661 tgctgaagaa ggaggaaatg atgaagagag agaggtagag gagtaccagg aagaggagga
      721 agaggaggaa gaggagaaaa aagtcgatct gtcccactcc tctcccactc tgttgccgga
      781 cctcatggaa tttgaacggt acctcaactt ttacaagcag accatggacc tcctgaccat
      841 gaacagcatc atctccgcac aggaagtgac actccccatt gtctctgcgg ccatctccca
      901 cctgtggcag actctctctg aggagaaaaa ggccaggctc ctgcaggtgt gggagcaaca
      961 gcacagcacc ttctcggacc tcaccgaggc ctgtctagag ctggccggtg ctgagggcag
     1021 catgaaggac agcggggtgg acagccaagg agccagctgc tcactggact ccaccccgga
     1081 agagatcctc tttgaagatg cttttgatgt ggcgagcttc ctggacaaga gtgaggccca
     1141 gcgtctgtct aacatcagcg ctgtgtttgc cagctgcaac tcagaaaatc tagaggagaa
     1201 atttcagctc tacatacaga tcatcgagtt tttcaaaggc cttggctgtg tcaacactcc
     1261 attaaaccag gaaccagatc ctcctgtgga tgacgacgtg atgttgttga agtgcctgga
     1321 gaccttcgat gatgaagatc tgtaatgcgg aggggagctg aaaagaaaaa gattaaatgg
     1381 gggaggggcg ggtccaagtt tgaaatgcca atggctaggg ttataccccc ttgtctttca
     1441 agactcattg agaaaggctg tctccaaaag cctttttgat gttcttagtt tctgttacta
     1501 taaagtgtta agagcaatga ta
//
