LOCUS       NM_001025276            2455 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus STRA6-like (Stra6l), mRNA.
ACCESSION   NM_001025276 XM_216409
VERSION     NM_001025276.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097368.1.
            
            On Jul 13, 2005 this sequence version replaced XM_216409.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097368.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..2455
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /note="STRA6-like"
                     /db_xref="GeneID:298077"
                     /db_xref="RGD:1305807"
     exon            1..50
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..1896
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /note="Stimulated by retinoic acid gene 6 protein-like"
                     /codon_start=1
                     /product="STRA6-like"
                     /protein_id="NP_001020447.1"
                     /db_xref="GeneID:298077"
                     /db_xref="RGD:1305807"
                     /translation="MLAASARTRQLNVTCDNLVDGEVFLHYSLIPSLFIILVLSFFQR
                     REHRRQSDDTSYLLGNRFGIIMPLDFVGTFSNRWSYGVAFGATANKVMFLFSEGYQPL
                     KVPQWAQAFVLLIGGMEVGLSYFPFFACLSSEFQLVSSILGFGYSLTWFVVTVLQILQ
                     CPHGQFLGRFEALIFYWPSLLCLGFLLGRFLHMFFKALPVHLGLESQTEEKSLLEAHQ
                     EKHVKQLLSKPRPQEGEKSWFQTRVYEWDPCFQFPSRMIGTLVLAFICLYLFIVIEFC
                     VFLHVRDELDVFEDKLQSYLTHMNETGTLTPVILQVKELISVSKGVWVVTILPAALTC
                     VTYLFHILACYRKHMKRLWAGDKYFLPQKSHSPSSAASVVAIARYSGWQIAYILWGYL
                     IIHVVQSLCGVMLMYGLVLPIIHHQGLEMLRGLGLGVLTLSIAVGLIILQVWIAGTFF
                     LQPKLGPADKQKPLALNNRKAFHNFNYFLFFYNVLLGLGACLSRLLISCLLGTWLIAR
                     IDRTIMQSGYEGADMGFGAWIGMLFVDHYHTNPVLVSFCHILITSHKDGKLQKTAKHG
                     CPNQSAGPRFSARARTRWFLLQTLINNPRLAMLRKSKSGHSFREFTQILLTCSDC"
     exon            51..126
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            127..227
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            228..358
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            359..479
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            480..525
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            526..654
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            655..725
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            726..837
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            838..991
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            992..1067
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1149
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1198
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1316
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1317..1436
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1437..1600
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1601..1747
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
     exon            1748..2431
                     /gene="Stra6l"
                     /gene_synonym="RGD1305807"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tacctacagt ggtagtcctt cttcagcaag atgcttgctg ccagcgcaag gaccaggcag
       61 ctaaatgtca cctgtgacaa cttagtggac ggggaggtct tcctccatta ctctctcatt
      121 ccatcactct tcatcatttt ggtcttatct ttcttccaaa gacgagagca tcgtagacaa
      181 agtgatgaca cctcctacct cctggggaac cgctttggaa tcatcatgcc tctggacttc
      241 gtggggactt ttagtaaccg atggtcctat ggagttgcct ttggggccac agccaataag
      301 gtcatgttct tgttctcaga aggctaccag cccctgaagg ttccacagtg ggcccaagcc
      361 tttgtgcttc tcatcggagg catggaagtc ggtctctcct acttcccctt ctttgcctgc
      421 ctgtcctcag agttccagct ggtcagctcc atcttgggct tcgggtactc cctgacctgg
      481 tttgtggtta ctgttcttca gatcttacag tgtccccatg ggcagtttct agggaggttt
      541 gaggccctca ttttctactg gccctcactg ctgtgcctgg gtttcctgct gggtcgtttc
      601 ctgcacatgt tctttaaggc tctgcctgtt cacctgggcc tggagtcgca gacagaagaa
      661 aagtcgctgc tggaggctca ccaggaaaag cacgtgaagc agctcttgag caagccccgc
      721 ccacaagaag gagaaaagtc ttggtttcaa accagggtgt atgagtggga cccgtgcttc
      781 cagttcccca gcaggatgat tggcaccctc gtgctggcgt tcatctgcct ctacctcttc
      841 atcgtcattg agttttgtgt atttctacac gtgagagacg agctggacgt gtttgaagac
      901 aagctgcaga gctacctcac ccacatgaac gagacaggga ccctgacccc agtcatccta
      961 caggtgaaag aactgatcag cgtcagtaaa ggagtgtggg tggtgaccat tttgcctgct
     1021 gccctcacgt gtgtcaccta tctcttccac attttggcct gttacagaaa gcatatgaag
     1081 aggctatggg ctggagacaa atacttcctt cctcagaagt cccacagtcc ctcttcagca
     1141 gcgagtgtgg tggccattgc aaggtactct ggctggcaaa tagcctacat cctctggggc
     1201 tacctcatca tccatgtggt acagagcctc tgtggtgtga tgctcatgta tggcctggtg
     1261 ctgcccatca tccaccacca aggcctggag atgctgcgag gacttggcct tggggtcctc
     1321 accctatcca tagctgtggg ccttataatt ctacaagtgt ggattgctgg cacattcttc
     1381 ctgcagccca agctgggccc agctgacaag cagaagcccc tggctctcaa taacaggaaa
     1441 gccttccaca acttcaacta cttcctgttt ttctacaacg tgctgctggg cctgggtgcc
     1501 tgcctctcca ggctgctcat cagctgcctc ctgggcacat ggctgattgc acgcatcgac
     1561 aggaccatca tgcaaagcgg ctatgagggt gcagacatgg gcttcggtgc atggatcggg
     1621 atgctctttg tggaccatta ccacaccaac cctgtgctgg tcagcttttg ccacattctg
     1681 atcacaagcc acaaggatgg aaagctgcag aagactgcga aacatgggtg cccaaaccag
     1741 tccgcaggtc cccgattctc ggccagggcc agaacgaggt ggttcctgct gcagacgctg
     1801 atcaacaacc ccaggctcgc catgcttaga aaatcaaaat caggccatag tttcagagag
     1861 ttcacacaga ttctgctgac ctgctcagac tgctgattgg gccaccagct tcagctccga
     1921 ggctaggcca tcatcccctt tcacaaggga ctcaggctaa ctatcagcca ttccctacca
     1981 tgggacagga tgacatgggc actgttcatg cacatgatag acagcactga tcacttgtgc
     2041 gatggccatg tagaccaatg gtttaagcct agaatgctct cagtcccttg gccaaaaaga
     2101 aaaacaatat aaaaagcaat gtctgttgag tgaatttcgc ctcagtgacc tccactattt
     2161 gtgggaaggc cgccatgggg gtcacctgct aagaagcatg aaagagaggc tggataaatg
     2221 agacggctcg ggtcgagtgc atttgcaggg gactcgggtt tggttcccag cgtccacgtt
     2281 gggcagcaca caagtgtccg taactctagc tctatgggat ctgacccatt tctggcctct
     2341 tcaggcacct gcacaaatgt ggcagacaca tatacgctta agtaaaaata attaaaaaaa
     2401 aaacgaatct ttaaaacatt ttttaaaaga aaaaaaaaaa aaaaaaaaaa aaaaa
//
