LOCUS       NM_001163562             849 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus sperm-tail PG-rich repeat containing 4 (Stpg4),
            mRNA.
ACCESSION   NM_001163562 XM_001058327
VERSION     NM_001163562.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Hatanaka,Y., Shimizu,N., Nishikawa,S., Tokoro,M., Shin,S.W.,
            Nishihara,T., Amano,T., Anzai,M., Kato,H., Mitani,T., Hosoi,Y.,
            Kishigami,S. and Matsumoto,K.
  TITLE     GSE is a maternal factor involved in active DNA demethylation in
            zygotes
  JOURNAL   PLoS One 8 (4), e60205 (2013)
   PUBMED   23560077
REFERENCE   2  (bases 1 to 849)
  AUTHORS   Mizuno,S., Sono,Y., Matsuoka,T., Matsumoto,K., Saeki,K., Hosoi,Y.,
            Fukuda,A., Morimoto,Y. and Iritani,A.
  TITLE     Expression and subcellular localization of GSE protein in germ
            cells and preimplantation embryos
  JOURNAL   J Reprod Dev 52 (3), 429-438 (2006)
   PUBMED   16571911
REFERENCE   3  (bases 1 to 849)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On Jul 25, 2009 this sequence version replaced XM_001058327.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q12"
     gene            1..849
                     /gene="Stpg4"
                     /note="sperm-tail PG-rich repeat containing 4"
                     /db_xref="GeneID:681766"
                     /db_xref="RGD:1591638"
     exon            1..164
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..824
                     /gene="Stpg4"
                     /note="uncharacterized protein C2orf61 homolog"
                     /codon_start=1
                     /product="protein STPG4"
                     /protein_id="NP_001157034.1"
                     /db_xref="GeneID:681766"
                     /db_xref="RGD:1591638"
                     /translation="MAEPTVVLTSTTVPREDLGRRESLLTTSKKVKKITGIEREGWWR
                     LTVTNTPIPGTYHLRTFIEEALLNPVSITYNFKNEGRKRIPLVLRNDPVPTDLPQYSP
                     PDFLELLKKQTASYSFKDKPRADPSTLVEKDKSLHLCPGQYDTLPAPVPKNSARSFVF
                     RSSVQRFPPNYFTPHEGPGPGDYNLKLPRSGSITSCFRSRVPRFLPVGSKTPGPGAYT
                     CTRQFPRQSSTIAKMGREHSLFFNNTIGF"
     exon            165..224
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     exon            225..482
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     exon            483..547
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     exon            548..602
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     exon            603..707
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
     exon            708..849
                     /gene="Stpg4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctcggaat cggcgggtgg ccgcggttcc tagcaaccgc ctggcctgcc agcaccggct
       61 tgcagaaagt ccagggcgcc atggctgagc caaccgttgt cttaacctcc accacagtac
      121 caagagaaga cctgggacgt agggagtcgc tcctaacgac ttcgaaaaaa gtcaagaaga
      181 ttacaggcat tgagagagaa ggatggtgga ggctcacagt gacgaatact ccaatacccg
      241 gtacttacca tttaaggact tttattgaag aagccctact aaatccagtg agtataacct
      301 acaattttaa aaatgaaggc aggaaaagga tcccgcttgt gctgagaaac gatccggtcc
      361 ccactgacct cccgcaatat agtccccctg acttcctgga gttgttgaag aagcaaacgg
      421 cctcgtactc cttcaaagac aagccccgcg cagaccccag cacgctagtt gaaaaagata
      481 agtcactcca tctttgcccg ggacagtacg acactcttcc tgcaccggtt cccaagaact
      541 cagccaggag cttcgtattt cgttcttcag ttcaaagatt cccaccaaac tatttcactc
      601 ctcacgaggg ccctggacca ggggactaca acttgaaact gccccgatca ggatctatca
      661 cttcgtgttt tagatctagg gttccccggt tcctgcctgt cggttcaaaa acgccaggcc
      721 caggagcgta tacatgtaca agacaattcc ccagacagtc ttcaaccatc gccaaaatgg
      781 gtagagaaca tagccttttc ttcaataaca caattggctt ttgaaataaa actatattgg
      841 tgccaagtt
//
