LOCUS       XM_006253772            2253 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus stathmin domain containing 1 (Stmnd1),
            transcript variant X1, mRNA.
ACCESSION   XM_006253772
VERSION     XM_006253772.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253772.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006253772.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2253
                     /gene="Stmnd1"
                     /note="stathmin domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102554838"
                     /db_xref="RGD:1564013"
     CDS             164..1000
                     /gene="Stmnd1"
                     /codon_start=1
                     /product="stathmin domain-containing protein 1 isoform X1"
                     /protein_id="XP_006253834.1"
                     /db_xref="GeneID:102554838"
                     /db_xref="RGD:1564013"
                     /translation="MGCGPSQQTEDQSQSRMPSPRKGWEEGSKADVRVTSSKENYSPQ
                     TEVAWPKDTIDNAKSLDQQAQMGSLPGTIPENSPTPSNTNRRINSDPVANGLTNKPQL
                     LESWERPKSSDILEELIVQGIIQSRSKVFRNGESYDVMVGTTEKPLRKPPARLKKLKV
                     KKEVKDFTIQDLEEKMQAAEERRKTKKEEIRKRLRSDRLLPTANPSDETELGRVEVPF
                     TKGLPAVSAPALEKSYTQEGEPLKRKKSESDVAQMNRNYSCTGLELVESDMYYNQEDN
                     IF"
ORIGIN      
        1 tgtgtctgtg acgcccgttt attatggcaa cagtttccag caacttccca gatgctgaac
       61 ctggaggtat gggaggaggg agtgctgggc cctgaccgag gaacaaggac tccaggacca
      121 gataggagct cccccggcac agcctagaga ggaggagcga gcaatgggct gtggaccttc
      181 ccagcaaaca gaggaccaga gccagagccg catgccctct cccaggaagg gctgggaaga
      241 gggatccaag gctgatgtca gagtaacttc ttccaaagag aattacagtc cccaaactga
      301 agttgcatgg cccaaggaca ccatagacaa cgccaagagt ctggaccaac aagcacagat
      361 gggaagtttg cctgggacta ttccagaaaa ttctccaact cctagtaaca caaacaggag
      421 aataaattca gacccagtgg ccaatggatt gaccaacaaa ccccaactcc tggagagttg
      481 ggagagacca aagtcatcag acattctgga agagctgatt gtccaaggaa tcatacagag
      541 ccggagcaaa gtatttagaa atggagagtc atatgacgtc atggtgggca ctacagagaa
      601 gccactgaga aagccaccag ccagactgaa aaagcttaag gtgaaaaagg aggtgaagga
      661 tttcacaatc caagacctag aagaaaagat gcaggcggca gaggagcgcc gaaagacaaa
      721 aaaggaagaa ataagaaaaa ggctacggag tgaccggctt ctgcctaccg ctaacccttc
      781 ggatgaaact gagctgggca gagtggaggt tccttttaca aaaggccttc cagctgtgag
      841 tgcccctgct ctggagaagt cctatacaca ggaaggagag ccactaaaga ggaagaagag
      901 cgaaagtgat gtggcccaga tgaaccggaa ctactcctgc acaggtttgg agctcgtgga
      961 gtcagacatg tattataacc aagaggacaa catattctaa tacgccattt taaaaatcat
     1021 ttcacaaagt ggtccatact ttccagtagg tcttagtgtg tctcactgtc tttaaaaaaa
     1081 aaatgactat gtctctactt gtaaagactt ctgccctggg tttagggatg gttctgtgag
     1141 catcagggga tggattttag ttgagtgaat taaaggctgt acttttaaaa aaaggggggg
     1201 ggggttgttt cagaatggct tccagcacta gagatcttag attcggaagt ccctgccagc
     1261 ttacctgaat tatgtttgtg ccaaaagaaa ttctcccttt tcgtttctga ccttggctat
     1321 gtgggatgag tccttcacca cgaaatgcat agatgtgtat tccatgttgt tttaattttc
     1381 tgcgtgtttc ttctgtttta attctctgct gtttgagaat aaagaagtgc cttgaggttg
     1441 gctcaattat ctacatcatt taaggattct gaatccagtg gtcaaggtaa tgtcaagtgg
     1501 gaggggtggg gatggcgcca tccctcaggt gagctgccct ggctcaccct ttccatggga
     1561 aacaaaggaa aacaaagtaa cagaattgtc tacagtacta ctcattattc atgctgaagg
     1621 agaaaaactc tgattagggg aagagtagga ggagctccag gggctgaaga tccaccccat
     1681 gcttctgctt ttccctcagg ctctctgagc tcaggaacct cctgcattca tcttactaga
     1741 attatgtctt gggtctcccc caccccttaa tcacctacat ccagtcaaga acccgatctt
     1801 ccaagtttac attctgaaga tctggtccat ccattttttc acatgtttct cctggtccct
     1861 accttatcca tcaccatcca acagttttcc cagcctctac acaaccaagg tctgttttaa
     1921 gacctctgtt ccgccatttc tggcccctac acctaaactg ttaaaataaa aatacatatt
     1981 gcctgtgtct gtggctcgtt tggatagtga agtccattcc taactggaag atcactggtt
     2041 tgcttctgct cttgggctgg cgttgtagcc tcgtttgaag agtgcttgtc tggtatacac
     2101 caatccagga ttccatccgc agcattacac aaaccaggca tggtaataca tccccataac
     2161 tgagcatctg gacagtggaa acaagaggat cagaagttca cggtcgactt ctgctacata
     2221 ataaattcaa ggttagcctg ggctacatga gac
//
