LOCUS       NM_001083336            2407 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus serine/threonine kinase 38 like (Stk38l), mRNA.
ACCESSION   NM_001083336 XM_001075179
VERSION     NM_001083336.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ultanir SK, Hertz NT, Li G, Ge WP, Burlingame AL, Pleasure SJ,
            Shokat KM, Jan LY and Jan YN.
  TITLE     Chemical genetic identification of NDR1/2 kinase substrates AAK1
            and Rabin8 Uncovers their roles in dendrite arborization and spine
            development
  JOURNAL   Neuron 73 (6), 1127-1142 (2012)
   PUBMED   22445341
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Zhou Y, Adolfs Y, Pijnappel WW, Fuller SJ, Van der Schors RC, Li
            KW, Sugden PH, Smit AB, Hergovich A and Pasterkamp RJ.
  TITLE     MICAL-1 is a negative regulator of MST-NDR kinase signaling and
            apoptosis
  JOURNAL   Mol Cell Biol 31 (17), 3603-3615 (2011)
   PUBMED   21730291
REFERENCE   3  (bases 1 to 2407)
  AUTHORS   Fuller SJ, Pikkarainen S, Tham el L, Cullingford TE, Molkentin JD,
            Cornils H, Hergovich A, Hemmings BA, Clerk A and Sugden PH.
  TITLE     Nuclear Dbf2-related protein kinases (NDRs) in isolated cardiac
            myocytes and the myocardium: activation by cellular stresses and by
            phosphoprotein serine-/threonine-phosphatase inhibitors
  JOURNAL   Cell Signal 20 (8), 1564-1577 (2008)
   PUBMED   18555663
REFERENCE   4  (bases 1 to 2407)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   5  (bases 1 to 2407)
  AUTHORS   Stork O, Zhdanov A, Kudersky A, Yoshikawa T, Obata K and Pape HC.
  TITLE     Neuronal functions of the novel serine/threonine kinase Ndr2
  JOURNAL   J Biol Chem 279 (44), 45773-45781 (2004)
   PUBMED   15308672
REFERENCE   6  (bases 1 to 2407)
  AUTHORS   Devroe E, Erdjument-Bromage H, Tempst P and Silver PA.
  TITLE     Human Mob proteins regulate the NDR1 and NDR2 serine-threonine
            kinases
  JOURNAL   J Biol Chem 279 (23), 24444-24451 (2004)
   PUBMED   15067004
REFERENCE   7  (bases 1 to 2407)
  AUTHORS   Stegert MR, Tamaskovic R, Bichsel SJ, Hergovich A and Hemmings BA.
  TITLE     Regulation of NDR2 protein kinase by multi-site phosphorylation and
            the S100B calcium-binding protein
  JOURNAL   J Biol Chem 279 (22), 23806-23812 (2004)
   PUBMED   15037617
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000151.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by
            NM_001083336.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001083336.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EF444939.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132291, SAMD00132294
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                JACYVU010000151.1  15951344-15951380
            38-134              JACYVU010000151.1  15972215-15972311
            135-283             JACYVU010000151.1  15990399-15990547
            284-335             JACYVU010000151.1  15991950-15992001
            336-458             JACYVU010000151.1  15998469-15998591
            459-542             JACYVU010000151.1  15999098-15999181
            543-666             JACYVU010000151.1  15999765-15999888
            667-821             JACYVU010000151.1  16000623-16000777
            822-924             JACYVU010000151.1  16001131-16001233
            925-986             JACYVU010000151.1  16001410-16001471
            987-1104            JACYVU010000151.1  16002972-16003089
            1105-1228           JACYVU010000151.1  16003461-16003584
            1229-1324           JACYVU010000151.1  16004662-16004757
            1325-1416           JACYVU010000151.1  16006850-16006941
            1417-2407           JACYVU010000151.1  16007051-16008041
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q44"
     gene            1..2407
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /note="serine/threonine kinase 38 like"
                     /db_xref="GeneID:691337"
                     /db_xref="RGD:1564793"
     exon            1..37
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            38..134
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            135..283
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     CDS             150..1544
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /EC_number="2.7.11.1"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 38-like"
                     /protein_id="NP_001076805.1"
                     /db_xref="GeneID:691337"
                     /db_xref="RGD:1564793"
                     /translation="MAMTAGATTTFPMSSHTRERVTVAKLTLENFYSNLILQHEERET
                     RQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIGRGAFG
                     EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK
                     RNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYISETVLAIDAIHQLGFIHRDIKPDN
                     LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNR
                     RQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRK
                     VMSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIR
                     ERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLNYTYKRFEGLT
                     QRGSIPTYMKAGKL"
     exon            284..335
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            336..458
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            459..542
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            543..666
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            667..821
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            822..924
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            925..986
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            987..1104
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            1105..1228
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            1229..1324
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1416
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..2407
                     /gene="Stk38l"
                     /gene_synonym="RGD1564793"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggaggagg ctgagcggga gcgggcgaca ccggcaggac acacttactg aggtctcaga
       61 gctctctcca ctgatgctgc tgtggctcag gaacgcagcc tgctggactg tcctcactgt
      121 ctcctaactg ccaatcagtt ccagttacta tggcaatgac ggcaggggca acaaccacct
      181 ttcctatgag cagccatacc cgggaacgag tcactgtggc caagctcacg ctggagaatt
      241 tttacagcaa cctaattttg cagcatgaag agagagaaac caggcagaag aagttagaag
      301 tggctatgga agaagaagga ctggcagacg aggagaaaaa gttacgccgg tcacagcatg
      361 ctcggaaaga aacagagttc ctacgcctga agaggaccag acttggcctg gatgacttcg
      421 agtctctgaa ggtcatagga agaggagctt tcggagaggt gcggctggtc cagaagaagg
      481 acacagggca catctatgcc atgaagatcc tgaggaaagc tgacatgctt gagaaggagc
      541 aggtggctca tatccgagcg gagagagaca ttctggtgga ggcagacgga gcctgggtag
      601 tgaagatgtt ctacagcttt caggacaagc ggaacctcta tctcatcatg gagttccttc
      661 ctggaggtga catgatgaca ttgctgatga agaaggacac cttaacagaa gaggagacgc
      721 agttctacat ctcagagact gtcttggcga ttgacgcaat ccaccagcta ggcttcatcc
      781 accgggacat caagccagac aaccttttac tggatgccaa gggacatgta aaactatctg
      841 attttggttt gtgcacgggg ttaaagaagg ctcacaggac tgaattctac agaaacctca
      901 cacacaaccc accaagcgac ttctcatttc agaacatgaa ctcgaagcgg aaagcagaga
      961 cgtggaagaa gaacaggagg cagctggctt attccacagt tggaacacca gactacattg
     1021 ctccagaggt cttcatgcag acagggtaca acaagctgtg tgactggtgg tccttgggag
     1081 tgattatgta tgagatgcta ataggctttc cacctttctg ctccgagaca cctcaagaaa
     1141 cgtacaggaa agttatgagc tggaaggaga cgctggcatt tcctccagag gtgcccgtct
     1201 ctgagaaagc caaggacttg attctcagat tttgtactga ttctgaaaac agaattggga
     1261 atggtggtgt ggaagagatc aaaggtcatc cgttctttga gggtgtggac tgggggcaca
     1321 taagggaaag accagcagct atccctatag aaatccggag catagatgac acctcaaact
     1381 tcgatgactt ccctgagtct gatatcttac agccagtgcc gaataccaca gagcctgact
     1441 acaaatccaa agactgggtc tttctcaatt acacctacaa aaggtttgaa gggctgaccc
     1501 agcgaggctc catccccacg tacatgaaag ctgggaagtt atgatgatta cagctgccca
     1561 tagccaggag agctcagaga gctgcatccc caggccggct ctgtgtcagc accaggagct
     1621 ccaggacggt gccgctctcc agccccagct ggggggaaca tctacagctt gggagtctga
     1681 gactgctacg gctatgggaa gtgatctgcg tctctctctc tctctctctc tctctctctc
     1741 tctctctctc tctctctctc tctctctgta gtaactttat tgtactgagg tactgaaaca
     1801 gaggaacgga tattccctcc tgactgctgt ctgtgtgcac ggtgagagtc catatgctgc
     1861 acttccttcc aattgcagca ctgatccagc cagaaccaca tcgcactgat ggcaccatgc
     1921 agcctggagg cactccttcc tggtgtccct gcttcactgc agagctcgtg ggtctagaat
     1981 cagtgaaaag ccatcttctg tagctgctgt cagaacattt gccctgttgg tttggacatt
     2041 gtaggctcta cgtgaagaca gtttctgtac cggctgcaag gaacttaagg acactgactc
     2101 cgacattaga attctctgtc aagctctcat gcagaccccg tggtagcgaa gatgagcttc
     2161 tgtcagcatg aggacgtttc tcacctccac cgcaacatcc tccaaggccg atggtgctga
     2221 gagatattga cgatatgcac acagggagat gtgcccggtg actgtcagct acttctctgt
     2281 gacacaagga ctccattttt aacaggagga catagcattg tttccttgga ggatggtgag
     2341 cgagtttcag aagtgaccat gaaagctgcc tgtagaacct acctagtgcg tttttattaa
     2401 actattt
//
