LOCUS       XM_039094526            2620 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine/threonine kinase 33 (Stk33),
            transcript variant X4, mRNA.
ACCESSION   XM_039094526
VERSION     XM_039094526.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094526.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2620
                     /gene="Stk33"
                     /note="serine/threonine kinase 33; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     5 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:690861"
                     /db_xref="RGD:1590972"
     CDS             486..2012
                     /gene="Stk33"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 33"
                     /protein_id="XP_038950454.1"
                     /db_xref="GeneID:690861"
                     /db_xref="RGD:1590972"
                     /translation="MADHHLDEVPTACPHCASSQAGLLCVCPAGNSPVMVVEMSQTSS
                     IGSIDIFTSQERKKERNASRESSLKDLSTRTSNVERKSSQSQRNRSNVTGGKVPHIRM
                     DNGASIEEFYTFGRILGQGSFGMVIEATDKETGAKWAIKKVNKEKAGSSAVKLLEREV
                     NILKTVKHQHIIHLEQVFESPQKMYLVMELCEDGELKEVLDQRGHFSESETRLIIQSL
                     ASAIAYLHSKDIVHRDLKLENIMVKSSFIDDNNEMNLNIKVSDFGLAVQKHGSRSESM
                     MQTTCGTPIYMAPEVINAHDYSQQCDIWSIGVIMYILLCGEPPFLANSEEKLFELIRK
                     GELQFQDPVWDSVSDSAKSALKQLMKVDPAHRITAKELLDNQWLTGNTLSSARPTNVL
                     EMMKEWKNNPESDDDTKADKETEQHTEEKLKHNKIEEKAPNVNHSPSAKSVNQPTDEA
                     KKPDADSVDMSPSDSTSYKLISAEIKAEPEKSSGSVSHVAVAKTTLKSSALFRGKKRL
                     "
ORIGIN      
        1 tgctatggca accgcaggca aaccggcctc agggcctcca gctgccggtc cgcctggcgt
       61 ccagctcgga ggacggacct ggggatgacc acggaccctt taggagtctc tggggggcct
      121 aagcagctgg gacctccatt tcccctggtc tggagtttgg ggtggtccct tgctgcttgg
      181 gtccatctac acctcctcat ttccatctca tgttcgctac aggaaacatt tttgaaagtt
      241 taatgtgaac tcaccaaggg aacattgcga attcatctgt ggaagaaacg gggtgctgtg
      301 ggcactgtgt gagaaccatc ggtacactcc catgcgtgaa gtgcggtacc tcattaaccc
      361 aaggacctca ccaacaggaa gctgtattct ttaccagcaa ctcaccacat cctttttgat
      421 ctggttttct ttttcaaaaa gtggacacat ttcttttgag ctatttttgt tgcaaagtta
      481 agcaaatggc tgatcaccac ttggatgagg ttcctacagc atgcccacac tgtgcgtctt
      541 ctcaggctgg tctactttgt gtgtgtccag caggaaattc tccagtgatg gtggtggaaa
      601 tgtcacagac atcgagtatt ggtagtatag acatttttac ttcacaagag agaaaaaaag
      661 aaagaaatgc cagcagagaa tcttctctaa aagatttgtc cacaagaact tcaaatgtgg
      721 agagaaaatc ttctcagtca cagcggaatc ggagcaatgt cacaggagga aaagtccctc
      781 acatacgaat ggacaatgga gcgagcattg aggaattcta tacctttgga agaatattgg
      841 gacaggggag ctttggaatg gtcattgaag ctacagacaa ggaaacagga gctaagtggg
      901 caattaaaaa agtgaataaa gaaaaggctg gaagttctgc agtgaagtta cttgagcggg
      961 aggtgaacat cctaaagact gtcaaacatc aacacatcat ccacctggaa caagtgtttg
     1021 agtcgcctca gaaaatgtac cttgtgatgg agctttgtga ggatggagaa ctcaaagaag
     1081 ttctggatca aagaggacac ttctcagaga gtgagacaag gctgataatt caaagtctcg
     1141 catcagccat cgcatatctt catagcaagg atatagtgca cagagatcta aagctggaaa
     1201 acataatggt taaaagcagc tttatagatg acaacaatga aatgaactta aacataaagg
     1261 tgtctgattt tggcttggcc gtgcagaagc atggctctag gagtgaaagc atgatgcaga
     1321 ctacatgtgg cactcctatc tatatggcac cagaggtcat caatgcccat gactacagcc
     1381 agcagtgtga catttggagc ataggtgtca taatgtacat tttactgtgt ggagagccac
     1441 cctttttggc aaattcagaa gaaaagctct ttgaattaat aaggaaggga gaactacaat
     1501 ttcaagatcc agtctgggat tctgtaagtg attctgcaaa aagtgctttg aaacagctca
     1561 tgaaagtaga ccccgctcac agaatcacag ctaaggaact gctagataac cagtggttga
     1621 caggcaatac tctttcttca gcgagaccaa ctaatgtatt agaaatgatg aaagaatgga
     1681 aaaataaccc agaaagtgat gatgacacca aggcagacaa ggagactgag cagcacactg
     1741 aggaaaagtt gaagcataac aaaatagagg aaaaggcccc gaatgtcaac cacagtccat
     1801 ctgcaaagtc agtaaatcag cccactgatg aagccaagaa gcctgacgca gatagcgttg
     1861 acatgagccc ttcagactca acatcctaca aactcatttc tgctgaaatc aaagcagagc
     1921 cagagaaaag ctccgggtct gtaagccatg tagcagtggc taaaaccact ctgaaatcct
     1981 ctgccttgtt tcgaggcaag aaaaggctct aaggttctgc ccagtgctga gcagctcaag
     2041 aacggaccac tcttccagca ctgaagggag gggcaggagg gaacagcacg caccgagctt
     2101 ttagccattg gctctgagga gccctgcctg tgtttacacc agtttaaaat tgaagctagt
     2161 tacctccaag cagcacagcc tgagcaggtc attggaggag gcagcagcat gcttgggaga
     2221 ggctgccact ctcaccaact caaggtgttc cacgactgtt taagggacaa gtgctgtcag
     2281 tgcaggctgg ggccaggctt gctcagttct actcaaattc ttatatttag gcacaattat
     2341 ttataaggga aaacaagagg ccaaatacag tgacggaggt tccaaataat tatgtgccct
     2401 ttgcactagg agactgttag aggattacta ataaaatgac cacaggcatt gtggcagaag
     2461 tgatgcagtc cctcatgtgt ccttgtgatt ctagttgcta tagaccattt aagacaactt
     2521 attttaaaca tagaaaagta ggacatttta taattgcttg cattggcttg ctgctatatt
     2581 cccatcttat tgattaactc aataaaccga aatgccttca
//
