LOCUS       NM_001191971            3238 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus serine threonine kinase 31 (Stk31), mRNA.
ACCESSION   NM_001191971 XM_575472
VERSION     NM_001191971.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Zhou,J., Stein,P., Leu,N.A., Chmatal,L., Xue,J., Ma,J., Huang,X.,
            Lampson,M.A., Schultz,R.M. and Wang,P.J.
  TITLE     Accelerated reproductive aging in females lacking a novel
            centromere protein SYCP2L
  JOURNAL   Hum Mol Genet 24 (22), 6505-6514 (2015)
   PUBMED   26362258
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Bao,J., Wang,L., Lei,J., Hu,Y., Liu,Y., Shen,H., Yan,W. and Xu,C.
  TITLE     STK31(TDRD8) is dynamically regulated throughout mouse
            spermatogenesis and interacts with MIWI protein
  JOURNAL   Histochem Cell Biol 137 (3), 377-389 (2012)
   PUBMED   22205278
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 17, 2010 this sequence version replaced XM_575472.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.22849.1,
                                           SRR26360181.660357.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                JAXUCZ010000004.1  79701741-79701812
            73-119              JAXUCZ010000004.1  79703743-79703789
            120-172             JAXUCZ010000004.1  79703878-79703930
            173-271             JAXUCZ010000004.1  79708804-79708902
            272-346             JAXUCZ010000004.1  79718326-79718400
            347-505             JAXUCZ010000004.1  79720016-79720174
            506-864             JAXUCZ010000004.1  79724419-79724777
            865-1039            JAXUCZ010000004.1  79726387-79726561
            1040-1155           JAXUCZ010000004.1  79729548-79729663
            1156-1315           JAXUCZ010000004.1  79730828-79730987
            1316-1438           JAXUCZ010000004.1  79731811-79731933
            1439-1618           JAXUCZ010000004.1  79747596-79747775
            1619-1735           JAXUCZ010000004.1  79748227-79748343
            1736-1855           JAXUCZ010000004.1  79748695-79748814
            1856-1987           JAXUCZ010000004.1  79750279-79750410
            1988-2089           JAXUCZ010000004.1  79752848-79752949
            2090-2170           JAXUCZ010000004.1  79754026-79754106
            2171-2296           JAXUCZ010000004.1  79755970-79756095
            2297-2425           JAXUCZ010000004.1  79757333-79757461
            2426-2512           JAXUCZ010000004.1  79757632-79757718
            2513-2662           JAXUCZ010000004.1  79758583-79758732
            2663-2785           JAXUCZ010000004.1  79763641-79763763
            2786-2854           JAXUCZ010000004.1  79792902-79792970
            2855-3238           JAXUCZ010000004.1  79796698-79797081
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..3238
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /note="serine threonine kinase 31"
                     /db_xref="GeneID:500120"
                     /db_xref="RGD:1564384"
     exon            1..72
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..3079
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /EC_number="2.7.11.1"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 31"
                     /protein_id="NP_001178900.1"
                     /db_xref="GeneID:500120"
                     /db_xref="RGD:1564384"
                     /translation="MWGQRLFAGTAVAESVSFPGLVQMDEDTHYNKVEDVVGSHVEDA
                     VTFWAQNVSRNKDIMKIGCSLSEVCPHANSVFGNLDPKKIYGGLFSEDKCWYRCKVLK
                     TISDDKCLVRYIDYGNTEILNRSDIVEIPPELQFSSIAKKYRLWGLQIPSGQEVTQFD
                     QGRTFLGSLIFEKEIKMRIKATYQDGTVIAQAEYGTVDIGEEVAKKGFAEKCRLTSGI
                     DASEAKKPDPNQLALRSLKNPIPLWGRRSNQSTFSRPKGHFNGRLTLDVKYETNAGNH
                     VTFPKESLAAGDFNLGSNVSLAKIKQDQKLIEENEKLKTEKEVLLENYKALELKVEQT
                     AQELQQEKTATMDLTKHLESTLKTCVGTRLKNLAAKVELLKEIRHINISIRFGNDLSD
                     AMQVLDEGSFTTLASLSELEKIWAEYNVAQEKIQTCPNENEGNILIAERNEVQQKLFV
                     AVDVFILEVDELPLDKRLKTLQDLATSLESVYGKAKEGTNSEEILRKFYDWQCTKREE
                     FASIRSETEASLQHLVAWFQNSQKVFDLSLDEPLTSEDMIGNIDEILEKTESCVCKEL
                     ELSLIEQGVVDKEIILSTYSQVLQRIHSEEKFIATMLSKYKDSVEFKKQIIDCLNKSP
                     SVDYLLSIKKTLKGLKAQLRWKLVEKSNLEESDDHDGTEIEKIKQEITQLRSSVFQEI
                     YHEREEYEKLNSLTQKWFPELPLLYPEIGLLKYMNSGGLLTMSLERDLLDTEPMKELS
                     SKRPLVCSEVNGQPVLLKGYSVDVDTEGRVIQRAASYHRACGYAKEEESGLLPLIFLF
                     MCKSDPVAYLMVPYYPKANLSAVQASMPLTSEEALKVMKGVARGLHTLHSANIIHGSL
                     HQNNVFALNREQGIVGDFDFTKSESQRASVNMMVGGLSLLSPELKIGKPPSASSDLYA
                     YGCLLLWLSVPNQEFETNEDGIPKVDQFHLDDNVKSLLCSLIYFRSSMTAEQVLNAEC
                     FLLPKGKTIPNTEKEIEYTQHNKEDESKIESLDRYKEKARNGEANP"
     exon            73..119
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            120..172
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            173..271
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            272..346
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            347..505
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            506..864
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            865..1039
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1155
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1315
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1316..1438
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1439..1618
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1619..1735
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1736..1855
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1856..1987
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            1988..2089
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2090..2170
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2171..2296
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2297..2425
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2426..2512
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2513..2662
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2663..2785
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2786..2854
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
     exon            2855..3238
                     /gene="Stk31"
                     /gene_synonym="RGD1564384"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggctgtggg tggagcgctg gcatgtgggg ccagcggctc tttgctggta cggctgtggc
       61 agaaagtgtg agttttccag gacttgtcca aatggatgaa gatacacatt acaataaagt
      121 tgaagatgtt gttggaagtc atgtagaaga tgcagtaacg ttttgggccc agaatgtcag
      181 tagaaataag gatattatga agattgggtg ttcactttcg gaagtttgtc ctcatgctaa
      241 ttcagttttt gggaatcttg atcctaagaa gatttatggt ggattgtttt ctgaagataa
      301 gtgctggtac agatgcaaag tgctaaaaac tatcagcgac gataagtgcc tggtgaggta
      361 catagactat ggaaatactg aaattctaaa ccgatctgat atagtagaaa ttcctccgga
      421 gctacagttt tctagtattg ccaagaagta tagactttgg ggactacaga ttccttctgg
      481 tcaagaagtt acccagtttg atcagggcag aacatttttg gggagtttga tttttgaaaa
      541 agaaattaaa atgagaatta aagcaaccta tcaagatgga acagttattg ctcaggctga
      601 gtacggcact gtcgatatag gggaagaagt ggcaaagaaa gggtttgcag agaagtgcag
      661 actgacctca ggcattgatg cctctgaggc aaagaaacca gatcctaatc agcttgctct
      721 caggagtctc aagaacccta tccccctgtg gggacgcaga tcaaaccagt cgaccttcag
      781 caggccaaag gggcatttta atgggaggct gactcttgat gtgaagtatg agactaatgc
      841 aggaaatcac gtgacatttc caaaggaaag tttggcggct ggtgacttta atttagggtc
      901 taatgtcagc ttggcaaaaa ttaaacagga ccagaaactt attgaagaga atgaaaagct
      961 taaaacagag aaagaggttc ttctagaaaa ttataaggct ttagaattga aagttgaaca
     1021 gactgcacaa gagcttcagc aagagaaaac agctaccatg gatctgacta agcatttaga
     1081 aagcactctg aagacgtgtg taggaaccag gctgaagaat ctggctgcta aagtagaact
     1141 attgaaagaa attagacata ttaacatcag tattcgcttt ggaaatgacc tttcagatgc
     1201 tatgcaagtg ttggatgaag ggtcctttac tactctagca tctttgagtg agttagagaa
     1261 aatttgggct gaatataatg ttgctcagga gaagatccaa acttgtccta atgagaatga
     1321 aggtaatatt ttgattgctg aaaggaatga agtacaacag aagctgttcg tggctgtaga
     1381 tgtttttatt ctggaagtag atgagttacc acttgataaa cgcttaaaaa cattgcagga
     1441 tttagcaact tctttagaat cagtgtatgg gaaggccaaa gaaggaacta actctgaaga
     1501 aatactcagg aagttttatg actggcagtg taccaaaaga gaagagttcg ccagtattcg
     1561 gagtgagaca gaggcttctc tgcagcatct cgtggcatgg ttccagaaca gccagaaggt
     1621 ttttgatctg tctttggatg aaccactgac ttcagaagac atgattggta atattgatga
     1681 aattctagag aagactgagt catgtgtctg taaagagcta gagctgtctc tcattgagca
     1741 aggtgttgta gacaaggaga ttattttaag tacatacagt caagtgcttc aaaggatcca
     1801 ttctgaggaa aagtttattg ccaccatgct gtccaagtat aaggacagtg ttgagtttaa
     1861 aaagcagatc attgactgtt taaataagag ccccagtgtg gattacttgc tatccattaa
     1921 gaagacattg aaaggcttaa aagctcaact gagatggaag ttggttgaga agagtaattt
     1981 ggaagaatct gatgaccatg atggaactga aattgagaaa ataaagcaag aaataacgca
     2041 attgcgcagt agtgtctttc aggaaattta tcatgagagg gaggaatatg agaaactgaa
     2101 cagcttgacc cagaaatggt tccctgagct gcctctgctg tatcctgaaa taggattgct
     2161 taaatatatg aattctggtg gtcttcttac tatgagctta gagcgcgacc ttcttgacac
     2221 tgagcccatg aaggaactta gcagcaagcg tcctctggtg tgctctgagg ttaatgggca
     2281 gcctgttctc ttaaagggct attctgtgga tgttgacaca gaaggaaggg tgattcagag
     2341 agcagcctcc tatcatagag cttgtggata tgccaaagaa gaagaatctg ggttactgcc
     2401 attaatattc ctgtttatgt gtaagtctga tcctgttgcc tatctgatgg tcccgtatta
     2461 ccctaaggca aacctaagcg cagttcaagc cagtatgcct ttaacttcag aagaagcttt
     2521 aaaagtcatg aaaggtgttg cccgaggact gcatacattg cacagtgcta acataattca
     2581 tggatcactt catcagaaca atgtatttgc cttaaatcgt gaacaaggaa ttgttggaga
     2641 ttttgacttc accaaatctg agagccagag agcttcagtg aacatgatgg ttggtggatt
     2701 gagtttgctg tcaccagagt tgaaaattgg aaaacctcct tctgcaagtt cagacttata
     2761 tgcttatggc tgtcttttat tatggctttc tgttccaaat caagagtttg agacaaatga
     2821 agatggaatt ccaaaagtag atcagtttca tttggatgat aatgtcaagt ccctcctctg
     2881 tagcttgata tactttagaa gttcaatgac tgctgaacaa gttttgaatg cagaatgttt
     2941 cttgcttcca aaggggaaaa caattccaaa cacagaaaaa gagattgaat atactcagca
     3001 taacaaagaa gatgaatcaa agatagagag tttggataga tataaagaaa aggcaagaaa
     3061 tggggaagcc aacccttgac tgacagatta gtcctttgtt gttgctgtat atgtcccttt
     3121 aaaaactttg ttctgtttgc ttagtagaca aaaatgtgtg taaatgttct ggaactagtt
     3181 ggattgcatc tttggactcg ggtcataaaa aataaaagac atgttttggt tatgcctg
//
