LOCUS       NM_001106922            3669 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus serine/threonine kinase 11 interacting protein
            (Stk11ip), mRNA.
ACCESSION   NM_001106922 XM_001058404 XM_237307
VERSION     NM_001106922.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3669)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
REFERENCE   2  (bases 1 to 3669)
  AUTHORS   Smith,D.P., Rayter,S.I., Niederlander,C., Spicer,J., Jones,C.M. and
            Ashworth,A.
  TITLE     LIP1, a cytoplasmic protein functionally linked to the
            Peutz-Jeghers syndrome kinase LKB1
  JOURNAL   Hum Mol Genet 10 (25), 2869-2877 (2001)
   PUBMED   11741830
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168233.1.
            
            [WARNING] On Aug 5, 2024 this sequence was replaced by
            NM_001106922.3.
            
            On Sep 4, 2008 this sequence version replaced NM_001106922.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168233.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q33"
     gene            1..3669
                     /gene="Stk11ip"
                     /note="serine/threonine kinase 11 interacting protein"
                     /db_xref="GeneID:301535"
                     /db_xref="RGD:1305046"
     exon            1..304
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..3462
                     /gene="Stk11ip"
                     /codon_start=1
                     /product="serine/threonine-protein kinase 11-interacting
                     protein"
                     /protein_id="NP_001100392.2"
                     /db_xref="GeneID:301535"
                     /db_xref="RGD:1305046"
                     /translation="MTTAPRDSVVWKLAGLLRESGDAVLSGCSTLSLLTATLQQLNRV
                     FELYLGPWGPGQTGFVALPSHPADSPVILQLQFLFDVLQKTLSLKLVHTPGVGLPGPI
                     KIFPFKSLRQLELRGVPIHSLCGLRGIYSQLETLVCNRSIQALEELLSACGGDLCSAL
                     PWLALLSADFSYNALSNLDSSLRLLSALRFLNLSHNHIQDCKGFLMDLSELYHLDISY
                     NHLRLVPRMGPSGAALGTLILRANELRSLQGLEQLKNLRHLDVAYNLLEGHTELAPLW
                     LLAELRKLYLEGNPLWFHPAHRATTAQYLSPRARDAAHGFLLDGKVLSLKDLQQTSES
                     SRLGPMTQPLSWPVGSTTETSGGPELSDSLSSGGIVAQAPLRKVKSRVRVRRASISEP
                     SDTDPELRTLDPSPAGWFVQQHRELELLASFRERFGCDWLQYRSHLETMGSPPLATIK
                     TPALGTPPLDAQSLETARSPPAIGEDTKESPEKVSEEGREELEPHEEEREEQEREEGS
                     REDLGEEEEQEQKAVEAELCRPMLVCPLQGTEGVQGRECFLRVTSAHLFEVGLQAAQT
                     LERLELQSLVSAELQSETESQREPGSEGSGPPSGAPVLVLRFSYICPDRQLRCYAVLE
                     PEAHEAIQELLAVLTPFTSVKDQQPGEAKDPQGPRFQCLRCSCEFKPQEPRLGLESDD
                     GWKPLFQNTESPVVCPNCGSDHVVLLAVSGEVPNRERNQEEQSSDSACDLADHSGCPS
                     VPDGIPPQASISHGCSSWNLSPTLGHTGFRSVDHRLRLFLDVEVFSDSEEEFQCCTKV
                     PVVLAGHTRESLCLVVVSDRMLYLLKVTGPICGPPASWLEPTLAIPLQDLSGMELGLA
                     GQSLRLEWAAGTGHCVLLPRDARQCRAFLEELTGVLQSLPRTQRNCISATEETVTPQH
                     RLWPLLGKDTSAETPQFFYLRAFLAEGSSTCPVSLLLTLSTLYLLDEDPVRSHAESPL
                     PVGSGEASEQPAPQGPGPSLQVREQQPLSSLSSVQLYRTSPLDLRLIFYDEVSRLESF
                     WALRVVCGEQLTDLLAWIREPWEELFSIGLRTVTQEALDLDR"
     exon            305..510
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            511..585
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            586..681
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            682..789
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            790..861
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            862..988
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1092
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1188
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1230
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1380
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1381..1465
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1466..1816
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            1817..2022
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2023..2139
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2140..2317
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2318..2530
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2531..2634
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2635..2732
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2733..2911
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2912..2993
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            2994..3064
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            3065..3312
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            3313..3463
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
     exon            3464..3646
                     /gene="Stk11ip"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgctctaaa ggagtctgac tgccaaagtg attggagtgc gggtcacgag ggcccatggg
       61 ctccggaggt cctatgtttt tggaaagggg gccagagaag acgtccttta tagctgttgc
      121 ttacttttta cattgcacga cgcctccatt tgcacgaaag ctctgggttt ttgtcgacac
      181 cgcccacctg aggctcttcc gcttcccctt ttcccaggct ccgcccccca gcgtcccgtg
      241 gctatgacga ccgccccgcg ggactcagta gtgtggaagc tcgcgggact tttgcgggag
      301 tcgggggatg cagttctctc tggctgtagc acactgagcc tgctaacagc cacactgcag
      361 cagctgaaca gagtgtttga actgtaccta gggccatggg gccccggcca gacaggcttt
      421 gtggctcttc cctcccaccc tgcagactca ccagtcatcc tccagcttca gttccttttc
      481 gatgtgctgc agaaaacact gtcactcaag ctggtccaca cccctggtgt tggccttcca
      541 gggcctatca agattttccc cttcaagtcc cttcgacagc tggagcttcg aggagtccct
      601 atccacagcc tgtgtggcct ccgtggcatc tactcacagc tagagaccct ggtttgtaac
      661 agaagcatcc aggcactaga ggagctcttg tcggcctgcg gtggggacct ctgctctgcc
      721 ctcccctggc tagccttgct ctctgccgac ttcagctaca atgcacttag caacttagac
      781 agctccctgc gactcctgtc cgctctgcgc ttcctcaacc tgagccacaa ccatatccag
      841 gactgcaaag gcttcctgat ggacttatct gagctgtacc atttggacat ctcctataac
      901 cacctgcgct tggtgccaag aatgggaccg tcaggggctg ctctggggac tctgatcctg
      961 agggccaatg agcttcggag ccttcagggc ctggagcagc tgaagaacct gcggcatctc
     1021 gatgtggcct ataaccttct agaaggacac acagagctgg caccactatg gctgctggct
     1081 gagctccgta agctctatct ggaaggtaac cctttgtggt tccaccctgc gcaccgggca
     1141 accaccgctc agtacttgtc acctcgggcc agagatgctg ctcatggctt ccttcttgat
     1201 ggcaaggttt tgtccctgaa ggatcttcag cagacttcag aatcttcacg gcttggtccc
     1261 atgacccaac ctttgtcctg gccagtgggg agtaccactg aaacctcagg tggccctgag
     1321 ctgagtgata gcctctcctc agggggcatt gtggcccagg ctccacttcg taaggttaag
     1381 agccgagtcc gtgtgaggcg ggctagcatc tctgagccca gtgacacaga cccagagctt
     1441 cgaactctgg acccctcccc ggctgggtgg tttgtgcagc aacaccggga acttgagctg
     1501 ctggccagct tccgggagcg gtttggctgt gactggctgc agtataggag ccacctggag
     1561 accatgggga gcccccctct tgccaccatc aagactcctg cccttggaac ccctcctctg
     1621 gatgcccaga gcctggagac tgcacgcagc cctccagcga taggggaaga cactaaggaa
     1681 tcgccagaga aggtgtcaga ggaaggcagg gaggagctcg agccccacga agaagagagg
     1741 gaagagcagg agagagaaga gggatcgaga gaggacctgg gggaggaaga ggagcaggag
     1801 cagaaggcag tggaagcaga gctctgtcgc cccatgttgg tgtgtccctt gcagggaact
     1861 gagggcgtgc aaggaaggga gtgctttctc cgggtcactt ctgcccactt gtttgaagtg
     1921 ggactccaag cagcccagac tctggagcgg ctggagctac agagcctggt gtcagctgag
     1981 ctacagtcag agactgaaag ccagagagaa ccagggtctg agggctcagg cccaccctct
     2041 ggggctccag ttcttgttct gcgcttttcc tacatttgtc ccgaccggca gttgcgttgc
     2101 tatgctgtgc tggagccaga ggcccatgaa gccatccagg agctacttgc tgtactgacc
     2161 ccattcacca gcgtgaaaga ccagcagcct ggggaggcca aggacccaca ggggcccaga
     2221 ttccagtgcc tgcgctgtag ctgtgagttc aagcctcagg agcccaggtt gggactggag
     2281 agtgacgacg gctggaagcc tctgtttcaa aatacagaat ctcctgttgt gtgtccaaac
     2341 tgtgggagtg accatgtggt tctcctagct gtgtctgggg aagtccctaa tagagagcgg
     2401 aaccaggaag aacaatcatc agattctgcc tgtgaccttg ctgaccacag tggctgtccc
     2461 agtgtgcctg acggcatccc acctcaggca tccatatccc atggctgcag cagctggaac
     2521 ctcagcccga cccttggaca cacaggtttt cgatctgtgg accaccgact ccggctcttc
     2581 ctggatgttg aggtgttcag tgactccgag gaggagttcc agtgctgcac caaggtgccg
     2641 gtggtgttag caggccacac gagggagtct ctgtgccttg tggttgtgtc tgaccgtatg
     2701 ctttacctgt tgaaggtgac agggcccatc tgcgggcctc ctgctagctg gcttgagccc
     2761 accctggcca ttcctctgca ggatctgagt ggcatggagc ttggccttgc aggccagagc
     2821 cttcgtttag agtgggcagc tgggactggc cactgtgtgc tgctgccccg agatgccagg
     2881 cagtgccgtg ccttccttga ggagctcact ggggttttgc agtctctgcc tcgtacccag
     2941 aggaactgca tcagtgctac agaggagacg gtgaccccgc agcatcggct ctggccattg
     3001 ctggggaaag atacttccgc agagacgccc cagtttttct accttcgcgc cttcctggct
     3061 gaaggctcct ctacctgtcc tgtgtccctg ttgctgacgt tgtccacctt gtacctatta
     3121 gatgaagacc ctgtaaggtc ccatgcagaa tctcccctcc cagtggggtc tggtgaagcc
     3181 tctgagcagc ctgctcccca ggggccaggt ccttctttgc aggtcaggga gcagcaacca
     3241 ctcagcagtc tgagctctgt gcagctgtat cgcacaagcc ccttggacct gcggctgatc
     3301 ttctacgatg aggtgtctcg gctggagagt ttctgggcac tccgtgttgt gtgtggggag
     3361 cagctgacag acctgctggc ctggattcgg gagccctggg aagagttgtt ttccattgga
     3421 ctccggacag taacccagga ggctctggac ctcgaccgat aagggtctca ccatgtaaca
     3481 ttggctggtc tagaactggc tatgtagacc aggctggctt tggattcatg gagacctgac
     3541 tgcctctaag tgctgagatg aatggctgag ccaccaactg tgaaaaaatt gtgaacttcc
     3601 cctcttccta aaagtttaca ttttaaataa agacctccaa taaaaaaaaa aaaaaaaaaa
     3661 aaaaaaaaa
//
