LOCUS       NM_001107950            3612 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus STING1 ER exit protein 1 (Steep1), mRNA.
ACCESSION   NM_001107950 XM_001062744 XM_233309
VERSION     NM_001107950.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3612)
  AUTHORS   Verkerk AJMH, Zeidler S, Breedveld G, Overbeek L, Huigh D, Koster
            L, van der Linde H, de Esch C, Severijnen LA, de Vries BBA,
            Swagemakers SMA, Willemsen R, Hoogeboom AJM, van der Spek PJ and
            Oostra BA.
  TITLE     CXorf56, a dendritic neuronal protein, identified as a new
            candidate gene for X-linked intellectual disability
  JOURNAL   Eur J Hum Genet 26 (4), 552-560 (2018)
   PUBMED   29374277
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473991.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233309.3, XM_001062744.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5756307, SAMN12840115
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq34"
     gene            1..3612
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /note="STING1 ER exit protein 1"
                     /db_xref="GeneID:313433"
                     /db_xref="RGD:1564541"
     exon            1..87
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            88..380
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     CDS             257..925
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /note="UPF0428 protein CXorf56 homolog"
                     /codon_start=1
                     /product="STING ER exit protein"
                     /protein_id="NP_001101420.1"
                     /db_xref="GeneID:313433"
                     /db_xref="RGD:1564541"
                     /translation="MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQ
                     LEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETTYLRRPEGIERQYRKKCAKCGLPLFY
                     QSQPKNAPVTFIVDGAVVKFGQGFGKTNIYTQKQEPPKKVMMTKRTKDMGKFSSVTVS
                     TIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLID
                     NQFK"
     exon            381..498
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            499..540
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            541..679
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            680..769
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            770..862
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
     exon            863..3612
                     /gene="Steep1"
                     /gene_synonym="RGD1564541"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccttcaactg tcgggaattt aaaagggaaa cgcatgggct ccacttgcgg atttgaagag
       61 gaacccctgc gaagttttct ttttatacag cctcccccgc ctccccctgc atctcagcgg
      121 gatgggatgt tccggaagtt aatcaagccg gtatcaacac gtgaccaggg tggggaaacg
      181 gtctggcgcg agtgtctgtg acgccatctc gccgcgactc attttcttcg acttttctgc
      241 ctgttctgcc ggagctatgc cgaaagtcgt atcgcggtcc gtggtctgct cagacacccg
      301 ggaccgcgag gaatatgatg atggcgagaa gcccctccat gtttactact gtttatgcgg
      361 acagatggtc ctggtgctgg attgccagtt agagaaattg cccatgagac cccgggaccg
      421 gtctcgcgtg atcgatgctg ccaaacacgc tcataagttt tgtaacacag aagatgagga
      481 gactacttat cttcggaggc ctgagggcat tgaacgtcaa tacaggaaga agtgtgcaaa
      541 gtgtggactg ccgctcttct accagtctca gccgaagaat gctcctgtga ccttcattgt
      601 ggatggagca gtagtgaaat ttggccaagg ctttgggaaa accaatatat atactcagaa
      661 acaagagcct cctaagaagg ttatgatgac caaaaggact aaagacatgg gcaagttcag
      721 ctctgttact gtgtctacca ttgatgagga agaagaagag atagaggctc gggaagttgc
      781 tgactcctat gcacagaatg ccaaagtgat tgaaaaacag ctggagcgca aaggcatgag
      841 caagaggcgg ctgcaagagt tggctgaatt ggaagccaag aaagcaaaaa tgaaggggac
      901 cctgatcgac aaccagttca aataatcagg atctttctga actcagactg ggggcagcac
      961 ttacatcagg aagagtagct tcaagatctc atggtctggt ttctgtttgc cccaggactg
     1021 ttctctggca gtcccattgg ttttctgaca ctgtttatct tcttcttctt tttctttttt
     1081 ttcttttttt ttcttttttt ttttttcttt ttttcggagc tggggaccga acccagggcc
     1141 ttgcgctttc taggcaagcg ctctaccact gagctaaatc cccaacccct gtttatcttc
     1201 tttcattgaa gtccttgact ccatttcagg acgtagattg taaaatctct gtgtatgtgt
     1261 tttctaccct tcttgacttt gagatcagat cctgttacac gccagaggat ggccttgaac
     1321 tctctgagcc tcctatctta gcctctagta ctgaagttac aggaccgcat caccacgcct
     1381 ggcttctgca gcagtcctct tttcatttga agtacacttc tccgatgtag ctagaactag
     1441 ttagtaagtg tttgagtgtc tcttgtatct gaggtagatt tttttttctt caaagttgtt
     1501 gcagtgttta aagatttttt taaatatgta agtaggaaag tagcaaaaat taagtttaaa
     1561 attacagaca ggtagatgga tacttttacg aaactctgtc tctaatcttt aaactgttct
     1621 tagaatggac tgtggttgga atctttctcc tatcagtaga gaacagatag atacctgatc
     1681 tgcagaaata tttctttact caaccatgct atgtcagatt tcagaataaa agaaggaaaa
     1741 gccatgtggc tgggggtgta gctgggtagt agaatgcatg ctaggcatgt gtgaggacat
     1801 ctccagtaca aaaaaaaaat aggaaagcca gatcacagtt gctcagatag ctcaggtctg
     1861 attttaaata tggccttgat aagtagccca aaggcattag tgagtcagct gagagaatac
     1921 tctgtgagta cacggaagca gacatagtga gaatagctta tctgttgggc atctggtttt
     1981 atatttgcta tttgcagaag agcattttaa atgtgtcact ctccttcaat tatgtcaata
     2041 tccatgtgat tcttccatat tgttctctgt ttgcctgtat tgcaaggccc aaggagacat
     2101 ggaatgtgtt gtcctcctcg tgttgtctat gatgggttgc actttttaaa tactcaaggc
     2161 tcgttggtga ggtgttgcca ggaaataggg tttttttttt ttttgcctgt ttttctgttt
     2221 tttgtggggg agaggtgttg ccaggaaata gttttttttt tgcctgtttt tctggttttt
     2281 gtgggggaaa gctggttata gtagaggtac agttgagcta gcaataactg gacagacatg
     2341 gattggggat cctgggaatg tgaagagtgg aggtatgtta ccaccttccc agttattctg
     2401 cagcctgtag ggtcttttta tagctacttt ttaacctcat tttctgttct agttgtaaga
     2461 cagaatgaac atttgtgaat ggacaaatat gtccagacaa tggcctctac ctttacgcca
     2521 ttttatcccc aaattcttgg tatacaactt ggatatacca agaccacctt agaaattcag
     2581 gcttctattc tctggccacc gcctccaact atttctagtc tcatgtgctc ccatccttgt
     2641 agaccttttt agatgtgatt tttgatttga ggggtgatta ttttgctagt aataatgaaa
     2701 cataattgtg gcaatagcac cattaatact cactcgtctc tattgagtac ctggttgtag
     2761 gaagcacttt aaaggcatta gctcacctcc taggagataa gataaccgtt gtcatcactg
     2821 ttagataaac tagtactctg aagctctgaa ttttcctctc ccaagatcta ctggccagta
     2881 actagtaaaa tcagaagact gactttaaaa ctcaaactct ttcctgtgct gaactgctgc
     2941 ttctgtagaa tcttgtatca tttgatcaga acataatttc attttgaaaa aaccactgaa
     3001 gtgcaatgta aaatattcag ctggagaacc ccctaaagca attctgtagt taatgcttct
     3061 acgtattttc tgagataact cgctcttaga gaaagtctag ccatttgaac atctggctca
     3121 agttacacat tttgctgctc gaaggataat gaaatactat gtcattagta tcaagtaagt
     3181 gtatactttt cattatattt tactcttttt attggaagtt attaaaagat gtactttctc
     3241 tattctttat taacttccag tgatttttat agcaaatgtg ttttaatatt aataagagga
     3301 gccatattga catttggaaa gtcggaactc ttgttctttt cttccttttg caaatgatca
     3361 actgtggcaa aattatgaaa atgttatgaa atattcttac tctaatagtt ggtgacattt
     3421 ggaattgtaa ctgtcattta agaaaaatta aaaagctttt taaagactaa cctgtcttgt
     3481 tgggggtgct gacatgtatg aatagttcta acacttagga ggatcacttt gttcaggagt
     3541 tcgagaccaa tctgagcgcc atagcaagca aaactctctt taaaatgaaa taaaataaat
     3601 aataatggaa tg
//
