LOCUS       NM_001192011            1202 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus StAR-related lipid transfer domain containing 5
            (Stard5), mRNA.
ACCESSION   NM_001192011 XM_577816
VERSION     NM_001192011.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Fu,H.Y., Jing,J., Yi,N., Yu,S.C., Yun,S.F., Liang,Y.J. and Yao,B.
  TITLE     [Effect of StarD7 and Wnt/beta-catenin signal pathway on the
            testosterone secretion stimulated by Annexin 5 in rat Leydig cells]
  JOURNAL   Beijing Da Xue Xue Bao Yi Xue Ban 44 (4), 518-523 (2012)
   PUBMED   22898837
  REMARK    GeneRIF: StarD7 and beta-catenin both regulate the effect of
            Annexin 5 in testosterone production of rat Leydig cells.
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Rodriguez-Agudo,D., Ren,S., Wong,E., Marques,D., Redford,K.,
            Gil,G., Hylemon,P. and Pandak,W.M.
  TITLE     Intracellular cholesterol transporter StarD4 binds free cholesterol
            and increases cholesteryl ester formation
  JOURNAL   J Lipid Res 49 (7), 1409-1419 (2008)
   PUBMED   18403318
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jul 17, 2010 this sequence version replaced XM_577816.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ230578.1, DN934165.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000001.1  147015304-147015453
            151-200             JAXUCZ010000001.1  147016054-147016103
            201-333             JAXUCZ010000001.1  147016448-147016580
            334-451             JAXUCZ010000001.1  147020065-147020182
            452-545             JAXUCZ010000001.1  147021138-147021231
            546-1202            JAXUCZ010000001.1  147024514-147025170
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..1202
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /note="StAR-related lipid transfer domain containing 5"
                     /db_xref="GeneID:502348"
                     /db_xref="RGD:1561783"
     exon            1..150
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..693
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /note="StAR-related lipid transfer (START) domain
                     containing 5"
                     /codon_start=1
                     /product="stAR-related lipid transfer protein 5"
                     /protein_id="NP_001178940.1"
                     /db_xref="GeneID:502348"
                     /db_xref="RGD:1561783"
                     /translation="MDLSWATQESEAVAEKVLRYRRDASGWKKCREGNGVSISWRPSE
                     EFPGNLYRGEGILCGTPEEVWDCVKPVAGGLREKWDDNVNSFEIVQSITDTLCVSRTS
                     TPSAAMKLISPRDFVDLVLVKKYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFC
                     EPLPGEPNKTHLVTFFQTDLNGYLPQSVVDSFFPRSMAEFYPNLQKAVRKFHH"
     exon            151..200
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
     exon            201..333
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
     exon            334..451
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
     exon            452..545
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
     exon            546..1202
                     /gene="Stard5"
                     /gene_synonym="RGD1561783"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccgtccagc agaacctgtg cggcacagct gggaccctgc accgtggcat aatggatctg
       61 tcctgggcca cgcaagagag tgaggcggtg gcagagaagg tgctccggta ccggcgggac
      121 gcgtcgggct ggaagaagtg ccgggaaggc aatggagttt caatttcctg gaggccatct
      181 gaggagtttc cagggaatct gtaccgggga gaagggattc tgtgtgggac accggaagag
      241 gtgtgggatt gtgtaaagcc agttgccggg ggccttcggg agaagtggga tgacaatgtg
      301 aacagctttg aaattgtcca aagcatcacg gatacgctgt gtgtgagcag aacctccacg
      361 ccctcagctg ccatgaagct gatttcgccc agggactttg tggacttggt gctagtgaaa
      421 aagtatgagg atggcaccat cagttccaat gctacccacg tggagcatcc attgtgtccg
      481 ccaaagcccg gttttgtgag aggatttaac catccatgtg ggtgcttctg tgaaccactg
      541 ccaggggagc ccaacaaaac ccacctggtc acattcttcc agacagacct gaatggctac
      601 cttcctcaga gtgtggtgga ctccttcttc cctcgcagca tggctgagtt ttaccccaac
      661 cttcagaagg ccgtgaggaa gttccatcac tgacagtcac ctattggcat ggaatgccga
      721 tggtccttca ggaactccag ctgttaagcc tcaaagaata cggaagaact gctgtggcct
      781 ttgagatgcc atagtaaaca gcaaatctca gggtaccctt ttggaagagc agcccatcgc
      841 cccactccac cctccttcct cttgggcttg gtgtggatgg acctgtccat cagcttggtg
      901 tggtgttcac aaatacctga caggccaggg aaggtcctgc tgtggccgcc tgagagatgg
      961 ctcaagtact ctgtgattcc ttgtggccca gagccctgtg tgctggctgc tatcagacac
     1021 cttgcccctg tgctggtctt aaagaatcat tatccatcgt ggtcactacg tcctgcttcc
     1081 tctggcatct ggagttccca gattcctctg tccctttcct gatatgcttt tgtatacaca
     1141 tttttagcac gagactttcc ccctttacaa aggtgtcaac ttgaaaaatg ttttaaacca
     1201 ca
//
