LOCUS       NM_001109121            3022 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus signal transducing adaptor molecule (Stam), mRNA.
ACCESSION   NM_001109121 XM_001067909 XM_001067952 XM_001067998 XM_574083
VERSION     NM_001109121.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Holleman J and Marchese A.
  TITLE     The ubiquitin ligase deltex-3l regulates endosomal sorting of the G
            protein-coupled receptor CXCR4
  JOURNAL   Mol Biol Cell 25 (12), 1892-1904 (2014)
   PUBMED   24790097
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Colombo M, Moita C, van Niel G, Kowal J, Vigneron J, Benaroch P,
            Manel N, Moita LF, Thery C and Raposo G.
  TITLE     Analysis of ESCRT functions in exosome biogenesis, composition and
            secretion highlights the heterogeneity of extracellular vesicles
  JOURNAL   J Cell Sci 126 (Pt 24), 5553-5565 (2013)
   PUBMED   24105262
REFERENCE   3  (bases 1 to 3022)
  AUTHORS   Blackstone C, Roberts RG, Seeburg DP and Sheng M.
  TITLE     Interaction of the deafness-dystonia protein DDP/TIMM8a with the
            signal transduction adaptor molecule STAM1
  JOURNAL   Biochem Biophys Res Commun 305 (2), 345-352 (2003)
   PUBMED   12745081
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168933.1.
            
            On Sep 4, 2008 this sequence version replaced NM_001109121.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168933.1, FQ221736.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.3"
     gene            1..3022
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /note="signal transducing adaptor molecule"
                     /db_xref="GeneID:498798"
                     /db_xref="RGD:1564499"
     exon            1..158
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     CDS             119..1762
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /note="signal transducing adaptor molecule (SH3 domain and
                     ITAM motif) 1"
                     /codon_start=1
                     /product="signal transducing adapter molecule 1"
                     /protein_id="NP_001102591.1"
                     /db_xref="GeneID:498798"
                     /db_xref="RGD:1564499"
                     /translation="MPLFATNPFDQDVEKATSELNTAEDWGLILDICDKVGQSRTGPK
                     DCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHP
                     KVCEKLKALMVEWTDEFKNDPQLSLISAMIKNLKEQGVTFPAIGSQAAEQAKASPALV
                     AKDPGTVATKKEEEDLAKAIELSLKEQRQQAAPLSTLYPSTSSLLTNHQHEGRKVRAV
                     YDFEAAEDNELTFKAGEVITVLDDSDPNWWKGETHQGMGLFPSNFVTADLTAEPEMIK
                     TEKKTVQFSDDVQIETIEPEPEPEPAFIDEDKMDQLLQMLQSTDPSDNQPDLPELLHL
                     EAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNEDPVYSVYAKSQSQ
                     QYYVQASGVSAPQVYPGPAQSGAYLVAGNAQMTHLQSYSLPPEQLASISQGAVPPSAT
                     PALPNQQAQASYPNAMVSSVQGNSYPSQASIYSPAAAAAAVAVTAVPVPADVTIYQNP
                     GPNMSQVPNYTLTSSTLPHTGGSQQPPQPQQAYSQKALL"
     exon            159..243
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            244..319
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            320..415
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            416..562
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            563..653
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            654..846
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            847..941
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            942..1036
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            1037..1124
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            1125..1179
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1333
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1509
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
     exon            1510..2997
                     /gene="Stam"
                     /gene_synonym="RGD1564499"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctgcactgg caatctccct tagtgttttt gtacctgagg ggcctccttt ctccgtcact
       61 tctcgagtgc cgcggtgtcg aggggcagtc cctggggaca cctcggcacg cagcggacat
      121 gcctctcttt gccaccaacc ccttcgacca ggatgttgag aaagcaacca gtgagttgaa
      181 tactgctgag gactggggcc tcatcttgga tatttgtgat aaggttggcc aatctcgcac
      241 aggacctaaa gattgtcttc gttctattat gagaagagtg aaccataaag acccccatgt
      301 tgctatgcag gctttaactc ttctaggagc atgtgtatca aactgtggca aaatttttca
      361 cttagaagtg tgttcaaggg atttcgctag cgaagtaagc aatgtgttaa ataagggcca
      421 tcctaaagta tgtgaaaaat taaaggctct tatggttgaa tggacagatg aatttaagaa
      481 tgacccacag ctaagtctga tatcggcaat gattaagaac ctcaaggaac agggtgtaac
      541 attcccagcc atcggctctc aggctgcaga acaagcgaaa gcaagcccgg ctctggtagc
      601 caaggaccct ggcactgtgg ctaccaaaaa ggaagaagaa gatttagcca aagctattga
      661 gttgtcgctc aaggagcaaa ggcagcaggc agcccccctc tccacgttgt acccaagcac
      721 atccagtctc ctcactaacc accaacatga aggcaggaaa gtccgcgctg tgtatgactt
      781 tgaggctgca gaggacaatg agctcacctt taaagctgga gaggtcatca cagtgcttga
      841 cgacagtgat cccaactggt ggaaaggtga aacacatcaa ggcatggggc tttttccttc
      901 taattttgta actgcagatc ttactgctga accggaaatg attaagacag agaagaagac
      961 ggtacaattc agtgacgatg ttcagataga gacaatagaa ccagaaccag aaccggaacc
     1021 agccttcatt gatgaggata aaatggacca gttgctacag atgttgcaaa gtacagatcc
     1081 cagcgataat cagccagact taccagagct acttcatctc gaagcgatgt gtcaccagat
     1141 gggacctctc attgatgaaa agctggagga catcgataga aaacactcag aactctcaga
     1201 actgaatgtg aaggtgatgg aggctctctc actgtatacg aagctaatga atgaagaccc
     1261 agtgtactct gtgtacgcca agtcccagag tcagcagtac tatgtgcagg cctctggtgt
     1321 gtccgctccc caggtatacc cagggcctgc tcagagcgga gcctatctgg ttgcagggaa
     1381 tgcccagatg acccatctcc agagctacag ccttcccccg gagcagctgg cttccatcag
     1441 ccaaggagca gttcctccct ctgcaacccc agcccttcct aatcagcagg cccaggcttc
     1501 ttacccgaat gcaatggtta gttctgttca aggaaattcg tatcccagcc aggcttcaat
     1561 atacagtcct gctgctgctg ctgccgctgt cgctgtcact gcagtgcctg tgcctgctga
     1621 tgtcaccatc taccagaatc caggacctaa catgtcccag gtgccaaact ataccttaac
     1681 gtcatcgacc ctgcctcaca caggaggcag ccaacagcca cctcagccac agcaagcata
     1741 ttctcagaag gctctgctat aggacttgat gctgctctgg gtggcctatt tctgctgagt
     1801 gccactgaca gtgttaggaa attcattaac atcctaagat ttgttttcct cagcttgtga
     1861 gagtctatct tggtcaagtt caaatactca agaaggtaga actgcttcag tttgcactga
     1921 ctttttagag gaatgctcct cccccgagga atgaaactac ttacaacatt tatttccttt
     1981 catgatatga agaattgtta caagattatt gtcttgtaaa attacctggt ctgcagcact
     2041 caaatgatca gaaactgctg tggcaaatgt tatgtacata tattgacatg taacttcctt
     2101 agcgaccttt gaattacagt ggtggtcatg tgaatatatt taacactgtt aaattaattt
     2161 acattgtttt attttaatca tgaacaacta tgtttgctaa tgttttgtgt aaatttaaga
     2221 taagtacact atctttttaa gctacaagag aagcaactcg tagcacattg acctgaaggc
     2281 attgtcctgt tatcgtgtca cattaaattg aacctttctt ttactaattg tgaacaaaac
     2341 atgtacgttg tatctttgtg tagcttctgc ccactggttg tcatcacacc agcatacagt
     2401 agccacattt tggtgcaatt agaggagaat aatgttccct ttaacccttt atattttggc
     2461 atgatgttcc aggtattgtg gaccatgaga caaaaattag tccttgtatt ttattttgaa
     2521 aaaggtgacg ttgatttact ttttcctagt tagtgtgatt aggttttaaa gccgtgtact
     2581 gtgtttattg gtagcagtga caccaaagac agagacgatg cacacgggga tcgttcagtg
     2641 ggcagcgatg aactaacact acaatgtcaa agtctcttgt aaagcgtacg ctataaacaa
     2701 gatctgattc tcctgtctta ccccactagg ttttttttta atgttgttga cacattgtat
     2761 cttttaattc tcattaaaat ggatataaat aggtgtttca aagtaattta tattctgatt
     2821 ttgtttaata gtgtatatat ttattgttgc tacaaactgg agtctaagtt tttccctctt
     2881 tgtctcactt gaagttctaa tagaattatt tttgcttatt taggagtaac tttaatgaat
     2941 tattgtaatt catataaaaa ttccattgat attttagtca taaatattta caattccaaa
     3001 aaaaaaaaaa aaaaaaaaaa aa
//
