LOCUS       XM_017594944            1524 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SH3 and cysteine rich domain 3
            (Stac3), transcript variant X3, mRNA.
ACCESSION   XM_017594944
VERSION     XM_017594944.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594944.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594944.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1524
                     /gene="Stac3"
                     /note="SH3 and cysteine rich domain 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 2 ESTs, 1 long SRA read, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 8 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:362895"
                     /db_xref="RGD:1308964"
     CDS             316..1386
                     /gene="Stac3"
                     /codon_start=1
                     /product="SH3 and cysteine-rich domain-containing protein
                     3 isoform X2"
                     /protein_id="XP_017450433.1"
                     /db_xref="GeneID:362895"
                     /db_xref="RGD:1308964"
                     /translation="MTEKEVVESPQPPFPGETPQSGLQRLKQLFKKGSPETTEMEPPP
                     EPQANGEAVGAGGGPIYYIYEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFC
                     DVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQKCFGKIPPGFHRAYSSPLYSNQQ
                     YACVSAANRNDPVFETLRVGVIMANKERKKGQADKKNPLAAMMEEEPESARPEEGKSQ
                     DGNDAEKDKKAEKKTPDDKNKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDD
                     SNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQK
                     GDEAGGYVKVYTGRKGFGYLVR"
ORIGIN      
        1 aacactcaga gaagagcagc tctgggggga tgggaggagt cagggtcgag ccctgcccca
       61 gacctcctgg ttccaatttc tgcctgtcag ctgtgctctc agctgtccac tgtcctccaa
      121 ctctgtcact tcagctctac caccacggtg agaggttcca aggcctacta atacagtctg
      181 catagctggt gtgggtccag aaggttgcag aaggggggct tacccagaag aaagagggct
      241 ggccctcccc agcagcacca tcgaggtctt agggacgccc tttccacagc gaactgattt
      301 agggagtctc aaaagatgac agaaaaggag gtggtggagt cccctcagcc cccctttcca
      361 ggagagactc cgcaaagtgg gctacagcga ctgaagcaat tattcaagaa gggctctcca
      421 gagacaaccg agatggagcc tcccccagag ccccaggcca atggagaagc cgtgggggct
      481 gggggtggcc ccatctacta tatctatgag gaagaagaag aggaggagga agaggaagaa
      541 ccacccccag aacctcctaa gcttgtcaat gacaagcccc acaagttcaa agatcatttc
      601 ttcaagaagc ccaagttctg tgatgtctgt gcccggatga ttgtgctcaa taacaagttt
      661 ggactccgct gtaagaactg caaaaccaac atccatgaac actgtcagtc ctacgtggag
      721 atgcagaaat gcttcggcaa gatcccacct ggtttccatc gggcctatag ctccccactc
      781 tacagcaacc agcagtatgc ttgtgtctct gctgccaatc gcaatgaccc tgtgtttgaa
      841 accctacgcg tcggggtgat catggcaaac aaggaacgga agaaggggca ggcagataag
      901 aaaaatcctc tggcagccat gatggaggag gagccagagt cagccaggcc agaggagggc
      961 aagtcacagg atggaaacga tgcagaaaag gacaagaagg ctgagaagaa aacacctgat
     1021 gataaaaaca agcaacctgg tttccagcag tctcattact ttgtggctct ctatcggttc
     1081 aaagccctgg agaaggatga tctggatttc ccaccagggg agaagatcac agtcattgat
     1141 gactccaatg aggagtggtg gcgggggaaa atcggagaga aggtgggatt cttccctcca
     1201 aacttcatca ttcgggtccg ggctggagaa cgtgtgcacc gtgtaaccag atcctttgtg
     1261 ggaaaccgcg agattgggca gatcactctc aagaaggacc agatcgtagt gcagaaagga
     1321 gatgaagctg gtggctacgt caaggtctac accggccgca agggcttcgg atacctggtg
     1381 cgctgagcat cctgcaccga taaggcccac acttcaggtc catccaaacc tcaagagctt
     1441 tggggtgagg gtggggaagc atctccataa ggaggggcag agctgtcaaa tgtttggaat
     1501 ttattaaagt tttgacaaaa gtta
//
