LOCUS       NM_017199                757 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus signal sequence receptor subunit 4 (Ssr4), mRNA.
ACCESSION   NM_017199
VERSION     NM_017199.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 757)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   2  (bases 1 to 757)
  AUTHORS   Hartmann,E., Gorlich,D., Kostka,S., Otto,A., Kraft,R., Knespel,S.,
            Burger,E., Rapoport,T.A. and Prehn,S.
  TITLE     A tetrameric complex of membrane proteins in the endoplasmic
            reticulum
  JOURNAL   Eur J Biochem 214 (2), 375-381 (1993)
   PUBMED   7916687
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from Z19087.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: Z19087.1, BC058482.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..757
                     /gene="Ssr4"
                     /note="signal sequence receptor subunit 4"
                     /db_xref="GeneID:29435"
                     /db_xref="RGD:62034"
     exon            1..225
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..680
                     /gene="Ssr4"
                     /note="translocon-associated protein subunit delta;
                     SSR-delta; TRAP-delta; signal sequence receptor subunit
                     delta; signal sequence receptor, delta; signal sequence
                     receptor 4"
                     /codon_start=1
                     /product="translocon-associated protein subunit delta
                     precursor"
                     /protein_id="NP_058895.1"
                     /db_xref="GeneID:29435"
                     /db_xref="RGD:62034"
                     /translation="MAAMASFGALALLLLSGLSCCSAEACLEPQITPSYYTTSDAVIS
                     TETVFIVEISLTCKNRVQNMALYADVSGKQFPVTRGQDVGRYQVSWSLEHKSAHAGTY
                     EVRFFDEESYSLLRKAQRNNEDVSIIPPLFTVSVDHRGTWNGPWVSTEVLAAAIGIVI
                     YYLAFSAKSHIQA"
     exon            226..344
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
     exon            345..419
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
     exon            420..509
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
     exon            510..575
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
     exon            576..733
                     /gene="Ssr4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaaacggac acgtcagtgc cgccagcgac gtcaccatgc ccgacccagc ccgccgacgc
       61 acgattgggt gctgaggccg cttacgcgtc gcgcttcctc gtctgctccg catgttcagg
      121 gcggcttgct ctcttttccc ctcggcagag aagaggcgat ggcggcgatg gcatctttcg
      181 gcgccctggc gctactcctg ctgtccggcc tatcttgctg ctcagcagag gcctgcctgg
      241 aaccccagat caccccttct tactatacaa cttcagatgc cgtcatttct acagagactg
      301 tattcatcgt ggagatctca ctgacctgca aaaacagggt ccagaatatg gctctttatg
      361 ccgacgttag tggaaaacaa tttcctgtaa cccgcggcca ggatgtgggt cgatatcagg
      421 tgtcctggag cctggagcac aagagcgccc atgcaggcac ctatgaggtc agattcttcg
      481 atgaagagtc ctacagcctc ctaaggaagg ctcaaagaaa taatgaagac gtttccatca
      541 tcccaccact gttcacagtc agtgtggacc atcggggtac ctggaatggg ccttgggtct
      601 ccacggaggt gctggctgca gcaattggca tagtgatcta ctacctagct ttcagtgcaa
      661 agagccacat ccaggcctga gggcagcaac ctcagccctc cattgcttct ttcaataaac
      721 agtcactatt tgaaaaaaaa aaaaaaaaaa aaaaaaa
//
