LOCUS       NM_031120               2940 bp    mRNA    linear   ROD 17-FEB-2024
DEFINITION  Rattus norvegicus signal sequence receptor subunit 3 (Ssr3), mRNA.
ACCESSION   NM_031120
VERSION     NM_031120.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Moser,K. and White,F.M.
  TITLE     Phosphoproteomic analysis of rat liver by high capacity IMAC and
            LC-MS/MS
  JOURNAL   J Proteome Res 5 (1), 98-104 (2006)
   PUBMED   16396499
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Hartmann,E., Gorlich,D., Kostka,S., Otto,A., Kraft,R., Knespel,S.,
            Burger,E., Rapoport,T.A. and Prehn,S.
  TITLE     A tetrameric complex of membrane proteins in the endoplasmic
            reticulum
  JOURNAL   Eur J Biochem 214 (2), 375-381 (1993)
   PUBMED   7916687
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000069.1.
            
            [WARNING] On Mar 28, 2024 this sequence was replaced by
            NM_031120.4.
            
            On Nov 27, 2020 this sequence version replaced NM_031120.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC062015.1, AY724496.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-155               JACYVU010000069.1  16097335-16097489   c
            156-282             JACYVU010000069.1  16096226-16096352   c
            283-381             JACYVU010000069.1  16085839-16085937   c
            382-513             JACYVU010000069.1  16080823-16080954   c
            514-2940            JACYVU010000069.1  16077425-16079851   c
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q31"
     gene            1..2940
                     /gene="Ssr3"
                     /note="signal sequence receptor subunit 3"
                     /db_xref="GeneID:81784"
                     /db_xref="RGD:621630"
     exon            1..155
                     /gene="Ssr3"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..580
                     /gene="Ssr3"
                     /note="SSR-gamma; TRAP-gamma; signal sequence receptor
                     subunit gamma; TRAP-complex gamma subunit; signal sequence
                     receptor, gamma"
                     /codon_start=1
                     /product="translocon-associated protein subunit gamma"
                     /protein_id="NP_112382.2"
                     /db_xref="GeneID:81784"
                     /db_xref="RGD:621630"
                     /translation="MAPKGGSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPI
                     WLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTR
                     KLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIVASFFILKNF
                     NPTVNYILSISASSGLIALLSTGSK"
     exon            156..282
                     /gene="Ssr3"
                     /inference="alignment:Splign:2.1.0"
     exon            283..381
                     /gene="Ssr3"
                     /inference="alignment:Splign:2.1.0"
     exon            382..513
                     /gene="Ssr3"
                     /inference="alignment:Splign:2.1.0"
     exon            514..2940
                     /gene="Ssr3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcctcaagtc ttttgctccg caatggctcc caaaggcggc tccaagcagc agtccgagga
       61 ggacctgctc cttcaggatt tcagccgcaa cctgtccgcc aaatcgtcgg cgctgttctt
      121 cgggaatgcg ttcatcgtgt ctgccattcc catctggttg tactggagaa tatggcatat
      181 ggatcttatc cagtctgctg ttctgtacag cgtgatgacg ttagtaagca cttacttggt
      241 agcctttgca tacaagaatg taaaatttgt tctcaagcac aaagtagcac agaagaggga
      301 agatgctgtt tccaaagaag tgacccgcaa actttctgaa gctgataata gaaagatgtc
      361 ccggaaggag aaagatgaaa gaatcctgtg gaagaagaat gaagttgccg attatgaagc
      421 tacaacattc tccatcttct ataacaacac tctgttcctg gttctggtta ttgttgcctc
      481 cttctttata ctgaagaact tcaaccccac agtgaactac attctgtcca taagtgcttc
      541 atctggactc atcgccctct tgtctactgg ctccaaatag actgtgtagc ttggccccct
      601 gcctttgtat ctaggggtgg cctgtggtat atgggaaagc atcagggtgg ccaggttggg
      661 agacacataa catgttttta tagtctggag tttgagggtt taaaaatgca gtagaatgta
      721 attcagtgtt tgtttattgg ctctttttga cagattgttg aaattgaatt gaattgaaag
      781 ggaaactcag agtaccaggg catttattaa aaggcaagaa gtcttgcaat gtgctctaat
      841 cacgaggaga aaataacttg tttcctacat ctgtcagagg tcatggtaac ctggactgag
      901 ctgttattat ttataatagg aggaagaagt taataactgg ttctctgtgt tccaagcaca
      961 atattacaac tttttgaact gtaaatctta gagtgaatcc tcttcctaag ggattaaaca
     1021 gaagcctcat tttttttttt taaacaaggc tccaaatttg taatttataa taactcaaaa
     1081 acatagcctc tccagtttga gggagggaaa cttgcggaat cttttttttt tttttttttt
     1141 ttttttaaag aaaggcagcc aaggtagtga cctaaaaata gtccccagac ctatgagtgt
     1201 tggcctgtga ggctaaagca cacactgttc agctgtatgg ctttgaccct gggtggccag
     1261 ggaggtcagc ttgaccctgc catgttggtt tgatgtgtga agtcactggg atcattgttt
     1321 ttgtgaccag gctctcagca ccatgggcag aatattaagt gagagagtat ttctatcctg
     1381 attattgaca cacgagagac caaaagaaat tttgtgaact tagccatgga attctgtgaa
     1441 ctctctgagg aatttacagt ggtttaaaat ggttgtcagc atttttccat gaggatttta
     1501 ataaattcag ccccttttgc tcaaggctcc tttcaattgt gaaatgttga tcgcattaga
     1561 tttttagggg tctagctaag agtagcctca tgtgtggtca ttcccccatg ttcttccccc
     1621 ttctattttg tacggttctg tctttgtgtg ctatgacttc ccagtttgga aattgctgta
     1681 ctatgatcac tgattacata ttccgagtta cttgctgttt accacaccca ggaactttct
     1741 ataaatggca cctcaaaggg aagtattact aatatctagt ttctgcttat aaacttaaga
     1801 gtaacatatg actatttcta actgtaatga tgtgcttacg aggagtagag ctgttctgtg
     1861 ctggtagatg ttctgtggtc tgtgctgaga acttagggaa ctcaggagga gtgcacacct
     1921 ccttactgtc tgccttgaga atcatttatc tccaagtggt cagttctttt cctgtgataa
     1981 cctcgttatc tgagtgccat tcccaggtaa tgaggaatga gtagggaaat gagtcaaagc
     2041 aaagtacatt ttggtaacac ataagaggta ggctgttttg ttgtttcttt tattttaatc
     2101 agtattgcct ggaaactttg tgtactagtg catttaccta gtaaaataat ttgatgcacc
     2161 accatcaagt tcccagagct gggccaaacc ttctatgtgg ctgctgtgaa tctgccacta
     2221 ggtggcggtg ccagagtaga tggggagaaa atcaccatca ttatttggac aatttggtca
     2281 atttctaact taaaagaaaa aaaaaaaaag gaatggtgaa ataggggtgc cagcctcaaa
     2341 tttttaattt taattagtaa tcaaaagttt gttgtgagag tgattatgca gttttctttt
     2401 gtcttgaatg tttccaatga ctgactgtct ttgtttttaa ctctcaaaat gtttagctct
     2461 ctctgtgcta ccaaatacat ttctctgtgt gaagtctgta gccgtatcat caactccctt
     2521 aaggaatcag tgtgtcagtc ctgtatgcta agtgtggacc ctcttctcca ccttgcacat
     2581 gttgcacata ggattacgaa gttcagtgag acataacagt gatcccgtgg cagagtttgt
     2641 acataaaagg accccataca tcatgctggt aaaataggac attcagaatg cacacacttc
     2701 tgttttttct cttatgtgat aggtagattc ttaatgttaa gcatttttat tttgtgattt
     2761 actccatttg taacttaata gtcttggatt taaatttaca atttgccctg tttggtattt
     2821 tgttttaatt tggaaaggat aattggaagt taactgaaat aatggaagtt gaatttatac
     2881 tctgcatttt tatgtaaagt cttgttatta ataagtatga ttaaactttg tttttaaaaa
//
