LOCUS       NM_001012217            2722 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus slingshot protein phosphatase 3 (Ssh3), mRNA.
ACCESSION   NM_001012217 XM_344984
VERSION     NM_001012217.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083600.1.
            
            On Feb 11, 2005 this sequence version replaced XM_344984.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083600.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2722
                     /gene="Ssh3"
                     /note="slingshot protein phosphatase 3"
                     /db_xref="GeneID:365396"
                     /db_xref="RGD:1308679"
     exon            1..146
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..2039
                     /gene="Ssh3"
                     /EC_number="3.1.3.16"
                     /EC_number="3.1.3.48"
                     /note="SSH-3L; SSH-like protein 3; slingshot homolog 3"
                     /codon_start=1
                     /product="protein phosphatase Slingshot homolog 3"
                     /protein_id="NP_001012217.1"
                     /db_xref="GeneID:365396"
                     /db_xref="RGD:1308679"
                     /translation="MALVTVSRSPPASGHSTPVGPTDRVIRRRGRLQRRQSFAVLRGA
                     VLGLQDGGEGNDAAEADPEPMEKPSGEEQPAEDQTDNGQGSQSPWKQVQKRHLHLMVE
                     LLRPQDDIRLAAQLEAARPPRLRYLLVVSTGEGLSEEETILLGVDFPDSSSHSCTLGL
                     VLPLWSDTQVYLDGDGGFSVTSGGQSRIFKPVSIQTMWATLQVLHQACEVALGSGLVP
                     GGSALAWATHYQEKLNSDQGCLNEWMAMSDLESFRPPNAEPGQASEQEQMEQAILAEL
                     WQVLDASDLDSVTSKEIRQALELRLGCPLQQYRDFIDNQMLLLMAQQDRASRIFPHLY
                     LGSEWNAANLEELQRNRVSHILNMAREIDNFFPERFTYHNVRVWDEESAQLLPHWKET
                     HRFIEDARAQGTRVLVHCKMGVSRSAATVLAYAMKQYGWGLEQALIHVQELRPIVRPN
                     PGFLRQLQTYQGILTASRQSHVWEQKVGVVSPEEPLAPEVSTPLPPLPPEPGGSGEGM
                     VMGQKGSQETPKEELGLRPRINLRGVMRSISLLEPSSEPESTTEAGDLPEVFSSDEEP
                     LHPFSQLSRAKGGQRVCKGPWPALKSRQSVVALHSAALVASRARAFQGQGQGQGQEQR
                     ETGTSSTPRLRKVIRQASVDDSREEGKA"
     exon            147..184
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            185..416
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            417..535
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            536..607
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            608..673
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            674..862
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            863..956
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            957..1085
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1132
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            1133..1279
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            1280..1480
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1754
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
     exon            1755..2692
                     /gene="Ssh3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgaaggcag ggactgaccg tatagttgtg ggaggggtcg tgccgggtgc tcgcccaggt
       61 gttcctggcc tgcctgcctt atggcgctgg tcacagtgag tcgctcgcca ccggcaagtg
      121 gccactccac gcctgtggga cccacggacc gagtgataag acgcagaggc cggctccaac
      181 gcaggcagag ttttgctgtt ctccgagggg ctgtcctggg acttcaggat ggaggggaag
      241 ggaatgatgc agctgaggct gaccctgagc caatggagaa gccctcaggt gaggagcagc
      301 ccgctgagga ccagactgac aacgggcaag ggtcccagag tccctggaaa caagtgcaga
      361 agcggcacct gcaccttatg gtggagctgc tgaggccaca ggatgatatc cgcctggcag
      421 cccagctgga ggcagcccga cccccaaggc ttcgctatct gctggtagtg tccacaggag
      481 agggtctgag tgaggaggag accatccttc ttggggtgga cttccctgac agcagttccc
      541 acagctgcac cctgggcctg gtcttgcccc tctggagtga tacccaggtg tacctggatg
      601 gtgatggggg cttcagtgtg acatctggtg gtcagagccg aatcttcaag cctgtctcta
      661 tccagaccat gtgggccaca ctgcaggtat tgcaccaggc atgtgaggtg gctctaggca
      721 gtggccttgt gcctggtggc agtgcccttg cctgggccac tcactaccag gagaaactga
      781 actctgacca gggttgcctc aatgagtgga tggccatgtc tgacctggag tcctttcgac
      841 cacctaatgc tgagcctgga caggcttcag aacaagagca gatggaacag gcaatcttgg
      901 ctgaattgtg gcaggtgttg gatgccagtg acctggacag tgttacgtct aaagagatcc
      961 gtcaggccct ggagctgcgt ctaggatgcc ctctccagca gtaccgtgac tttattgaca
     1021 accagatgct gctgctcatg gcccagcaag accgggcctc ccgcatcttc ccccacctct
     1081 acttgggttc tgaatggaat gctgccaacc tggaggaact tcagagaaac agggtaagtc
     1141 acatcctgaa catggcccgg gagattgaca acttcttccc cgaacgattc acctatcaca
     1201 atgtacgtgt ctgggacgaa gagtcagcac agctgctacc ccactggaag gagacacatc
     1261 gattcattga ggatgccaga gcacagggca ctcgggtgct agtccactgt aagatgggcg
     1321 tcagccgttc tgctgccacg gtactggcct atgccatgaa acagtatggc tggggcctcg
     1381 agcaagccct gatccacgtg caggagctcc ggcccattgt acgccccaac cctggcttcc
     1441 tgcgccagct acagacctac cagggcattc tgactgccag ccggcagagc cacgtctggg
     1501 agcagaaagt gggtgtggtc tccccagagg agcccttggc acctgaagtt tctacaccat
     1561 tgccacctct tccaccagaa ccagggggca gtggagaggg gatggttatg ggccagaaag
     1621 gaagccagga aaccccaaaa gaagagcttg gactgcggcc ccgcatcaac ctccgggggg
     1681 tcatgcgctc catcagtctt ctggagccct cctcagagcc agagagtacc acagaggctg
     1741 gagacctgcc agaagttttc tcttctgatg aagaacctct tcatcccttc tctcagcttt
     1801 caagagccaa aggtggccag cgggtctgca agggaccttg gcctgccctg aagtctcgac
     1861 agtctgtggt tgcccttcat agtgctgccc tggtggctag cagggcacga gccttccagg
     1921 ggcaagggca agggcagggc caagagcaga gggagactgg tacatcttct acacctaggc
     1981 tccggaaggt gataaggcag gccagtgtag atgacagcag ggaggagggc aaggcctgag
     2041 gccttatgcc atatccccac ctagacacta agcaatgatt ggtcactttg cattgggcct
     2101 gcacactccc tatagctcct tcccagcagt cctcagaccc ttgtcacttc ctgcaacctt
     2161 aggtctcaga cccatgtcta cctgttaagg gctcaagact ttttctacat agggtatggg
     2221 ttagaaccat tcaaggtgcc tttaagggta acaacaccct agtttcattt tacactcact
     2281 ctcttaacac tttgtgcagc cctggaatta aaaccggaaa tttttagggt gggttttcta
     2341 gttcacatct cccttgctct caactgctgg ccattccacc ctgtgtcttt taccctctcc
     2401 taccgcagtc ctacaggcag ctaggccagg gaaccagtgg ccacaaaggc agatagcact
     2461 ttcagccccc agtcccacag gctctgaggg ggctcccagg ttaccaccca cccacacaac
     2521 tgaccagagt ctctgccgtt gccctcattt ctcccatgcc ccacactggg tcacagggca
     2581 ctgagctaaa aagagagtct tcttgttctt gaagatctct ggctagtcaa gtttttcata
     2641 gtcgtatagt atctggcttt gtactgagaa ataaaagaca ttttcatatt aaaaaaaaaa
     2701 aaaaaaaaaa aaaaaaaaaa aa
//
