LOCUS       XM_006256980            2438 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine and arginine rich splicing
            factor 8 (Srsf8), mRNA.
ACCESSION   XM_006256980
VERSION     XM_006256980.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256980.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256980.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2438
                     /gene="Srsf8"
                     /note="serine and arginine rich splicing factor 8; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:317533"
                     /db_xref="RGD:1563383"
     CDS             79..2430
                     /gene="Srsf8"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RLIM-like"
                     /protein_id="XP_006257042.2"
                     /db_xref="GeneID:317533"
                     /db_xref="RGD:1563383"
                     /translation="MFNSEDPKLSRIMRCSHALLNVDGMTCLKVENLAYHTSSYTLKL
                     IFEDYGAVGDVFVPRNHLTEENYGFAFIHFYNNCDAKDAMHGLHGILLDGNKLKVQMV
                     HNDDLHYAQPDCGHGRQYHYEEENHELQKQYKRQHCSNTRIQTRSQSRLSPDNSESKS
                     QSCNHSHRKSASTNGSTTQSSLSTQKLPNRACPKSRNRPGEKKKPKSKSSCKSVSKYP
                     SGGGCLVIENMETKQNQVENVQSKSVFKKSCRSKGNAAHTLMASPSTTSQKRKRCRSP
                     QNLRESPRLESGANTAHVLNSGDSERGQLNSLQQSEKGMKMGIRECGFWTAKSQSNPS
                     NNDITGEVRFTFNKGNSNPQNDLSGLSCHDNNRKVQKQVDYQQPESTCVSPFTKEGNI
                     TEVLVEDTFSKDRSTRSKSPDMLILKETIESRLLPETKDMELVETHHCLSPETFKDLR
                     KDEAYFSSNSHTFLPLRDDLNISELRKLYFFASFPTREHILTESTAHRSQTTSVTPTN
                     FTTVEIDQKDTNLSSCYNQTGIQNSEKKSDEILKTNLDFTIVTTPCGTAGNIMTGVFE
                     VNDNFTEIDLESCDSLASQSNRKVQSGHSNISSSVSITNSNSTSNSNINNSLLSLLNY
                     SQQFLPVPNIIANNTIGNDINSPHTSQINKECDEFFLFHYPPLEARQQMHVISPEISN
                     DSDSWPLLPDFSNFNDIHNNHPKGLTKEQINTLPVKTFCENDKLNHCSICITPYTQNS
                     KIRVLPCFHEYHDKCIDRWLSDNSTCPICRKQIINPDDMEFLF"
ORIGIN      
        1 ggtcaactga accagagaaa acgctcatag ccattttttt ttctcctctt acagatccaa
       61 tgtattttcc attaaaaaat gttcaattca gaggatccaa aactatcaag gataatgcga
      121 tgctctcatg ctcttctcaa tgtagatgga atgacctgcc tcaaggttga aaaccttgcc
      181 taccacactt catcttatac cctgaagctc atatttgagg attatggggc tgttggtgat
      241 gtattcgtcc cccgaaatca tttaactgaa gagaactatg gctttgcctt catccatttc
      301 tacaacaact gtgatgccaa ggatgccatg catggcctac atgggatttt actggatggc
      361 aataaactga aggtacaaat ggtacacaat gatgatctac attatgctca acctgactgt
      421 ggccatggaa gacaatacca ttatgaggaa gaaaaccatg aattacagaa acaatataaa
      481 agacagcatt gttccaatac caggatccaa accagatctc agagcagatt gtctccagac
      541 aactcagaat ccaaatctca atcttgtaat cactcccaca gaaaatcggc atcaaccaat
      601 ggatccacga cccagtcctc actgtctact caaaagctgc caaacagggc ctgtccaaag
      661 tctagaaacc gcccaggaga aaagaagaaa cccaagtcta agtcttcatg taagagtgtc
      721 tccaagtatc cttcaggagg aggatgtctt gtgatagaaa atatggagac caagcaaaat
      781 caagtggaaa atgtacagtc caagtctgtg tttaaaaagt catgtcgatc aaaaggaaat
      841 gctgctcaca cattgatggc aagtccatct accacaagtc agaaaagaaa aagatgcaga
      901 agcccacaaa atttaagaga aagcccaagg ctggaaagtg gagcaaacac tgcacatgtt
      961 ctgaatagtg gtgattctga aagaggccag cttaactccc ttcagcaatc tgagaaggga
     1021 atgaaaatgg ggataaggga atgtgggttt tggacagcaa aaagtcagag taacccaagc
     1081 aataatgata tcactggaga agtgaggttt acctttaata aagggaactc aaatcctcaa
     1141 aatgaccttt cagggcttag ctgtcatgac aataatagga aagtccagaa acaagtggac
     1201 tatcaacaac ctgagtcaac atgtgtaagt ccatttacaa aagaaggaaa tataactgaa
     1261 gttttagtgg aagatacatt tagtaaagat agaagcacca gaagtaaaag tccagatatg
     1321 ctgatactta aagaaacaat tgaaagtagg ctacttccag aaactaagga tatggaacta
     1381 gtggaaactc atcattgttt atcacctgaa acttttaaag atcttaggaa ggatgaggct
     1441 tacttctctt ctaatagtca cacatttctg ccattgagag atgacttaaa catatctgag
     1501 ttgcgaaaac tatatttttt tgcatctttt ccaacaagag aacacatatt gacagagagc
     1561 actgctcata gaagtcaaac tacatctgta acaccaacta actttaccac tgtggaaatt
     1621 gatcaaaaag acacaaacct ctcttcttgt tataaccaga caggtataca aaattctgaa
     1681 aaaaaatctg atgaaatttt aaaaactaat ttagacttta caatagttac aactccttgt
     1741 ggaacagcag gcaacattat gacaggagtt tttgaagtaa atgataattt tactgagatt
     1801 gacttagagt cttgtgactc attggcgagt caaagtaata gaaaagttca atctggtcac
     1861 agtaatattt ctagttctgt ttccatcact aattcaaatt ctaccagtaa ttctaatata
     1921 aataactcac tgctttcttt gttaaattac agtcaacagt ttttacctgt tcctaatatt
     1981 attgccaata atactattgg caatgatata aattcaccac atacctcaca aattaacaaa
     2041 gaatgtgatg aattcttttt atttcattac ccacctttag aggccagaca gcaaatgcat
     2101 gttataagcc cagaaatatc taatgatagt gattcatggc cacttttgcc tgatttttca
     2161 aacttcaatg atattcataa taaccaccct aaaggactta ccaaagaaca gattaatact
     2221 ttaccagtaa aaacgttttg tgaaaatgat aaattaaacc actgcagtat ttgtatcaca
     2281 ccatatacac aaaatagcaa gattcgtgta ctaccttgct ttcatgaata tcacgataaa
     2341 tgcattgacc gctggttgtc tgacaactct acctgtccta tttgtcgaaa acaaataatt
     2401 aatcctgatg acatggaatt tctattttga gttctgga
//
