LOCUS       NM_001277394            3549 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus serine/arginine repetitive matrix 3 (Srrm3),
            mRNA.
ACCESSION   NM_001277394 XM_001065654 XM_003752581
VERSION     NM_001277394.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Feb 11, 2021 this sequence version replaced NM_001277394.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               JAXUCZ010000012.1  26514998-26515124   c
            128-384             JAXUCZ010000012.1  26484303-26484559   c
            385-486             JAXUCZ010000012.1  26480316-26480417   c
            487-615             JAXUCZ010000012.1  26468482-26468610   c
            616-696             JAXUCZ010000012.1  26468322-26468402   c
            697-726             JAXUCZ010000012.1  26467887-26467916   c
            727-789             JAXUCZ010000012.1  26465984-26466046   c
            790-825             JAXUCZ010000012.1  26465834-26465869   c
            826-876             JAXUCZ010000012.1  26464637-26464687   c
            877-981             JAXUCZ010000012.1  26463874-26463978   c
            982-1159            JAXUCZ010000012.1  26463160-26463337   c
            1160-1506           JAXUCZ010000012.1  26451770-26452116   c
            1507-1731           JAXUCZ010000012.1  26451244-26451468   c
            1732-1869           JAXUCZ010000012.1  26451002-26451139   c
            1870-3549           JAXUCZ010000012.1  26445718-26447397   c
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..3549
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /note="serine/arginine repetitive matrix 3"
                     /db_xref="GeneID:685890"
                     /db_xref="RGD:1587868"
     exon            1..127
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            128..384
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     CDS             152..2098
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /codon_start=1
                     /product="serine/arginine repetitive matrix protein 3"
                     /protein_id="NP_001264323.2"
                     /db_xref="GeneID:685890"
                     /db_xref="RGD:1587868"
                     /translation="MSSTVNNGATSMPAPPDAANGFPQPGGSSGSWPRAEEELRAAEP
                     GLVKRAHREILDHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKEGVL
                     TKEDRPGAHIVAETPRRMEGLEPGLEYPPFDEDDGPVDCDCPVACYRGHRGYRTKHWS
                     SSSASPPPKKKKKKKGSHRRSRKKRRLESECSCGSASPLRKKKRSVKKHRRDRSDSGS
                     RRKRRYRSRSLKSKRKEKIKERKRPHTESPGRRSHHHSSVSSHSPSVSSHYSDSGSPN
                     RLSPKHRDDGRKTGSQRSSGSRSLSPSGGSGWGSPQQNGGSRQRSGAHGGRPGSAHSP
                     PDKPSSPRACDKAAAAPTPPARGKDSQSPRSAPSSQGRGGRAAGGTARRRRRRRRRRR
                     SRSSANAPRRRGRRRAKPAPPRGSSRSLSGAHSSSDSGGGAPGPGPEPGSERGHGGHG
                     KRAKERPPRARPASTSPSPGAHGRRGGPEGNSSSRSPGPHPGSWSSSRSPSKSRSRSP
                     DKRTRSPSLSPSPKKPLGRDKDSEGRARHAEAEAARTRRRSRSYSPIRKRRRDSPSFM
                     EPRRITSARKRPIPYYRPSPSSSSSCLSSDYSSRSRSRSPSPGHSHGSYSSRSHGTRS
                     RSCSASRSRSPSYHSRSSSESGGF"
     exon            385..486
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            487..615
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            616..696
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            697..726
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            727..789
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            790..825
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            826..876
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            877..981
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1159
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1506
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            1507..1731
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            1732..1869
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
     exon            1870..3549
                     /gene="Srrm3"
                     /gene_synonym="RGD1307391"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgggaagac gggggcgcgg ggccgtgggg aggccacaga ggagccttgc caagcaaaag
       61 actcgggaca aacgggacct taaggcccgg ctccagcatc cagaagactg cagaggtcag
      121 ggaggagggc cggccgccga ggacctgtgt catgtcctcc accgtgaaca acggggctac
      181 cagcatgcca gctcctcccg acgctgccaa cggcttcccg cagcccggag gctcgtccgg
      241 gtcctggccg cgcgcggagg aggagctgcg cgccgccgag ccaggcttgg tgaagcgcgc
      301 gcaccgggag atcctggacc acgagcgcaa gcggcgcgta gagctcaagt gcatggagtt
      361 gcaggagatg atggaggagc aggggtactc agaggaggag atccggcaga aggtcgggac
      421 cttccggcag atgctgatgg agaaggaggg agtactgaca aaggaggacc ggcctggggc
      481 ccacatcgtg gcagagactc cgcgacgaat ggagggcttg gagcccggcc tggagtaccc
      541 acccttcgat gaggacgatg gcccggttga ttgcgactgc cccgtcgcct gctaccgcgg
      601 gcaccggggt tacaggacca agcactggtc cagcagctcc gcatcgcccc ctcctaagaa
      661 gaagaagaaa aagaaaggca gtcatcggag gagtcgcaaa aagaggagac tagagtcaga
      721 atgcagctgt gggagtgctt cccccctgcg caagaagaag agaagtgtga agaaacaccg
      781 tcgagatagg tctgattctg ggtcgcggag aaagagacga tacagatcga gaagcctcaa
      841 gagcaaacga aaagaaaaaa tcaaagagcg aaagaggcct catactgagt ctccaggccg
      901 aaggtcccac caccatagca gcgtcagctc ccacagcccc tcagtgtcct cacactacag
      961 cgattccgga tcacccaaca ggctgagccc caagcatcga gatgacggac ggaagacagg
     1021 cagccagcga tccagcggga gccggtcgct gtccccatcg ggcggcagcg gatgggggtc
     1081 gccccagcag aacggaggca gcaggcagcg aagtggagcg cacgggggcc gccccggctc
     1141 ggcccacagc ccgcccgata agcccagctc gccccgggcc tgcgacaagg cagccgccgc
     1201 gcccacgccg cccgcgcgtg ggaaggacag ccagagtccc cgctccgcgc cgtcgtctca
     1261 gggccgcggg ggccgcgcgg cgggagggac ggccaggcgt cggcgccggc ggaggaggag
     1321 gaggcgatcg cggtcctcgg ccaacgcgcc ccgccgcagg gggcgccggc gtgcaaagcc
     1381 cgcgccgcct cggggctcgt cgcgctcgct cagtggggca cactccagca gcgactccgg
     1441 tggcggcgcc ccgggacccg ggcccgagcc gggctccgag cgaggtcacg gcggacacgg
     1501 aaaacgggca aaggagcgac ccccgcgagc acggcccgca agcacctcgc catcaccagg
     1561 cgcgcatggc cgacggggcg gcccagaggg gaacagttcg tcgcgcagcc cgggccccca
     1621 tcccgggtcg tggagctcca gccgctcgcc ctccaaatcc cgctcgcgct ccccagacaa
     1681 aaggacccgc agccccagcc tctcaccgtc tcccaagaaa cctcttggcc gggacaaaga
     1741 cagcgaaggc cgtgccaggc atgccgaggc tgaggccgcc cgcacccggc gtcgctcccg
     1801 cagctactcg ccgatccgaa agcggcgtcg ggactcgccc agtttcatgg agccgagacg
     1861 catcaccagt gcccgaaagc gtcccatccc ctactaccgg cccagcccct cctcttcctc
     1921 cagctgcttg agcagcgact actccagccg gagccgcagc aggagcccaa gccctgggca
     1981 cagccatgga agctacagca gccgcagtca cgggactcgc agccgttcct gcagcgcctc
     2041 caggagccgc agtcccagct accacagccg gagcagctct gagagtgggg gcttctaagc
     2101 ccagacggac ccatctaggg ctggaaggcc ctggaacaaa gagaggctgg ggccctgaga
     2161 cctgggaaag aggggtctgt acccccatac tgctacggag gtcccggggt gggggtgggg
     2221 cagcaagtgg gcaagtggga ctagagaaga gcttcttcta gagtgggtga cccacccacg
     2281 aggaggaatc acattgtcct gtccctaaag tgtgcccatc cccactccct gcccacccac
     2341 atgcccaggg acaaagagcc tttgcgaaca cagggatcag atcaccatac ccctcttctg
     2401 cttgaggcca gcttaccagc ctggggccca ttgcctgagt atggcacaag agtccactgt
     2461 tggctgtcac ctcacctgag ctcagtggac ccctgcacag cttggaaggt gccaagcctg
     2521 ggaccttccc ctcctcttcc tctatctccc acggggtgga tcggaacaga gcaaagcagc
     2581 cagatctaag agagaaggaa ggaccgccta ggtcctggtg tgttgccagg cagaatgaga
     2641 agctcacact tggcccggtc tctctccctt gccttcatat caaggccaca ctctctgggc
     2701 cttcattagc acaagaggtg gcgtaaatct gtatctaacc ctgaagtcaa aggtaggaga
     2761 gttcaggggc tgaggacgta gctcagttga tagagtgctt gcctagcatg catgaagtcc
     2821 tgggttccat cccaaacaaa gcataaaacc gagcatgcta gtgcatgcct gtaattccag
     2881 cactctggag gtagaggcag gaggaccgga agttcaaggt catcttaggc cacgtagtga
     2941 gttcgaatcc aacctggggt acaggagaac ctgtctcaaa agtgagagac tgggaattca
     3001 ggtcagaaga taagaaagaa cacgggtaga aagcagcagc ggaatttttt tttttttttt
     3061 aagcatgggc ccaaacaatg cagtcagatg accgaacagg tcaagggcta ctgggagaca
     3121 ggtccaggct gctgtctggg ttatgggcca aacgatagct cacggtcaca agctaactaa
     3181 cacgcggtgc acttcggagc ctgcccaagg gatgcctcct tcccaggctt tgacggggca
     3241 ggtttggtgg aggctttcag aactggggtg gtagattcca gccacagccc tcagcctgga
     3301 acatgatgtg aatgaggtgg tcccccctcc agccctcttc tgcggcaccc agccccgccc
     3361 acccccctgc tggggccctc agggatctcg aagtcttcct tggcccaaca ggacagatgc
     3421 cctgggctct ggtgggggga ggagtctggg gtctgatccg gggtcccacc ttctctcagt
     3481 ttccccttcc ctctttctcc gcagtgcggg aaaacatttg gactgtaata aatacactag
     3541 gtgcccggg
//
