LOCUS       NM_001034150            2922 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus SRP receptor subunit alpha (Srpra), mRNA.
ACCESSION   NM_001034150 XM_235989
VERSION     NM_001034150.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Lang,S., Benedix,J., Fedeles,S.V., Schorr,S., Schirra,C.,
            Schauble,N., Jalal,C., Greiner,M., Hassdenteufel,S., Tatzelt,J.,
            Kreutzer,B., Edelmann,L., Krause,E., Rettig,J., Somlo,S.,
            Zimmermann,R. and Dudek,J.
  TITLE     Different effects of Sec61alpha, Sec62 and Sec63 depletion on
            transport of polypeptides into the endoplasmic reticulum of
            mammalian cells
  JOURNAL   J Cell Sci 125 (Pt 8), 1958-1969 (2012)
   PUBMED   22375059
REFERENCE   3  (bases 1 to 2922)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Dec 3, 2020 this sequence version replaced NM_001034150.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.29680.1,
                                           SRR26643287.19800.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-237               JAXUCZ010000008.1  41818199-41818435
            238-321             JAXUCZ010000008.1  41819041-41819124
            322-485             JAXUCZ010000008.1  41819397-41819560
            486-646             JAXUCZ010000008.1  41819895-41820055
            647-803             JAXUCZ010000008.1  41820400-41820556
            804-957             JAXUCZ010000008.1  41820652-41820805
            958-1046            JAXUCZ010000008.1  41821012-41821100
            1047-1165           JAXUCZ010000008.1  41821202-41821320
            1166-1252           JAXUCZ010000008.1  41821458-41821544
            1253-1425           JAXUCZ010000008.1  41821809-41821981
            1426-1639           JAXUCZ010000008.1  41822063-41822276
            1640-1803           JAXUCZ010000008.1  41822703-41822866
            1804-1902           JAXUCZ010000008.1  41822948-41823046
            1903-2922           JAXUCZ010000008.1  41823273-41824292
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q21"
     gene            1..2922
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /note="SRP receptor subunit alpha"
                     /db_xref="GeneID:315548"
                     /db_xref="RGD:1311504"
     exon            1..237
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..2031
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /note="signal recognition particle receptor ('docking
                     protein'); SRP receptor alpha subunit"
                     /codon_start=1
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="NP_001029322.1"
                     /db_xref="GeneID:315548"
                     /db_xref="RGD:1311504"
                     /translation="MLDFFTIFSKGGLVLWCFQGVSDSCTGPVNALIRSVLLQERGGN
                     NSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQS
                     ALSLLNGTFDFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKT
                     KEKAKNNKKKGSKKEGSDGPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQ
                     KHGKGLDKSSKSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSED
                     INLIRGTGPGGQLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSRE
                     DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLV
                     QILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIA
                     ACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFAR
                     NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNR
                     ALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSL
                     NAKAVVAALMKA"
     exon            238..321
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            322..485
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            486..646
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            647..803
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            804..957
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1046
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1047..1165
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1166..1252
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..1425
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1639
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1803
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1804..1902
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
     exon            1903..2922
                     /gene="Srpra"
                     /gene_synonym="Srpr"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accggtttcc gggggctgct ggtgtgacgt gtcccgcgct tggcgcagca ggaagcggcg
       61 gcggacgcgg cccgagttcc cggcgccggt ctcggcccca agtcttctcc cgcttccatc
      121 atgcttgact tcttcaccat cttctcgaag ggcgggcttg tgctctggtg tttccagggc
      181 gtgagcgact cgtgcaccgg gcccgtgaac gcgttgattc gttctgtact gctgcaggaa
      241 cggggaggta acaactcttt cactcatgag gctctcacac tcaagtataa actggacaac
      301 cagtttgaac tggtgtttgt ggttggcttt cagaagatcc tcacactgac ctatgtagac
      361 aaattgatag atgatgtgca ccggctgttc cgggataagt accgcacaga gatccaacaa
      421 cagagtgctt taagtttatt gaatggcact tttgatttcc aaaatgactt cctgcggctc
      481 cttcgtgaag cagaggagag cagtaagatc cgtgctccca ctaccatgaa gaaatttgaa
      541 gattctgaaa aagctaagaa acctgtgaga tccatgattg aaacacgggg ggaaaagacc
      601 aaggaaaaag caaaaaacaa caaaaaaaag gggtccaaaa aggaaggttc tgatggccct
      661 ttggctacca gcaaaacagc ccctgcagaa aagtcaggtc tcccagtggg acctgagaat
      721 ggggaacttt ccaaagagga gctgatacgt aggaagagag aggagttcat tcagaagcat
      781 gggaagggcc tggacaaatc cagtaaatct acaaagtcag atattccaaa ggagaaaggc
      841 aaaaaagcac cccgggtgtg ggaactaggt ggctgtgcta acaaggaagt cttggattac
      901 agtactccca ccaccaatgg aactccagag gcagcccttt ctgaagatat caacttgatt
      961 cgaggaactg ggcctggggg acagcttcaa gatctggatt gcagcagttc agatgatgaa
     1021 ggggctactc aaaacaccaa acctagtgct accaagggaa ctctgggtgg catgtttggg
     1081 atgctgaagg gtctggtggg ttccaagagc ttgagtcgag aagacatgga atctgtgcta
     1141 gacaagatgc gtgatcatct cattgctaag aatgtggctg ctgacattgc tgtccagctc
     1201 tgtgaatctg ttgccaacaa gttagaaggc aaagtgatgg ggacatttag cactgtgact
     1261 tcaacagtga agcaagctct acaagagtct ctggtgcaga tcctgcagcc acagcgtcga
     1321 gtagacatgc tccgggatat catggatgcc caacgtcgcc agcgccctta cgtagttacc
     1381 ttctgtggtg ttaatggagt ggggaagtct actaatcttg ccaagatctc cttctggctt
     1441 ttagagaatg gctttagcgt cctcattgct gcctgcgata catttcgtgc tggggctgtt
     1501 gagcagctcc gcacacacac ccggcgcctg actgcccttc atcccccgga gaagcatggt
     1561 ggccgaacga tggtgcagtt gtttgaaaaa ggctatggca aggacgctgc tggcattgcc
     1621 atggaagcca ttgcctttgc acgtaaccaa ggctttgacg tggtgctggt ggacactgct
     1681 ggccgcatgc aagacaatgc tcctctgatg actgccctgg ccaaactcat tactgtcaat
     1741 acacctgact tggtgctgtt tgtgggggag gccttagtag gcaatgaagc tgtggatcaa
     1801 ctggtcaaat tcaacagagc cttagctgac cattctatgg ctcagacacc tcggctcatt
     1861 gatggcattg ttctaaccaa atttgacacc attgatgaca aggtgggagc tgctatttct
     1921 atgacataca tcacaagcaa acccatcgtc tttgtgggta ctggccagac ctactgtgac
     1981 ctacgcagtc tcaatgccaa ggctgtggtg gctgccctca tgaaggctta atgtggctct
     2041 tgcctaatac caaatcgccg cttgcccaag tccctattcc tgtatcaaga atgtgcttta
     2101 gagtatgtga gcaacttgtc ttcagtgtag tacaaaggca gagtgagggg agctttggag
     2161 acttgcagct ccttctaacc caaccctttg ttcaccccta cctcctgcaa ggagggtcta
     2221 atcatgttac aatcactgcc cagtgacctt ccctcttcct actcaggcat ccccttcact
     2281 ctgcctacag actccatcca tatcacctgt acctggagtg ttgctaacta gtgttgcaga
     2341 gccatggtga gataaggagc agtttgaggt cccagctctg gatcttagtg gcacctatct
     2401 agaatacagc ttctgggtcc ctggtgccag gatgggtcac ctcactgtgg cagtgatggt
     2461 ggcccattct taattgctgc taattataaa tctggtgatg aaaactccac acctgattgt
     2521 tgccccaaag catcagttag gccttgttac aaatgcgagg taagtgccca cttctctcag
     2581 aaacaaaggg agcagagttg ccttccaacc tgtccctgct cccaaaatcc agatggaagc
     2641 tttgcatgtt tgccttcctg ggagaaaacc agttgttaga agtgttactg tccatatccc
     2701 acccaaccca acccttaagc tcctgagcag gtcctggctt ttcctcattc tcttctacag
     2761 tgcctggtag acaagtgcta cgttcaagaa cacaaacctc ttgttaagac ttgtcctgta
     2821 gtttggtatt acagatgtgc tactagtgca ataaggtgaa ggctgtctgc ccagagaaat
     2881 acataattta tataagaaaa taaatttcat aaagaaattg cc
//
