LOCUS       XM_039107233            3751 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRSF protein kinase 2 (Srpk2),
            transcript variant X10, mRNA.
ACCESSION   XM_039107233
VERSION     XM_039107233.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107233.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3751
                     /gene="Srpk2"
                     /note="SRSF protein kinase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 54 ESTs, 9 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 109 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
     CDS             245..2374
                     /gene="Srpk2"
                     /codon_start=1
                     /product="SRSF protein kinase 2 isoform X8"
                     /protein_id="XP_038963161.1"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
                     /translation="MERRAARPAGCWPFRPESGGRKERNIRKKIKQKIELLMSVNSEK
                     SSSSERPEPQQKAPLVPPPPPPPPPPPLPDPVPPEPEEEILGSDDEEQEDPADYCKGG
                     YHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDE
                     IKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQ
                     GLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDGAYVRRMAAEATEWQK
                     AVSTAPQQKPIGKISKNKKKKLKKKQKRQAELLEKRLQEIEELEREAERKILEENTTS
                     AEASSEQDGECQPEVKLKEAELEDTTEEETAKDNGEVEDQEEKEDTEKENTEKDEDDV
                     EQELENIDPTWMESPKANGHIENGLFLLEQQLEDEEDEEDDCANPEEYNLDEPNAESD
                     YTYSSSYEQFNGELPNGQPKSPEFPTPLFSGPLEPVASDSVLSEGSPLTEPEESSPSR
                     DRSRTVSASSTGDLPKTKTRAADLLVNPLDPQNADKIRVKIADLGNACWVHKHFTEDI
                     QTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHII
                     ELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTD
                     FLIPMLEMVPEKRASAGECLRHPWLNS"
ORIGIN      
        1 tgtgtgcatc tttccctcat taaactcgcg aagtaggcaa aggagaggaa atcacttctc
       61 caaggtcaca cagactcaag gacccaggct ccccagctct tggtcttgtg ccctttccac
      121 gcctgccgga gaggaggaag cggcgctcac agggatgcaa ggatgtagag gcacaaaggg
      181 atagaagagg ccgcgttaga gagctggtga gagccccgcc aaggcgctgg ccaaggaagg
      241 acccatggag aggcgtgcag cacgaccagc tgggtgctgg ccattcaggc ccgaaagcgg
      301 aggccgaaaa gagagaaaca tccgaaaaaa aatcaagcag aagattgagc tgctgatgtc
      361 agttaactct gagaagtcgt cctcttcaga aaggccggag cctcaacaga aagctccttt
      421 agttcctcct cctccaccac cgccaccgcc accaccactg ccagaccccg tgcctccaga
      481 gccagaggag gagattctgg ggtcagatga tgaggagcag gaggaccccg cggattactg
      541 caaaggtggc tatcatccag tgaaaatcgg agacctcttc aatggtcgct atcatgtcat
      601 taggaagcta ggatgggggc acttttccac cgtctggcta tgctgggata tgcaagggaa
      661 gaggtttgtc gccatgaaag ttgtaaaaag tgcacagcat tatacagaga cagccttgga
      721 tgaaattaaa ttgctcaaat gtgttcgaga aagtgacccc agtgacccaa acaaagacat
      781 ggtagtccag ctaatcgatg acttcaagat ctcaggcatg aatgggatac atgtctgcat
      841 ggtcttcgaa gtacttggtc accatctcct caaatggatc atcaagtcca actatcaagg
      901 cctcccagtc cgctgtgtga agagtatcat tcgacaggtc cttcagggct tagactatct
      961 acacagcaag tgcaagataa tccacactga tatcaagccg gagaacatcc tgatgtgtgt
     1021 ggacggcgcg tacgtgcgga gaatggcggc cgaggctacg gagtggcaga aagcagtgag
     1081 tacggctcca cagcagaaac ctataggaaa aatatctaaa aacaaaaaga aaaagctaaa
     1141 aaagaaacag aagaggcagg ctgagttgct ggagaagcgc ctgcaggaga ttgaggaatt
     1201 ggagagagaa gccgaaagga aaatcctaga agagaacacc acctctgcag aagcttccag
     1261 tgagcaagat ggagaatgcc agcctgaggt gaaactgaaa gaggccgagt tagaggacac
     1321 aactgaggaa gagacagcaa aggacaatgg tgaagttgaa gaccaggaag agaaagaaga
     1381 cacagagaag gaaaacactg agaaggatga agatgatgtt gaacaggaac ttgagaacat
     1441 agaccctacg tggatggagt cccctaaggc caacggccat attgaaaatg gcctgttttt
     1501 actggagcag cagctggagg atgaagagga tgaggaagat gactgtgcaa accccgagga
     1561 gtataacctg gatgaaccaa atgcggagag tgattatacg tatagcagct cctatgaaca
     1621 attcaatggt gaattgccaa acggacagcc taagagtcca gagtttccca caccgctgtt
     1681 ttctgggccc ttagaacctg tggcctctga ctctgtgctg tcagagggat caccactcac
     1741 cgagccagag gaaagcagtc catcccgtga cagaagcagg acagtttcag cctccagtac
     1801 tggagacttg ccaaaaacaa aaacccgggc agctgacctg ttggtgaacc ctctggatcc
     1861 acagaatgca gataaaatta gagtaaaaat tgctgacctg ggaaatgctt gttgggtgca
     1921 taaacatttc acagaggata tccaaacacg tcagtatagg tccatagagg ttttgatagg
     1981 agcaggctac agtacacctg cagacatttg gagtacagca tgcatggcat ttgagctggc
     2041 aacaggagac tatttgttcg aaccgcattc tggggaagac tattccagag atgaagacca
     2101 catagcccac atcatagagc tgctaggcag tatcccaagg cactttgctc tgtctggaaa
     2161 atactcccgg gagttcttca accgcagagg agaactgcgg cacatcacca agctgaagcc
     2221 ctggagcctc tttgatgttc ttgtggaaaa gtatggctgg ccccatgaag atgctgcaca
     2281 gtttacagat ttcctgatcc caatgttaga gatggttcca gaaaaacgag cctcagctgg
     2341 cgaatgcctt cggcatcctt ggttgaattc ttagcagatt ctacaaatat agcattctga
     2401 gctagcaaat ttttcccagt acattggacc taaacagtgg ctctcattct ttaacaggat
     2461 tacaagtgag cgggctccac ccagaccttt gttttgcttt gaggtactgt tgtttgacac
     2521 ttcgcttcct gtgcaccacg gtcctgggga agggtggtct ttgtcttcag ctaagtagtt
     2581 tactcgccat tttcttctgg aaacaataac atgtctctaa gcattgtttc ttgtgttgtg
     2641 tgacattcaa atgtcatttt ttttttgaac gaaaaatact ttcccctttg tgttttggca
     2701 ggttcgttaa ctatttatga agacacattt tagctgagta ttctataatt tacactctta
     2761 agaaattatc agttggaacc aagaaagagc aagggaatgt acaatgttct cttctggcga
     2821 ggggaagtca gtccccctgt attatatgta tgtaaccatt catctgcaca gatagggcga
     2881 ggagtcccgc gcggaaagcc gcccgccctg agcttcttag cctccactgc atgtttcggg
     2941 tttcccactg cttcaagaag ttgcacaaac ttttcatccc gtagcagtcc gagtggctct
     3001 ggattaggtg ccatgccctc tgtggcccag caagagagaa aaacattaaa attgacacta
     3061 taatctagca gttccatttg tattttgcat atttttaaaa ctatgtttaa aaacatgtga
     3121 tggcccagta ccatctagtg ttgcctcttc ccagcactgt aagttaaatg cgttgtttaa
     3181 attggacaag agaaatatgt tcagtgtgtg gaatgaaaaa aataatatat tttcggaaaa
     3241 gcatgatcag tgtttgttta aaacacaagg tgtgtttcta cagtttgcag cgcagtggac
     3301 agaacacgcc tcacagctta caggtagccg tgatcatgtt cattccaccg gcagctttac
     3361 ttgctactgc ggctcccctt gccttttcat taccgcccat gaatgagaag gtcatttccc
     3421 ctttgcagag cgcatacagt tttagtttat gcatttcctt aaaattaact gtagaatcca
     3481 ggacgcagac attagtaggc aatactattt tagagtgtct cataggaggt gtatttaacc
     3541 tcttttagaa gtcagtggat tgaatgtctt ttttaaaaaa tttttattca ttaaggtgcc
     3601 tcgttttttc ttgactttgt ccattaacat ttatccattt gcctttgcaa taattagatt
     3661 gtgaaaagct aacaagtgtt gtaacaataa tcctttgttt ggggtgcttg cacttgtctt
     3721 aaaaattaaa gtgttttggg gtgtttttcc a
//
