LOCUS       XM_039107230            2289 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRSF protein kinase 2 (Srpk2),
            transcript variant X7, mRNA.
ACCESSION   XM_039107230
VERSION     XM_039107230.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2289
                     /gene="Srpk2"
                     /note="SRSF protein kinase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 3 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 102 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
     CDS             151..2289
                     /gene="Srpk2"
                     /codon_start=1
                     /product="SRSF protein kinase 2 isoform X7"
                     /protein_id="XP_038963158.1"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
                     /translation="MSVNSEKSSSSERPEPQQKAPLVPPPPPPPPPPPLPDPVPPEPE
                     EEILGSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGK
                     RFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHV
                     CMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENI
                     LMCVDGAYVRRMAAEATEWQKAGAPPPSGSAVSTAPQQKPIGKISKNKKKKLKKKQKR
                     QAELLEKRLQEIEELEREAERKILEENTTSAEASSEQDGECQPEVKLKEAELEDTTEE
                     ETAKDNGEVEDQEEKEDTEKENTEKDEDDVEQELENIDPTWMESPKANGHIENGLFLL
                     EQQLEDEEDEEDDCANPEEYNLDEPNAESDYTYSSSYEQFNGELPNGQPKSPEFPTPL
                     FSGPLEPVASDSVLSEGSPLTEPEESSPSRDRSRTVSASSTGDLPKTKTRAADLLVNP
                     LDPQNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACM
                     AFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRDHIA
                     LIIELLGKVPRKYAMLGKYSKEFFTRKGELRHITKLKPWSLFDVLVEKYGWPHEDAAQ
                     FTDFLIPMLEMVPEKRASAGECLRHPWLNS"
ORIGIN      
        1 gcgtcgccgc cgcctctgcc gcggagcccc ccgcccggct gccccgagtc ggaatgagct
       61 ccaggaaagt gctggccatt caggcccgaa agcggaggcc gaaaagagag aaacatccga
      121 aaaaaaatca agcagaagat tgagctgctg atgtcagtta actctgagaa gtcgtcctct
      181 tcagaaaggc cggagcctca acagaaagct cctttagttc ctcctcctcc accaccgcca
      241 ccgccaccac cactgccaga ccccgtgcct ccagagccag aggaggagat tctggggtca
      301 gatgatgagg agcaggagga ccccgcggat tactgcaaag gtggctatca tccagtgaaa
      361 atcggagacc tcttcaatgg tcgctatcat gtcattagga agctaggatg ggggcacttt
      421 tccaccgtct ggctatgctg ggatatgcaa gggaagaggt ttgtcgccat gaaagttgta
      481 aaaagtgcac agcattatac agagacagcc ttggatgaaa ttaaattgct caaatgtgtt
      541 cgagaaagtg accccagtga cccaaacaaa gacatggtag tccagctaat cgatgacttc
      601 aagatctcag gcatgaatgg gatacatgtc tgcatggtct tcgaagtact tggtcaccat
      661 ctcctcaaat ggatcatcaa gtccaactat caaggcctcc cagtccgctg tgtgaagagt
      721 atcattcgac aggtccttca gggcttagac tatctacaca gcaagtgcaa gataatccac
      781 actgatatca agccggagaa catcctgatg tgtgtggacg gcgcgtacgt gcggagaatg
      841 gcggccgagg ctacggagtg gcagaaagca ggtgctcctc ctccttctgg gtctgcagtg
      901 agtacggctc cacagcagaa acctatagga aaaatatcta aaaacaaaaa gaaaaagcta
      961 aaaaagaaac agaagaggca ggctgagttg ctggagaagc gcctgcagga gattgaggaa
     1021 ttggagagag aagccgaaag gaaaatccta gaagagaaca ccacctctgc agaagcttcc
     1081 agtgagcaag atggagaatg ccagcctgag gtgaaactga aagaggccga gttagaggac
     1141 acaactgagg aagagacagc aaaggacaat ggtgaagttg aagaccagga agagaaagaa
     1201 gacacagaga aggaaaacac tgagaaggat gaagatgatg ttgaacagga acttgagaac
     1261 atagacccta cgtggatgga gtcccctaag gccaacggcc atattgaaaa tggcctgttt
     1321 ttactggagc agcagctgga ggatgaagag gatgaggaag atgactgtgc aaaccccgag
     1381 gagtataacc tggatgaacc aaatgcggag agtgattata cgtatagcag ctcctatgaa
     1441 caattcaatg gtgaattgcc aaacggacag cctaagagtc cagagtttcc cacaccgctg
     1501 ttttctgggc ccttagaacc tgtggcctct gactctgtgc tgtcagaggg atcaccactc
     1561 accgagccag aggaaagcag tccatcccgt gacagaagca ggacagtttc agcctccagt
     1621 actggagact tgccaaaaac aaaaacccgg gcagctgacc tgttggtgaa ccctctggat
     1681 ccacagaatg cagataaaat tagagtaaaa attgctgacc tgggaaatgc ttgttgggtg
     1741 cataaacatt tcacagagga tatccaaaca cgtcagtata ggtccataga ggttttgata
     1801 ggagcaggct acagtacacc tgcagacatt tggagtacag catgcatggc atttgagctg
     1861 gcaacaggag actatttgtt cgaaccgcat tctggggaag actattccag agatgaagac
     1921 cacatagccc acatcataga gctgctaggc agtatcccaa ggcactttgc tctgtctgga
     1981 aaatactccc gggagttctt caaccgcaga gatcacatag cattgatcat tgaactgctg
     2041 gggaaagtcc ctcgaaaata cgctatgttg gggaaatatt ccaaggagtt tttcaccaga
     2101 aaaggagaac tgcggcacat caccaagctg aagccctgga gcctctttga tgttcttgtg
     2161 gaaaagtatg gctggcccca tgaagatgct gcacagttta cagatttcct gatcccaatg
     2221 ttagagatgg ttccagaaaa acgagcctca gctggcgaat gccttcggca tccttggttg
     2281 aattcttag
//
