LOCUS       XM_006235903            2133 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRSF protein kinase 2 (Srpk2),
            transcript variant X5, mRNA.
ACCESSION   XM_006235903
VERSION     XM_006235903.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006235903.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006235903.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2133
                     /gene="Srpk2"
                     /note="SRSF protein kinase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 19 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
     CDS             16..2133
                     /gene="Srpk2"
                     /codon_start=1
                     /product="SRSF protein kinase 2 isoform X5"
                     /protein_id="XP_006235965.2"
                     /db_xref="GeneID:296753"
                     /db_xref="RGD:1305107"
                     /translation="MVHACRPEPQQKAPLVPPPPPPPPPPPLPDPVPPEPEEEILGSD
                     DEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV
                     VKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVL
                     GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDGA
                     YVRRMAAEATEWQKAGAPPPSGSAVSTAPQQKPIGKISKNKKKKLKKKQKRQAELLEK
                     RLQEIEELEREAERKILEENTTSAEASSEQDGECQPEVKLKEAELEDTTEEETAKDNG
                     EVEDQEEKEDTEKENTEKDEDDVEQELENIDPTWMESPKANGHIENGLFLLEQQLEDE
                     EDEEDDCANPEEYNLDEPNAESDYTYSSSYEQFNGELPNGQPKSPEFPTPLFSGPLEP
                     VASDSVLSEGSPLTEPEESSPSRDRSRTVSASSTGDLPKTKTRAADLLVNPLDPQNAD
                     KIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATG
                     DYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRDHIALIIELLG
                     KVPRKYAMLGKYSKEFFTRKGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIP
                     MLEMVPEKRASAGECLRHPWLNS"
ORIGIN      
        1 tccctgcatg cagtgatggt tcacgcctgc aggccggagc ctcaacagaa agctccttta
       61 gttcctcctc ctccaccacc gccaccgcca ccaccactgc cagaccccgt gcctccagag
      121 ccagaggagg agattctggg gtcagatgat gaggagcagg aggaccccgc ggattactgc
      181 aaaggtggct atcatccagt gaaaatcgga gacctcttca atggtcgcta tcatgtcatt
      241 aggaagctag gatgggggca cttttccacc gtctggctat gctgggatat gcaagggaag
      301 aggtttgtcg ccatgaaagt tgtaaaaagt gcacagcatt atacagagac agccttggat
      361 gaaattaaat tgctcaaatg tgttcgagaa agtgacccca gtgacccaaa caaagacatg
      421 gtagtccagc taatcgatga cttcaagatc tcaggcatga atgggataca tgtctgcatg
      481 gtcttcgaag tacttggtca ccatctcctc aaatggatca tcaagtccaa ctatcaaggc
      541 ctcccagtcc gctgtgtgaa gagtatcatt cgacaggtcc ttcagggctt agactatcta
      601 cacagcaagt gcaagataat ccacactgat atcaagccgg agaacatcct gatgtgtgtg
      661 gacggcgcgt acgtgcggag aatggcggcc gaggctacgg agtggcagaa agcaggtgct
      721 cctcctcctt ctgggtctgc agtgagtacg gctccacagc agaaacctat aggaaaaata
      781 tctaaaaaca aaaagaaaaa gctaaaaaag aaacagaaga ggcaggctga gttgctggag
      841 aagcgcctgc aggagattga ggaattggag agagaagccg aaaggaaaat cctagaagag
      901 aacaccacct ctgcagaagc ttccagtgag caagatggag aatgccagcc tgaggtgaaa
      961 ctgaaagagg ccgagttaga ggacacaact gaggaagaga cagcaaagga caatggtgaa
     1021 gttgaagacc aggaagagaa agaagacaca gagaaggaaa acactgagaa ggatgaagat
     1081 gatgttgaac aggaacttga gaacatagac cctacgtgga tggagtcccc taaggccaac
     1141 ggccatattg aaaatggcct gtttttactg gagcagcagc tggaggatga agaggatgag
     1201 gaagatgact gtgcaaaccc cgaggagtat aacctggatg aaccaaatgc ggagagtgat
     1261 tatacgtata gcagctccta tgaacaattc aatggtgaat tgccaaacgg acagcctaag
     1321 agtccagagt ttcccacacc gctgttttct gggcccttag aacctgtggc ctctgactct
     1381 gtgctgtcag agggatcacc actcaccgag ccagaggaaa gcagtccatc ccgtgacaga
     1441 agcaggacag tttcagcctc cagtactgga gacttgccaa aaacaaaaac ccgggcagct
     1501 gacctgttgg tgaaccctct ggatccacag aatgcagata aaattagagt aaaaattgct
     1561 gacctgggaa atgcttgttg ggtgcataaa catttcacag aggatatcca aacacgtcag
     1621 tataggtcca tagaggtttt gataggagca ggctacagta cacctgcaga catttggagt
     1681 acagcatgca tggcatttga gctggcaaca ggagactatt tgttcgaacc gcattctggg
     1741 gaagactatt ccagagatga agaccacata gcccacatca tagagctgct aggcagtatc
     1801 ccaaggcact ttgctctgtc tggaaaatac tcccgggagt tcttcaaccg cagagatcac
     1861 atagcattga tcattgaact gctggggaaa gtccctcgaa aatacgctat gttggggaaa
     1921 tattccaagg agtttttcac cagaaaagga gaactgcggc acatcaccaa gctgaagccc
     1981 tggagcctct ttgatgttct tgtggaaaag tatggctggc cccatgaaga tgctgcacag
     2041 tttacagatt tcctgatccc aatgttagag atggttccag aaaaacgagc ctcagctggc
     2101 gaatgccttc ggcatccttg gttgaattct tag
//
