LOCUS       XM_039098820            4018 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRSF protein kinase 1 (Srpk1),
            transcript variant X1, mRNA.
ACCESSION   XM_039098820
VERSION     XM_039098820.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4018
                     /gene="Srpk1"
                     /note="SRSF protein kinase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 63 ESTs, 9 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 88 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361811"
                     /db_xref="RGD:1308272"
     CDS             130..1857
                     /gene="Srpk1"
                     /codon_start=1
                     /product="SRSF protein kinase 1 isoform X1"
                     /protein_id="XP_038954748.1"
                     /db_xref="GeneID:361811"
                     /db_xref="RGD:1308272"
                     /translation="MERKVLALQARKKRTKAKKDKAQRKPETQHRGSAPHSESDIPEQ
                     EEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQG
                     KKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVVQLLDDFKISGVNGTH
                     ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPEN
                     ILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAEESSSIGQDQTLTEHGGEGGAPEINC
                     NGVIGIVNYTANSNNETLRLKEDLHNANDCDGRTLKQEPSFLSSPNGDSSPSPETDSC
                     TPSGSEVPETMACQASVERSLTLTQQDITHLQERIRAHTPSGDEQEREHNGALDSKGK
                     FSAGNFLINPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT
                     PADIWSTACMAFELATGDYLFEPHSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSK
                     EFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAE
                     CLRHPWLNS"
ORIGIN      
        1 ggcgtggctg ggcgggcccg gaggcggggc cggcgcgcgc ggtgagggag agctgggatt
       61 agggccgcgg cgggagcccg agtcggcgtc actcgagtgc gcaggcgcct ggcggttacc
      121 ggtctcgcca tggagcggaa agtgctcgcg ctccaggccc gaaagaaaag gaccaaggcc
      181 aagaaggaca aagcccaaag gaagcctgaa acccagcacc gaggctctgc accccactcc
      241 gagagcgaca tccccgagca ggaggaggag attctggggt ctgatgatga tgaacaggaa
      301 gaccctaacg actactgtaa aggaggttat catcttgtga aaattggaga tctatttaac
      361 gggcgatacc atgtgattcg aaaattaggc tggggacact tttccacagt atggttatca
      421 tgggatattc agggaaagaa gtttgtagca atgaaagtag ttaaaagtgc cgaacattac
      481 acagagacag cactggatga gatccggctc ctgaaatcgg ttcgcaattc agacccgaat
      541 gatccaaatg gagaaatggt cgttcaacta ctagatgact ttaaaatatc aggcgttaat
      601 ggaacacata tctgcatggt gtttgaagtt ttaggacatc atctactcaa gtggatcatc
      661 aagtccaact atcaggggct tccgctgcct tgtgtcaaaa aaattattca gcaagtgctc
      721 cagggtctgg attacttaca caccaagtgc cggatcatcc acactgacat caagccggaa
      781 aacatcctgt tgtccgtgaa cgagcagtac attcggaggc tggctgcaga ggccacagag
      841 tggcaacggt ctggagctcc cccaccatcg gggtctgcag aagagtcgag ttccattggc
      901 caggatcaga cactcacgga gcatggtgga gagggtggtg cgccagaaat taattgcaat
      961 ggagtgattg gaatcgttaa ttacactgca aacagtaaca atgaaacctt gaggcttaaa
     1021 gaggacctac ataatgccaa tgactgtgat ggccgcactc tgaagcagga acctagcttc
     1081 ctaagctctc caaatggaga cagtagtccg tctccagaaa cagactcttg cacaccttcg
     1141 ggctcggagg tgcccgagac catggcgtgc caggcctctg tagagcggtc actcaccctc
     1201 acccaacagg acatcaccca cctgcaggag cgcatccggg cacatacgcc ttctggggat
     1261 gagcaggagc gggaacacaa tggagcgctg gacagcaaag gaaaattctc tgctggaaat
     1321 tttcttatta atcccctgga gccaaaaaat gcagaaaagc tcaaagtgaa gattgctgat
     1381 cttgggaatg cctgctgggt gcacaagcat ttcaccgaag acatccagac ccggcagtac
     1441 cggtctttgg aggtcctgat aggatctggc tacaacaccc ctgctgacat ctggagcaca
     1501 gcatgcatgg cctttgaact agccacaggg gactatctgt ttgagcctca ttcgggggag
     1561 gattacacgc gagatgaaga ccacatcgcc ctgatcatag agctcctggg gaaggtgcct
     1621 cgcaagctca ttgtagcagg gaaatactcc aaggaatttt tcaccaaaaa aggtgacctg
     1681 aaacacatca ccaagttgaa gccttggggt cttctggagg ttctggtgga gaagtatgag
     1741 tggcctcagg aggaggctgc tggcttcaca gatttcctgc tgcccatgtt ggagctcatg
     1801 cctgagaaga gagccactgc cgctgagtgt ctccggcatc cttggctgaa ctcctaagcc
     1861 agccctgccc gcccgccact gcagcaggct catcagactg accctccctc cggccctccc
     1921 ctctgaggct tccctctctt ttttccaggg caaagctctt tctttcaagg gtttctattt
     1981 tttttaatcc aacatgttca tttgggtttg cttccttgat cctgtgggaa tcccacagcc
     2041 attgggcatc ctaggtgaat ttggccttgg ttgggctctg ccaaagacta aaagtgtgaa
     2101 cagcctcacc ctctgcccgc cattgtcatt gtcattgtcg tccgtgccct ttctcagaag
     2161 agccgtgaag atctgagccc acccttctta tccactgact ccaagagtca cattttctag
     2221 tgcatatccc gctgccagca ccaggttgag gaggggaggg tgtgggttct gtgaacagca
     2281 gagacattaa atgcgctgta tccaggctgc atcatcttcc tggattcttt gtgttttcta
     2341 tgttcacatt tttttcctgc gacttttacg ctacgttttt cggtgagcaa ccagtttggg
     2401 tgccatttta tcactgttca aagcgctgtt cgagcccctc atcttctcac aaccaagttc
     2461 ctggaatctt gagtctgatt tttaatgtaa acgaaacaga accagtgaat tacagttcct
     2521 gggagcctca ggtgttgtga agtcgtcctt tctgtgtcct gtgttgccct aagaaccctc
     2581 tcttgagtcc gctcctcccg cttggggcct tcctcagctt gagtggacgt ggactgtctt
     2641 gtaacgagct ttggggtgat ccagacagga gatgtgggtt tcagggctgt ctgtccggtt
     2701 cagggagtgt ccctacattc caaatccttc ccagatggct ctctgcttcc acccccagcc
     2761 cgcccgccca cctgcctgcc cgcctgcctg ccttgcctag agttctggcc ttgactcagt
     2821 ttctccatgt ggctttgctg ttctcacttc tcagaggctc ggggtctttg atgagaccct
     2881 ggatgaggaa ccaagggagg agaggatggc acttttctca ttcttcccgt tggttttgac
     2941 attagtcacc ctatgctgct atttccttgt ataatgtaag tttttttttt ttttttttta
     3001 acatcaattt tgagatgatt gaaatgtact tgaggctttt tcttaatgca aaaaggcttt
     3061 gtgaactttg ttttaggccc ggcccctcat agacttgatt acctaaatct tacatgttcc
     3121 tggggtgaag cccacatcag aagaaaggcg ggattggggt cacatgacag ctgcttgcaa
     3181 attttagcag ggaccaagtg ggtcttgatt acagcactct ggaaacagct cagtctctaa
     3241 cttggagaaa gccaaggagt tgcaagccaa ggctttcctg agcaagctga atgagaccca
     3301 ccactgcctc cttcctgtgt ggaagactgg ggagtcaccc tcgtgactgg ctcaccagca
     3361 agcagctgcc tgtaactcac caacttcacc tgaggagctg gccagccatt cattggctct
     3421 ggattggttg tttggaagca gacatgttcc tgtagagagc tttaggtcag gctatctgtg
     3481 tacctatcaa gaacagagag cagatgacat cacacaacgg cagggaaatc ctacagcagt
     3541 tccaatccac tcggggttgt caactgtgct gacatctaaa gcaatagcag acctgaaact
     3601 gcgtctcagc aaatctcagt tgtgggatta taggaatcct agtgacatta aggtgaccta
     3661 accaagaaac acaagccaac agcaggcctg ttttaatcat tgactccatg ggaaatttta
     3721 atggggggag accctggaac ttcattccgg aaataagtcc caccaaataa gggctttccc
     3781 cctgctgctt aagtgaggag cagagaacct gggtgagggg aaggaggcag gggcagaagc
     3841 tgccctcccg tggctcctga gctaggctga acagcagatg ccatggaggc caggtctgct
     3901 gcaggactgc tgttggctcc tgggtacagg tacagtcctg atgtgtttta tattctttct
     3961 actgagtgcg atgtttgtgt cctcacaagc cgatcaataa acagagtatt taataaca
//
