LOCUS       NM_001008373            2355 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus SREK1-interacting protein 1 (Srek1ip1), mRNA.
ACCESSION   NM_001008373 XM_342186
VERSION     NM_001008373.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Heese,K., Fujita,M., Akatsu,H., Yamamoto,T., Kosaka,K., Nagai,Y.
            and Sawada,T.
  TITLE     The splicing regulatory protein p18SRP is down-regulated in
            Alzheimer's disease brain
  JOURNAL   J Mol Neurosci 24 (2), 269-276 (2004)
   PUBMED   15456940
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 15, 2022 this sequence version replaced NM_001008373.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086553.1, AY236996.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-178               JAXUCZ010000002.1  37709737-37709914
            179-226             JAXUCZ010000002.1  37719427-37719474
            227-370             JAXUCZ010000002.1  37727119-37727262
            371-443             JAXUCZ010000002.1  37728616-37728688
            444-2355            JAXUCZ010000002.1  37731480-37733391
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q13"
     gene            1..2355
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /note="SREK1-interacting protein 1"
                     /db_xref="GeneID:361888"
                     /db_xref="RGD:1305356"
     exon            1..178
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..627
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /note="protein SFRS12IP1; splicing regulatory
                     glutamine/lysine-rich protein 1 interacting protein 1;
                     SFRS12-interacting protein 1"
                     /codon_start=1
                     /product="protein SREK1IP1"
                     /protein_id="NP_001008374.1"
                     /db_xref="GeneID:361888"
                     /db_xref="RGD:1305356"
                     /translation="MAVPGCNKDNVRAGCRKCGYPGHLTFECRNFLRVDPKRDIVLDV
                     SSTSSEDSDEESEELNKLQALQEKRINEEEEKKKEKSREKIKLKKKRKRSNSSTTEED
                     SSKQKKQKYQKKEKKKEKKNKSKKGKHHKKEKKKRKKEKRSSPNRSEVTKK"
     exon            179..226
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            227..370
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            371..443
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            444..2355
                     /gene="Srek1ip1"
                     /gene_synonym="P18srp; RGD1305356; Sfrs12ip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttagttccg ccaaccctgg atgtgcatcc ggccttctcc tgccctgtga agttgtagtg
       61 accgggtggg agagatccct ctgctagtgc gttgtcctcg ctaaggacct gaacgaaacg
      121 cgatctcgaa agctcaggac tccggtgacc ccactcacct gcattatggc agtcccaggt
      181 tgcaacaagg acaatgtccg agcaggctgc agaaaatgtg gctaccctgg tcatctgact
      241 tttgagtgcc gcaattttct tcgggtagac cccaaaaggg acattgtgtt ggacgtcagc
      301 agcacaagca gtgaggacag tgacgaagaa agcgaggagc tgaacaagct tcaggctctg
      361 caggagaaaa gaataaatga agaagaagag aagaaaaagg aaaaaagcag ggagaaaatt
      421 aaattgaaaa aaaagaggaa aaggtctaac tccagcacca ctgaagagga ctcttcaaaa
      481 caaaagaaac agaagtatca gaaaaaagaa aagaaaaagg aaaaaaagaa caaatccaaa
      541 aaaggaaaac atcacaaaaa ggaaaaaaag aagagaaaaa aggaaaagcg ttcttcccct
      601 aaccgttctg aagtcaccaa aaagtaacag agtcttgggc ctaactcagg aaattgaaga
      661 attcagtttt tttaagtatt gaaccttcct tggaattgct atataattac gctttgcaga
      721 aaaatcccag cctcttccat aaagacgttt ttcacctcct ggggcccttc cctccctgcc
      781 cgtctgtatt aaacccatct ccttacttga cagcttgtcc caagtctaga tgtgtgcact
      841 cacagcacat cactttggct gtttgtgtct cggtgtctag ctgtctcggt aagttaatta
      901 gcacgaggct ttcctgcgat caaaggagta atctacatgg cagctcctga gtcttgtctg
      961 ccttccagtg gtaaagctgc ctcggcggta gtgattcgct cttgatactg aatagcttta
     1021 tgtactctgt aatgtatgga atagtgaagc tcttcactat tgttttaaac ctctagactt
     1081 tttaaataac atcactgagg ataaaaccac tttactgatc ttaaatagta agtttttaaa
     1141 tgagtgggat ctacagaaga taataatgaa agtatttata acagtgtcat tgttttatga
     1201 aatgcttgtt tctggcactt gcctcccatg attttacaac aattaaaaca gccctgtttt
     1261 taaaacaatc atctagctta ctagaaagtc tggcagggag attctgtgct ggtccagact
     1321 attagggtag atgctgggtt gatctacaaa tgggccacat tggcatatct taggcgatac
     1381 ctcaaacaca gggctctctg tgtggtaaca gcaaagtcct cattacaact gatttctact
     1441 atgtccagtg tatgcaatac ttgcatatat gtgtattatg gcagttttta atgaatgttt
     1501 gcatatatat ttattttttc tgaaagggtt ttagagtgag tttcacactg aacttctggc
     1561 ttcgtggata atcaatgttg atattttctc tttcacttca gtcacagatc ttagtagcac
     1621 tgtgagaatt tttaaactaa gattttcatc ccgtactttt taaaattgaa gacttggagg
     1681 tagcaccatg aaagcctttg tatagtaatg aagtttgtat ataaataaga atgttcagtg
     1741 acatgttagc ggatttaagt gtttcttaca tttttaactt catggtcatc agtgtagttt
     1801 aacatctagt attccctaat gccagcatgt taacttactg tgccataaaa gcattgaaaa
     1861 ccaacctgtt atcataggac agctccagag tttctgagtg ccttgttatg ctgcacttaa
     1921 tacatcttcc gattggtaag tacacttgtg ctgggcaaat ttatggccat aaaatcagat
     1981 acatacacgt ggccttgcag gccgagagct ttaccaattt tccccttacc cagcacccaa
     2041 actgacattt cctgattgcc tcagggacgc ctgggaagtc ccctaacacc ctcgtctctc
     2101 tctgctcagg ttgcagagaa gctgcagcac agccttccac acaccgctcc ctcacactga
     2161 cgtacgtgca gcttccgctc ttccacaaac tggctactct cccagcccat agaaacgtaa
     2221 tcttgtttag agtgttatca gttgtttgaa ctaaagcaca gaactttgag atttttaagg
     2281 aattgttttg tctatgctta ctttgtggaa gttcagttat ctgaattaat aaaatattat
     2341 ttggattaat aaaaa
//
