LOCUS       XM_039105966            3916 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRC proto-oncogene, non-receptor
            tyrosine kinase (Src), transcript variant X14, mRNA.
ACCESSION   XM_039105966
VERSION     XM_039105966.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105966.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3916
                     /gene="Src"
                     /note="SRC proto-oncogene, non-receptor tyrosine kinase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 47 ESTs, 4 long SRA reads, 51
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 213 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:83805"
                     /db_xref="RGD:620795"
     CDS             428..2038
                     /gene="Src"
                     /codon_start=1
                     /product="proto-oncogene tyrosine-protein kinase Src
                     isoform X2"
                     /protein_id="XP_038961894.1"
                     /db_xref="GeneID:83805"
                     /db_xref="RGD:620795"
                     /translation="MGSNKSKPKDASQRRRSLEPAENVHGAGGAFPASQTPSKPASAD
                     GHRGPNAAFVPPAAAEPKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETD
                     LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRE
                     SERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIT
                     SRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKL
                     GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE
                     EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA
                     ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS
                     FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEE
                     RPTFEYLQAFLEDYFTSTEPQYQPGENL"
ORIGIN      
        1 gccaccgccg ccgccgcctc ctccctttct ctcggtctgt ctctcccggc ccggaatcca
       61 gccggccgcc ccgccggagc ggccaggccg ccgcccgcca gcgccgcgcg ccccgctggg
      121 gtccgcccgg gcgcgtccgg agctcgcggt cgccgcgcag gacagaatac agaggccaag
      181 agtgctgagt gacctgtgta accatgacag gccgagccgg gatctgaaca aaggcagagt
      241 ctctgcagat gcagatgcag atgttgagac ccagagaagg ggagctgctc gcctagggat
      301 acgtagcagg agaggaggag cagggccttt aagccaagac ccggacacta cggctggtgt
      361 ctgtgccaag cccccagact gctcccctga tccactgggg tagccctgct acctaccagc
      421 caggaccatg ggcagcaaca agagcaagcc caaggacgcc agccagaggc gccgcagcct
      481 ggagcccgcg gagaacgtgc atggggcagg tggcgccttc cctgcctcac agacaccaag
      541 caagcctgcc tccgccgatg gccaccgcgg gcccaatgcc gcctttgtgc cccccgcggc
      601 cgccgagccc aagctcttcg gaggcttcaa ctcctcggac actgtcacct ccccacaaag
      661 ggcggggcct ctggcaggtg gggtgactac ctttgtggcc ctctatgact atgagtcacg
      721 gacagagact gacctgtcct tcaagaaagg ggagcggctg cagattgtca ataacacaga
      781 gggagactgg tggctggcac actcgctgag caccggacag accggttaca tccccagtaa
      841 ctatgtggcg ccctccgact ccatccaggc tgaggagtgg tactttggca agatcactag
      901 acgggaatca gagcggctac ttctcaacgc cgagaacccc agagggacct tcctcgtgag
      961 ggagagtgag accacaaaag gtgcctactg cctctctgta tccgactttg acaatgccaa
     1021 gggcctaaat gtgaaacact acaagatccg gaaactggac agtggcggat tctacatcac
     1081 ctcccgcacg caattcaaca gcctgcagca gcttgtggct tactactcca aacatgctga
     1141 tggcctgtgt caccgtctca ctaccgtgtg tcccacatcc aagcctcaga cccagggcct
     1201 ggccaaggat gcgtgggaga tcccccggga gtccctgcgg ctggaggtca agctgggcca
     1261 gggttgcttc ggagaggtgt ggatggggac ctggaacggc accacgaggg ttgccatcaa
     1321 aaccctgaag ccaggcacca tgtctccaga ggccttcctg caggaggccc aagtcatgaa
     1381 gaaactgagg catgagaagc tggtgcagct gtatgccgtg gtgtcagaag aacccattta
     1441 cattgtgaca gagtacatga acaaggggag tctgctggac tttctcaagg gggaaacggg
     1501 caaatacttg cggctacccc agctggtgga catgtctgct cagattgctt caggcatggc
     1561 ctatgtggag cggatgaact atgtgcaccg ggacctccga gccgccaata tcctggttgg
     1621 cgagaacctg gtgtgcaaag tggccgactt tgggctggcc cggctcatag aggacaacga
     1681 atacacagct cggcaaggtg ccaaattccc catcaagtgg accgcccctg aagcggctct
     1741 gtatggcagg ttcaccatca agtcggacgt gtggtccttt ggaatcctgc tgactgagct
     1801 caccactaag ggcagagtgc cctatcctgg gatggtgaac cgagaggtgc tggaccaggt
     1861 agagcggggc taccggatgc cttgtccccc cgagtgccct gagtccctgc atgacctcat
     1921 gtgccagtgc tggcggaagg agcctgagga gcggcccacc ttcgagtacc tgcaggcctt
     1981 cctggaggac tactttacgt ccacggagcc gcagtaccag cccggggaga acctatagga
     2041 actgtgtgca cagaactgtc acctctaggc ttttgggtgt cgcctccctt catcctctct
     2101 ctggggctga gttcctctgc aatgcccctt ttggagcatg gaagggcttc agggacgggg
     2161 cagcctggaa ggacaggttg aggctggtac agcgactgtc ccacgcctgc catggccaca
     2221 ggctctctgt gcattctctc tggagtcggc ctgcttcata ctgggtgacg agccgagctg
     2281 ggggcggttt tccaacctca acccactcta cccacctggc tcctccccac tttctaaacc
     2341 ctgggtctgt ttcaagctgg ccaaagagcc tttccaaaga ggaataaggc ccagcccttg
     2401 gcctatatgt actaactgcc cctggtcatc cttgttggag gcttctgggt ggaacattgg
     2461 gtctagaacc ctctcccatg gctctcaggc tagacagccc aagacccaac accagttggg
     2521 ataagtgtca gagtgagcac tccctcagcc ctgtcctcac caaggaccct tgagatcacc
     2581 aacacattac cctcatttct ctgttggaaa aactgaatcc aggaggggct gggacctgtc
     2641 caagaccacg ggcagtttcg ggttgaggtg ggcttggcac ctggtgctcc ctctgtcttc
     2701 ctcaggaact aacgagagct gtcctccaag ggagtgggca ggctgaggcc cgagagtggc
     2761 ttcaagttgt cagggttctg ctctcactga tgctcatggg tctatcatgg gggaagaggc
     2821 aagcaggagg ctgagcccgg cgtgaggggt aggaaatgac ggtgtggaag aggtgcgtca
     2881 caatgcagct gggctttgac cttaagagct ggccgtgaag tggagtgagc gctcaggctg
     2941 cagaggcagt caggtagaag aggaagaact aagaagtgag gagccccgct cctcaatttg
     3001 tcctgatcat ttcaacaccc tgcgcatgct cttctgccta tgctgggatt ccctaactca
     3061 cagggaggga ggggagctcc ccggctgggg aaaggaggga gacgatcctt actgctatgc
     3121 accaacactg accctgccct ctctaagcta aactctctgc ccctgtgact ctggcttctg
     3181 ccattgctca gcccctttat agatagatcc acagctgggt gaccaagggg agcacggccc
     3241 tggaacagca gacagctgac tgcttggtcc ctggctcttc tgcctagcct taggatatgt
     3301 ggtagcttct ctctgcctca gtgtccctat ctgtaaggtg ggcagttggt gatttgtggc
     3361 atttcaacca aggacccctg tgtgtgtgtg tctgtgtgtg tctgtgtgtg tgtgtacaca
     3421 tgtgcctgtg tcttcccttg tgtccatatt taacgtgtaa aaacatccct actctgtccc
     3481 cagacatggc catttcacaa ttaccccatc acagcaataa tgtccccagc gccggggatc
     3541 cgagccagcc aggccctgct tgcagggaag gatgccaagc agggcctgcc ctgacatttc
     3601 cacttcactc ccatggtctc ctgcccaagt ctccccatgc acctggcgag tctaagcttg
     3661 ccacccaatt ctccctaccc aactccaact gcccaaggac ctttgtgtaa ggtggcctca
     3721 gcggtccggt tttctccttt tctttctttt taacagtgtt ttgtagattt cggatgacta
     3781 tgcagaggcc ttggggaccc ccagctctcg gcagggcctg gggatcccac attccatggc
     3841 ccaggtgtgg gggagggtta cccagactgg ttgtacatac tctgcatact gtctgattaa
     3901 acacgaacag acctca
//
