LOCUS       XM_039105961            3811 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SRC proto-oncogene, non-receptor
            tyrosine kinase (Src), transcript variant X8, mRNA.
ACCESSION   XM_039105961
VERSION     XM_039105961.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105961.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3811
                     /gene="Src"
                     /note="SRC proto-oncogene, non-receptor tyrosine kinase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 48 ESTs, 4 long SRA reads, 17
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 88 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:83805"
                     /db_xref="RGD:620795"
     CDS             305..1933
                     /gene="Src"
                     /codon_start=1
                     /product="proto-oncogene tyrosine-protein kinase Src
                     isoform X1"
                     /protein_id="XP_038961889.1"
                     /db_xref="GeneID:83805"
                     /db_xref="RGD:620795"
                     /translation="MGSNKSKPKDASQRRRSLEPAENVHGAGGAFPASQTPSKPASAD
                     GHRGPNAAFVPPAAAEPKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETD
                     LSFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFG
                     KITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDS
                     GGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESL
                     RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL
                     YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV
                     HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI
                     KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW
                     RKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL"
ORIGIN      
        1 gggtccgccc gggcgcgtcc ggagctcgcg gtcgccgcgc agaatacaga ggccaagagt
       61 gctgagtgac ctgtgtaacc atgacaggcc gagccgggat ctgaacaaag gcagagtctc
      121 tgcagatgca gatgcagatg ttgagaccca gagaagggga gctgctcgcc tagggatacg
      181 tagcaggaga ggaggagcag ggcctttaag ccaagacccg gacactacgg ctggtgtctg
      241 tgccaagccc ccagactgct cccctgatcc actggggtag ccctgctacc taccagccag
      301 gaccatgggc agcaacaaga gcaagcccaa ggacgccagc cagaggcgcc gcagcctgga
      361 gcccgcggag aacgtgcatg gggcaggtgg cgccttccct gcctcacaga caccaagcaa
      421 gcctgcctcc gccgatggcc accgcgggcc caatgccgcc tttgtgcccc ccgcggccgc
      481 cgagcccaag ctcttcggag gcttcaactc ctcggacact gtcacctccc cacaaagggc
      541 ggggcctctg gcaggtgggg tgactacctt tgtggccctc tatgactatg agtcacggac
      601 agagactgac ctgtccttca agaaagggga gcggctgcag attgtcaata acacgaggaa
      661 ggtggatgtc agagagggag actggtggct ggcacactcg ctgagcaccg gacagaccgg
      721 ttacatcccc agtaactatg tggcgccctc cgactccatc caggctgagg agtggtactt
      781 tggcaagatc actagacggg aatcagagcg gctacttctc aacgccgaga accccagagg
      841 gaccttcctc gtgagggaga gtgagaccac aaaaggtgcc tactgcctct ctgtatccga
      901 ctttgacaat gccaagggcc taaatgtgaa acactacaag atccggaaac tggacagtgg
      961 cggattctac atcacctccc gcacgcaatt caacagcctg cagcagcttg tggcttacta
     1021 ctccaaacat gctgatggcc tgtgtcaccg tctcactacc gtgtgtccca catccaagcc
     1081 tcagacccag ggcctggcca aggatgcgtg ggagatcccc cgggagtccc tgcggctgga
     1141 ggtcaagctg ggccagggtt gcttcggaga ggtgtggatg gggacctgga acggcaccac
     1201 gagggttgcc atcaaaaccc tgaagccagg caccatgtct ccagaggcct tcctgcagga
     1261 ggcccaagtc atgaagaaac tgaggcatga gaagctggtg cagctgtatg ccgtggtgtc
     1321 agaagaaccc atttacattg tgacagagta catgaacaag gggagtctgc tggactttct
     1381 caagggggaa acgggcaaat acttgcggct accccagctg gtggacatgt ctgctcagat
     1441 tgcttcaggc atggcctatg tggagcggat gaactatgtg caccgggacc tccgagccgc
     1501 caatatcctg gttggcgaga acctggtgtg caaagtggcc gactttgggc tggcccggct
     1561 catagaggac aacgaataca cagctcggca aggtgccaaa ttccccatca agtggaccgc
     1621 ccctgaagcg gctctgtatg gcaggttcac catcaagtcg gacgtgtggt cctttggaat
     1681 cctgctgact gagctcacca ctaagggcag agtgccctat cctgggatgg tgaaccgaga
     1741 ggtgctggac caggtagagc ggggctaccg gatgccttgt ccccccgagt gccctgagtc
     1801 cctgcatgac ctcatgtgcc agtgctggcg gaaggagcct gaggagcggc ccaccttcga
     1861 gtacctgcag gccttcctgg aggactactt tacgtccacg gagccgcagt accagcccgg
     1921 ggagaaccta taggaactgt gtgcacagaa ctgtcacctc taggcttttg ggtgtcgcct
     1981 cccttcatcc tctctctggg gctgagttcc tctgcaatgc cccttttgga gcatggaagg
     2041 gcttcaggga cggggcagcc tggaaggaca ggttgaggct ggtacagcga ctgtcccacg
     2101 cctgccatgg ccacaggctc tctgtgcatt ctctctggag tcggcctgct tcatactggg
     2161 tgacgagccg agctgggggc ggttttccaa cctcaaccca ctctacccac ctggctcctc
     2221 cccactttct aaaccctggg tctgtttcaa gctggccaaa gagcctttcc aaagaggaat
     2281 aaggcccagc ccttggccta tatgtactaa ctgcccctgg tcatccttgt tggaggcttc
     2341 tgggtggaac attgggtcta gaaccctctc ccatggctct caggctagac agcccaagac
     2401 ccaacaccag ttgggataag tgtcagagtg agcactccct cagccctgtc ctcaccaagg
     2461 acccttgaga tcaccaacac attaccctca tttctctgtt ggaaaaactg aatccaggag
     2521 gggctgggac ctgtccaaga ccacgggcag tttcgggttg aggtgggctt ggcacctggt
     2581 gctccctctg tcttcctcag gaactaacga gagctgtcct ccaagggagt gggcaggctg
     2641 aggcccgaga gtggcttcaa gttgtcaggg ttctgctctc actgatgctc atgggtctat
     2701 catgggggaa gaggcaagca ggaggctgag cccggcgtga ggggtaggaa atgacggtgt
     2761 ggaagaggtg cgtcacaatg cagctgggct ttgaccttaa gagctggccg tgaagtggag
     2821 tgagcgctca ggctgcagag gcagtcaggt agaagaggaa gaactaagaa gtgaggagcc
     2881 ccgctcctca atttgtcctg atcatttcaa caccctgcgc atgctcttct gcctatgctg
     2941 ggattcccta actcacaggg agggagggga gctccccggc tggggaaagg agggagacga
     3001 tccttactgc tatgcaccaa cactgaccct gccctctcta agctaaactc tctgcccctg
     3061 tgactctggc ttctgccatt gctcagcccc tttatagata gatccacagc tgggtgacca
     3121 aggggagcac ggccctggaa cagcagacag ctgactgctt ggtccctggc tcttctgcct
     3181 agccttagga tatgtggtag cttctctctg cctcagtgtc cctatctgta aggtgggcag
     3241 ttggtgattt gtggcatttc aaccaaggac ccctgtgtgt gtgtgtctgt gtgtgtctgt
     3301 gtgtgtgtgt acacatgtgc ctgtgtcttc ccttgtgtcc atatttaacg tgtaaaaaca
     3361 tccctactct gtccccagac atggccattt cacaattacc ccatcacagc aataatgtcc
     3421 ccagcgccgg ggatccgagc cagccaggcc ctgcttgcag ggaaggatgc caagcagggc
     3481 ctgccctgac atttccactt cactcccatg gtctcctgcc caagtctccc catgcacctg
     3541 gcgagtctaa gcttgccacc caattctccc tacccaactc caactgccca aggacctttg
     3601 tgtaaggtgg cctcagcggt ccggttttct ccttttcttt ctttttaaca gtgttttgta
     3661 gatttcggat gactatgcag aggccttggg gacccccagc tctcggcagg gcctggggat
     3721 cccacattcc atggcccagg tgtgggggag ggttacccag actggttgta catactctgc
     3781 atactgtctg attaaacacg aacagacctc a
//
