LOCUS       NM_001047743            1276 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus serine palmitoyltransferase, small subunit A
            (Sptssa), mRNA.
ACCESSION   NM_001047743 XM_001078955 XM_580102
VERSION     NM_001047743.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Siow,D., Sunkara,M., Dunn,T.M., Morris,A.J. and Wattenberg,B.
  TITLE     ORMDL/serine palmitoyltransferase stoichiometry determines effects
            of ORMDL3 expression on sphingolipid biosynthesis
  JOURNAL   J Lipid Res 56 (4), 898-908 (2015)
   PUBMED   25691431
REFERENCE   2  (bases 1 to 1276)
  AUTHORS   Hirata,Y., Yamamori,N., Kono,N., Lee,H.C., Inoue,T. and Arai,H.
  TITLE     Identification of small subunit of serine palmitoyltransferase a as
            a lysophosphatidylinositol acyltransferase 1-interacting protein
  JOURNAL   Genes Cells 18 (5), 397-409 (2013)
   PUBMED   23510452
REFERENCE   3  (bases 1 to 1276)
  AUTHORS   Han,G., Gupta,S.D., Gable,K., Niranjanakumari,S., Moitra,P.,
            Eichler,F., Brown,R.H. Jr., Harmon,J.M. and Dunn,T.M.
  TITLE     Identification of small subunits of mammalian serine
            palmitoyltransferase that confer distinct acyl-CoA substrate
            specificities
  JOURNAL   Proc Natl Acad Sci U S A 106 (20), 8186-8191 (2009)
   PUBMED   19416851
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2009 Jun 16;106(24):9931]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098829.1.
            
            On or before Sep 8, 2006 this sequence version replaced
            XM_580102.2, XM_001078955.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098829.1, FQ209541.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00155333, SAMEA5756307
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..1276
                     /gene="Sptssa"
                     /gene_synonym="Ssspta"
                     /note="serine palmitoyltransferase, small subunit A"
                     /db_xref="GeneID:500651"
                     /db_xref="RGD:1565821"
     exon            1..124
                     /gene="Sptssa"
                     /gene_synonym="Ssspta"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..228
                     /gene="Sptssa"
                     /gene_synonym="Ssspta"
                     /note="small subunit of serine palmitoyltransferase A"
                     /codon_start=1
                     /product="serine palmitoyltransferase small subunit A"
                     /protein_id="NP_001041208.1"
                     /db_xref="GeneID:500651"
                     /db_xref="RGD:1565821"
                     /translation="MAGMALARAWKQMSWFYYQYLLVTALYMLEPWERTVFNSMLVSV
                     VGMALYTGYVFMPQHIMAILHYFEIVQ"
     exon            125..1255
                     /gene="Sptssa"
                     /gene_synonym="Ssspta"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgggaggc gcatggcggg catggcgttg gcgcgagcat ggaagcagat gtcctggttc
       61 tactaccagt acttgctggt cactgcgctc tacatgctgg agccctggga gcgaaccgtg
      121 ttcaattcga tgctggtttc tgtggtgggg atggcactgt acaccggcta cgtcttcatg
      181 ccccagcaca tcatggcaat actgcattac tttgaaattg tacagtgacg gagatgtgac
      241 caggatccag aggctcctgg ggaagatcca ccttgtgaag ttgggacgag acctcgtcac
      301 atgtgagatg ctctacggat gtcaacataa ccaaccttat aaatacagag actaaacttc
      361 atgagtagaa caggagaaat catcctgact catgtgttgt gttccttcct tttgatttta
      421 aaagaggctc ttacatagta gcttttatct attttaacat tgtagtcatt tgtactttga
      481 tatcagtatt ttcttaacct ttgtgactgt ttcaatatta cccagtgaaa gcttttctta
      541 atgtaacttt gagtacatct taactgcctt ctatttttaa aacctaaggt cgttagttgg
      601 gctttactgt tcttgctatc gtatggcata cacatctgcc tggatatatt tctactcgac
      661 caaagttttg taagaaacaa tacagaattt ggggatggga gggaggatat tttgagaagt
      721 acttacaaaa gatttatctg taagcttgac ctcaggggta cggttttagc tccctagact
      781 ctttaacagc ttttgctcta aaactattaa agtgtttctt agtgatgaaa aagtaaagat
      841 cttgctaaca ttaatacaag gagcatttca ccttttagat attaaattct tatgtggact
      901 tatttccaac taactttttc gattcctgtg agggcgggtg actggtggcc ttgtgcgatg
      961 ctgagatgta ccatggagct tttcatagaa ggcagatcgg tttcctctga ggagatactg
     1021 acagtggata cgcttaagag ttaacttgat gattgtcaca ggtgctgtga aatgcatttg
     1081 cacattgtga taagatatca tgagatgaat tgttcagaac catagccaaa agaaatgtaa
     1141 acttgcttaa aaatcctttc actctttgta tttttttaaa atggttttta ttccttagat
     1201 gtaaaatgac tacttaattt tttttgatgt aaactcatta aattcaaaga aaaaaaaaaa
     1261 aaaaaaaaaa aaaaaa
//
