LOCUS       XM_039107201            1490 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sepiapterin reductase (Spr),
            transcript variant X3, mRNA.
ACCESSION   XM_039107201
VERSION     XM_039107201.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107201.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1490
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1490
                     /gene="Spr"
                     /note="sepiapterin reductase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     ESTs, 5 long SRA reads, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 119
                     samples with support for all annotated introns"
                     /db_xref="GeneID:29270"
                     /db_xref="RGD:3753"
     CDS             697..1092
                     /gene="Spr"
                     /codon_start=1
                     /product="sepiapterin reductase isoform X3"
                     /protein_id="XP_038963129.1"
                     /db_xref="GeneID:29270"
                     /db_xref="RGD:3753"
                     /translation="MLCLTTGTLNAFSNSPGLSKTVVNISSLCALQPFKGWGLYCAGK
                     AARDMLYQVLAVEEPSVRVLSYAPGPLDTNMQQLARETSMDPELRSRLQKLNSEGELV
                     DCGTSAQKLLSLLQRDTFQSGAHVDFYDI"
ORIGIN      
        1 gtctcctgtg tgggatacgt atcgacccgg gatcccgcaa ataaagctac ctcttgctgt
       61 tacatcaaga cggctactcg tgattcctgg gggcacccca ccccgcgaac ggagcgagag
      121 acgcggctcc ccgtttaggg gtacgctttt tcacactgaa catgggtctc gttcatgaga
      181 ttgttgtgat tctcagcctt tctcttccct cgtgtgtgct cttcattttc tggttccgtc
      241 tccctagcac ctactagggg agctgctgtg ctcttccaga gaaggctttt gttgatcaga
      301 ggcaaggact tcatccaagg cagtcacctg tccggtcgct aactgtcctt tcctgtatgg
      361 attaagacaa accacccagg aacacggtag aaattgcgaa catgcctccc agaaaggggt
      421 tctacatgtg ggagtggcgc gcaaggagaa cccggaagcg ctgggaaggg gacgaggata
      481 tcctgtggag ccacgcctcc ccccctggtt attggtcact tttttcaccc aaacaccaat
      541 ggatgctgac ccgaacctcc gccgcccaag ccaaggatag gctccgcccc gtgcgggtta
      601 agtgcagcgg gcactcttgg ggatgtttcc aaaggcttcc tgaacatcaa tgacctagct
      661 gaggtgaaca actactgggc cctgaaccta acctccatgc tctgcttgac caccggcacc
      721 ttgaatgcct tctccaatag ccctggcctg agcaagactg tagttaacat ctcatctctg
      781 tgtgccctgc agcccttcaa gggctgggga ctctactgtg cagggaaggc tgcccgagac
      841 atgttatacc aggtcctggc tgttgaggaa cccagtgtga gggtgctgag ctatgcccca
      901 ggtcccctgg acaccaacat gcagcagttg gcccgggaaa cctccatgga cccagagttg
      961 aggagcagac tgcagaagtt gaattctgag ggggagctgg tggactgtgg gacttcagcc
     1021 cagaaactgc tgagcttgct gcaaagggac accttccaat ctggagccca cgtggacttc
     1081 tatgacattt aagcccatgt cctgtcacag tgcccccccc ccctcagccc tgcctaacac
     1141 acatacaagc cctccaaccc agccagcggg gagccacggg cactgccagt cctgagaagg
     1201 cttctgcaga ggctcgggag agagctgatg tgtactggag tcctctgtcc ccaggaagag
     1261 aacttagggc tgggagagca ggagaagcag aaacactgag cagatgaggc agagtctctc
     1321 gtctgtggtc gttctcaggt gaagagggcg gggtctgatt cacagagagg accgagggta
     1381 ttgaatcttt gttgtactgc cttcatcctg gggtattcac tggtcctccc tcgactctgg
     1441 tcaaatacat ggttatgggg cagatgccct agagtgtggg ctgtccttca
//
