LOCUS       XM_003751200            3102 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus signal peptide peptidase like 3
            (Sppl3), transcript variant X1, mRNA.
ACCESSION   XM_003751200
VERSION     XM_003751200.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003751200.5.
            
            On Jan 21, 2021 this sequence version replaced XM_003751200.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3102
                     /gene="Sppl3"
                     /note="signal peptide peptidase like 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 47 ESTs, 1 long SRA read, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 238 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:360822"
                     /db_xref="RGD:1562826"
     CDS             460..1614
                     /gene="Sppl3"
                     /codon_start=1
                     /product="signal peptide peptidase-like 3 isoform X1"
                     /protein_id="XP_003751248.1"
                     /db_xref="GeneID:360822"
                     /db_xref="RGD:1562826"
                     /translation="MAEQTYSWAYSLVDSSQVSTFLISILLIVYGSFRSLNMDFENQD
                     KEKDSSSSSGPFNGSSTNNSIQTIDSTQALFLPIGASVSLLVMFFFFDSVQVVFTICT
                     AVLATIAFAFLLLPMCQYLTRPCSPQNKISFGCCGRFTAAELLSFSLSVMLVLIWVLT
                     GHWLLMDALAMGLCVAMIAFVRLPSLKVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVK
                     VATQPADNPLDVLSRKLHLGPNVGRDVPRLSLPGKLVFPSSTGSHFSMLGIGDIVMPG
                     LLLCFVLRYDNYKKQASGDSCGAPGPANISGRMQRVSYFHCTLIGYFVGLLTATVASR
                     IHRAAQPALLYLVPFTLLPLLTMAYLKGDLRRMWSEPFHSKSSSSRFLEV"
ORIGIN      
        1 gcccgctccc tcctccctcg gcgggtgtgc tccgagcggc ctcgcctcac cgcctagcgc
       61 ccccctcagc cgttgccgcc gccgccgctg ccgccgctgc cgccgccggc catgtcccca
      121 ggccgccgcc gccgccgccc gagcgcggcg ctcccgcggc ccggcgcgca ctgagcgcgg
      181 gcccgagcca ccgttcgccc gccccgggcc cttgttctcc gcgccgccgc cgccgccgcc
      241 gccgccatgt tgggtttgga gccgcagcgg agccgccgcc gccgccgcgg ctgacgaggc
      301 cgagcgcgga gccgggcccg cgccggggcc cagggagccg ggcccgtcgg agtccgtcgg
      361 agcccgagtg cccgtccgcc gtgcgagcga gccgccgggc ccccggccgc gccctctgcc
      421 gccggccgag cgagccgcgg agccccgaga ggcagcacca tggcggagca gacctattcg
      481 tgggcctatt ccctggtgga ttccagtcaa gtgtcgacat ttctgatatc cattcttctg
      541 atagtctatg gtagtttcag gtctcttaat atggactttg agaaccaaga taaggagaaa
      601 gacagcagca gtagttctgg ccctttcaac ggcagcagca ccaataacag cattcagacc
      661 attgactcca cccaagctct gttccttccg attggagcgt ccgtctctct cctagtcatg
      721 ttcttcttct ttgactcagt tcaagtcgtt ttcacaatat gtacagcagt tcttgcaaca
      781 atagcttttg cttttcttct tctcccaatg tgccagtatt taacaagacc ctgctcacct
      841 cagaataaga tttccttcgg ttgctgtggg cgtttcactg ctgccgagct gctgtccttc
      901 tccctgtcag tcatgcttgt cctcatctgg gttctcactg gacactggct tcttatggac
      961 gctctggcca tgggtctctg tgtcgccatg atcgccttcg tccgcctgcc aagcctcaag
     1021 gtttcctgcc tgcttctctc agggcttctc atctacgatg tcttctgggt gtttttctcg
     1081 gcctacatct tcaacagcaa tgtcatggtg aaagtggcca cacagccagc tgacaatccc
     1141 ctcgacgttc tgtcccgcaa gctccacctg ggacccaatg tggggcgtga tgttcctcgc
     1201 ctgtctttgc ctggaaagtt ggtcttccca agctccacgg gcagtcactt ctctatgttg
     1261 ggcatcgggg acattgtgat gcccggcctc ctgttatgct ttgttcttcg ctacgacaac
     1321 tacaagaaac aagccagcgg cgactcctgt ggggcccctg gcccggcaaa catctctggg
     1381 cgcatgcaga gggtctccta cttccactgc accctcatcg ggtactttgt aggtctgctc
     1441 accgcaactg tggcgtctcg catccaccgg gccgcccagc cagccctcct ctacttggtg
     1501 ccattcacct tattgccgct cctcaccatg gcctacttaa agggtgactt acgaaggatg
     1561 tggtctgagc cattccactc caagtccagc agctcccgct tcctggaagt atgatgggca
     1621 gtgtgagaag ggaccagagc gccggctccg ccctgttctc tcaccacgtg gttttgttct
     1681 ctctacaagc tggcctggac tcaagaggca cgcctgctca cagaactgcg gtgtggctgc
     1741 agtctgcgtc tgagggtagc gttcccagag ggtgctggag ccctgccgag ggagccttct
     1801 cttctgtgct ctgggagagt ggacccttga gaaggggcag gccctccggt gctccttctg
     1861 tcttcatgga tctgcaccag actgttaact tgtggggaga agttgactta tttaaaaact
     1921 acaaaaagca aggagttgtt ctagaacttt gaacactaaa cggtcgaaaa tcagtgaacc
     1981 ccaaaacttt ggggccagtt ttcctcgggg gctccacttc agagacctag ggccgaacat
     2041 ctcgtctgcc ctattctttt ctttttcttt ttttcttttg gatttattaa atattttctg
     2101 tggtgtgaag tgacttatta aatccacaga cattgaatga cttcttacaa cgtacacata
     2161 agaatttgtt gtaatgactg tgtccaaccg tgttggcagt gagcaggaca cggttttata
     2221 catacgtaca tatatatata tatatacgtg cacatagata cctatgagta aacagccact
     2281 aaacctgcta agatcatgcc gtgtagcaga cgggcttgct gtcatttgag catgtagaac
     2341 agtttaccgt ggcttcctcg cataagctgc cgtctcctgt gtgagtcacg tgcagttgta
     2401 agctgtgggc gcgttgaact gatactcgtg ggctgtgggg gctccttctt ttgatcagtg
     2461 tagcaaaatt agggatgaaa agtttgaact ttttgaccct tttcttttta caggcttctt
     2521 cctcgcagtt tttagtaacc gcctcttgaa ccagtgcatg tattatagca gtctttgtgc
     2581 tttctgatca tagtaacaga ctacctgtaa atacattttt ctattttata tttttttgta
     2641 ttttttttga cattttgttt cattggtgcg ctgtattttc catgccctca gacccttaga
     2701 agaaaaaaaa aaacagaaaa gcagcgcaat gctgtccttg ctgttgtgat tacagtctca
     2761 gcttacctgt ggtgacagct gggctttggg gacagatgtc agttacctct gcaaatggaa
     2821 ctgatgtcca ggagctggag acagagcagg ctgctactgt gacttcagaa cctggccccg
     2881 cgctgtccgt gggcgtgcag agtctggtgt gacctcacct tcatctcaga ctggtaagct
     2941 gctgctgccc ccccgggggg tgagacggca gagtacacag cctgagcccg gcgtgtcaac
     3001 ggagcagcgt gccgccatgc tgttggttcc tctgtcctcc tcaaactctg ccgaagggtt
     3061 tgaagggttg gttttgtctc taataaatga ctcctttttc ta
//
