LOCUS       NM_001398931            1800 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus SPOUT domain containing methyltransferase 1
            (Spout1), mRNA.
ACCESSION   NM_001398931 XM_006233840
VERSION     NM_001398931.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Treiber,T., Treiber,N., Plessmann,U., Harlander,S., Daiss,J.L.,
            Eichner,N., Lehmann,G., Schall,K., Urlaub,H. and Meister,G.
  TITLE     A Compendium of RNA-Binding Proteins that Regulate MicroRNA
            Biogenesis
  JOURNAL   Mol Cell 66 (2), 270-284 (2017)
   PUBMED   28431233
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Ohta,S., Wood,L., Toramoto,I., Yagyu,K., Fukagawa,T. and
            Earnshaw,W.C.
  TITLE     CENP-32 is required to maintain centrosomal dominance in bipolar
            spindle assembly
  JOURNAL   Mol Biol Cell 26 (7), 1225-1237 (2015)
   PUBMED   25657325
REFERENCE   3  (bases 1 to 1800)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 1800)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Dec 28, 2021 this sequence version replaced XM_006233840.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2825107.1,
                                           SRR26360172.376914.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-59                JAXUCZ010000003.1  33856211-33856269   c
            60-105              JAXUCZ010000003.1  33855711-33855756   c
            106-234             JAXUCZ010000003.1  33855385-33855513   c
            235-394             JAXUCZ010000003.1  33853562-33853721   c
            395-484             JAXUCZ010000003.1  33852912-33853001   c
            485-534             JAXUCZ010000003.1  33852774-33852823   c
            535-665             JAXUCZ010000003.1  33852502-33852632   c
            666-738             JAXUCZ010000003.1  33851549-33851621   c
            739-837             JAXUCZ010000003.1  33851356-33851454   c
            838-940             JAXUCZ010000003.1  33850771-33850873   c
            941-1088            JAXUCZ010000003.1  33850506-33850653   c
            1089-1800           JAXUCZ010000003.1  33849007-33849718   c
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..1800
                     /gene="Spout1"
                     /note="SPOUT domain containing methyltransferase 1"
                     /db_xref="GeneID:499770"
                     /db_xref="RGD:1563514"
     exon            1..59
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..1157
                     /gene="Spout1"
                     /note="uncharacterized protein C9orf114 homolog"
                     /codon_start=1
                     /product="putative methyltransferase C9orf114 homolog"
                     /protein_id="NP_001385860.1"
                     /db_xref="GeneID:499770"
                     /db_xref="RGD:1563514"
                     /translation="MAERPGKRPCGPGEHGQRVEWRKWKQQKKEEKKKWKDLKIMKKL
                     ERQRAQEKQAKRQEEEEEAAAQRSNQGRPYTLSVALPGSILDNAQSPELRTYLAGQIA
                     RACAIFCVDEIVVFDEEGQDTKSVEGEFRGVGKKGQACVQLARILQYLECPQYLRKAF
                     FPKHQDLQFAGILNPLDSPHHMRQDEESEFREGVVVDRPTKAGHGSLVNCGMKKEVKI
                     DKKLDPGLRVTVRLNQQQLPECKTYKGTVVSSQDPRTKAGLYWGYTVRLASCLSAVFA
                     EAPFQDGYDLTIGTSERGSSVASTQLPNFRHALVVFGGLQGLEAGVDADPNLEVADPS
                     VLFDFYVNTCPSQGSRTIRTEEAILISLAALQPGLTQGGARPT"
     exon            60..105
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            106..234
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            235..394
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            395..484
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            485..534
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            535..665
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            666..738
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            739..837
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            838..940
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1088
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
     exon            1089..1800
                     /gene="Spout1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcgcgtgt ttttcctggc aacatggcgg agcgcccggg gaagcgtccc tgtggcccgg
       61 gtgaacacgg ccaaagggtt gaatggcgaa aatggaagca gcagaagaaa gaggagaaaa
      121 aaaagtggaa ggacctcaag ataatgaaaa aactggagcg gcagcgtgcc caagagaaac
      181 aggctaagcg ccaagaggag gaggaagagg cggctgccca gaggagcaac caaggacggc
      241 cttacactct gagtgtggcc ctgccaggct ccatcctgga caacgcccag tcacctgaac
      301 tccgcaccta cctggctggc cagatcgcca gagcctgcgc catcttctgt gtggatgaga
      361 ttgtggtgtt cgatgaggag ggccaggata ccaagagtgt ggagggagaa ttcaggggcg
      421 ttggcaagaa ggggcaggca tgtgtccagc tggcccgcat cctgcagtac ctggagtgtc
      481 cacagtatct gaggaaagcg ttcttcccca agcaccagga tctgcagttt gcaggaatcc
      541 tcaacccgtt ggacagccct caccacatgc gtcaggatga agaatctgag ttcagagaag
      601 gcgtcgtggt ggaccggccc accaaggctg gccacggctc tttggtcaac tgtggaatga
      661 agaaggaagt gaagattgat aagaaactgg accctggact tcgggtgacc gtgcggctga
      721 accagcagca gctcccagaa tgcaagacgt acaaaggaac agtcgtgtcg tcacaggacc
      781 cccgcaccaa agctggtctc tactggggct acactgtccg gctggcctcc tgcctcagtg
      841 ctgtgtttgc cgaggctccc ttccaggatg ggtatgacct gaccattggg acatcagaac
      901 gtggctccag cgtggcctct acccagctgc ccaacttcag gcatgctctt gtggtgttcg
      961 gaggcctcca agggctagaa gctggagtgg atgctgaccc gaaccttgaa gtggctgacc
     1021 ccagtgtcct cttcgacttt tatgtcaaca catgccctag ccagggcagt cgtaccatcc
     1081 gcaccgagga ggccatactc atctcactgg ccgctctgca gcctggcctc acccagggag
     1141 gggcgcgacc cacctgacag ccctctggat ccaggatgag aggaagcagc aagacaagga
     1201 ggatcacagg gagtagagat ggtcaagact tctctccaaa aataactgcc tttaatgcga
     1261 gccgtctccc agagtcttga gtgagtccta ctccatcact tgctaccagc agtgatggcc
     1321 ttgaggtttc cagctcgagc cagaatattg ggcacgaaga gcaatcccga ggcccgctcg
     1381 atgctctcga tgggcactag gaagcgctcc aaagggagag tctcatccac cggggcattg
     1441 ggcatcacat aggaacgcag ctcgatttgc ccactggctg cctccaggat caacaccttg
     1501 aagaagtgtg tgggcactgc cacgtggttc ttcccaataa cctggtactt cacataggac
     1561 ttcccatcag cctcggtcct gtggatagac ccaggcacag gtggccaaga ggcctggtta
     1621 gattcaaggt cacctcttcc aggaagcctc ctctgaccta acttccaaca agaagtttgt
     1681 ttgtgcctga ttcctccttt ggtctgggaa ctatgtatgg tggggaccaa tgcttttctg
     1741 cccaatgctg gttcagacag aatgggtggc aataaatgaa gatagaggaa tgagttctaa
//
