LOCUS       NM_001134447            1536 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus speckle type BTB/POZ protein like (Spopl), mRNA.
ACCESSION   NM_001134447 XM_001076800 XM_231058
VERSION     NM_001134447.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Errington,W.J., Khan,M.Q., Bueler,S.A., Rubinstein,J.L.,
            Chakrabartty,A. and Prive,G.G.
  TITLE     Adaptor protein self-assembly drives the control of a cullin-RING
            ubiquitin ligase
  JOURNAL   Structure 20 (7), 1141-1153 (2012)
   PUBMED   22632832
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC167106.1.
            
            [WARNING] On Jul 18, 2024 this sequence was replaced by
            NM_001134447.2.
            
            On or before Aug 29, 2008 this sequence version replaced
            XM_001076800.1, XM_231058.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167106.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1536
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /note="speckle type BTB/POZ protein like"
                     /db_xref="GeneID:296532"
                     /db_xref="RGD:1305847"
     exon            1..106
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            107..242
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     CDS             165..1343
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /note="speckle-type POZ protein-like A"
                     /codon_start=1
                     /product="speckle-type POZ protein-like"
                     /protein_id="NP_001127919.1"
                     /db_xref="GeneID:296532"
                     /db_xref="RGD:1305847"
                     /translation="MSREPTPPLPGDMSTSPVAESWCYTQVKVVKFSYMWTINNFSFC
                     REEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDEESRDYLSLYLLLVSCPKSEVRAKF
                     KFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCE
                     VSVVQDSVNVSGHTNTNTLKVPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVL
                     AARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDKMADNLLAA
                     ADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQL
                     GCKDGKNWNNNQATDIMETSGWKSMIQSRPHLVAEAFRALASSQCPQFGIPRKRLKQS
                     "
     exon            243..364
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            365..516
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            517..644
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            645..822
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            823..878
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1001
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1144
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            1145..1198
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1510
                     /gene="Spopl"
                     /gene_synonym="RGD1305847"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacagatgtg ctggcaagga aatataagca ggcaaagaag agtgaatctt cctttttcca
       61 atgtccttat ggaggtgtcc accagaagat gtgccccaga ttaaagttaa attattcaag
      121 tttgtggcat actatatgaa tcttacgact gtcataaggt ggcaatgtct cgggaaccta
      181 cccctcctct gcctggagat atgtctacta gtcctgttgc ggaaagctgg tgctacacac
      241 aggttaaagt agtgaaattt tcctacatgt ggactattaa taacttcagt ttttgtcgag
      301 aagaaatggg tgaagtgtta aagagttcaa cattttcttc tggcccaaat gataaaatga
      361 aatggtgcct gagggtaaac ccaaaaggcc tagatgagga aagtagagac tacttgtcct
      421 tgtatttgct tctggtcagc tgcccgaaga gtgaggttcg agctaaattc aaattttctc
      481 ttctgaatgc taaaagggaa gaaacaaaag caatggaaag ccaaagagca tatcgatttg
      541 tacaggggaa ggattgggga tttaaaaaat tcattagaag ggattttttg cttgacgaag
      601 ctaatggtct ccttccagat gacaagctta cgttattctg tgaggtgagt gtggtccaag
      661 attcagtaaa tgtatcagga catactaata caaacacttt gaaggtgcca gaatgtcggc
      721 tagcagaaga cttagggaat ctttgggaaa acacaagatt tacagattgc tgcttttttg
      781 tgagaggaaa agaattcaaa gctcataagt cagtgcttgc agctcgatcc ccagttttta
      841 atgcaatgtt tgaacatgaa atggaagaat gcacaaagaa tcgagtggaa ataaatgatt
      901 tagaccctga ggtttttaaa gaaatgatga gattcgttta cacaggaaag gcaccaaatc
      961 ttgataaaat ggctgacaac ttgttggcag ctgcagataa atatgcactg gaacggctga
     1021 aggtcatgtg tgaagaagct ttgtgtagta acctctcagt agaaaatgtt gctgataccc
     1081 ttgtccttgc agatttgcac agtgcagaac agttgaaagc ccaggcaata gactttatta
     1141 ataggtgcag tgttcttcga caacttgggt gtaaggatgg gaaaaactgg aacaacaacc
     1201 aagcaactga cataatggaa acatcagggt ggaagtccat gattcagtct cgtcctcatt
     1261 tagtggcaga agccttccga gcacttgctt cttcacagtg tccacagttt ggtattccac
     1321 gcaaaaggtt aaagcagtct tgagtcttcc acagacaata gaaaggtccc gaaggactcc
     1381 aatacaaacc ataagcagca gttgtttctg tctcttgtcc acagagcagg agctggaaaa
     1441 gcatattgct tgctttcacg tggataattt atggtttata cttcagcttt aaatctgact
     1501 aattaattca aaaaaaaaaa aaaaaaaaaa aaaaaa
//
