LOCUS       NM_001109240             822 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus sperm microtubule inner protein 9 (Spmip9), mRNA.
ACCESSION   NM_001109240 XM_001068273 XM_575549
VERSION     NM_001109240.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Jumeau,F., Com,E., Lane,L., Duek,P., Lagarrigue,M., Lavigne,R.,
            Guillot,L., Rondel,K., Gateau,A., Melaine,N., Guevel,B.,
            Sergeant,N., Mitchell,V. and Pineau,C.
  TITLE     Human Spermatozoa as a Model for Detecting Missing Proteins in the
            Context of the Chromosome-Centric Human Proteome Project
  JOURNAL   J Proteome Res 14 (9), 3606-3620 (2015)
   PUBMED   26168773
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473957.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001068273.1, XM_575549.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q32"
     gene            1..822
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /note="sperm microtubule inner protein 9"
                     /db_xref="GeneID:500197"
                     /db_xref="RGD:1562720"
     exon            1..81
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /inference="alignment:Splign:2.1.0"
     exon            82..118
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..631
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /note="protein TSC21; testis expressed 37"
                     /codon_start=1
                     /product="protein SPMIP9"
                     /protein_id="NP_001102710.1"
                     /db_xref="GeneID:500197"
                     /db_xref="RGD:1562720"
                     /translation="MAHVVKPQKYQVDLDMYQSSYMIDFKPFGKHKYSRVTPQEQAKL
                     DAQLQSKEFYRPKPSPNPKLEDGYPAFKRVHMTALDLGVPGFFPPRDSTAKKDDGRFT
                     TTCHYAYPASLALYLSQYDPYWLHQRADFPCLMEPERQPAPEVGKGYLLLPGCPCDHH
                     QKVKVPILNRWGPLMPFYQ"
     exon            119..211
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /inference="alignment:Splign:2.1.0"
     exon            212..822
                     /gene="Spmip9"
                     /gene_synonym="RGD1562720; Tex37"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagtgccaa caggactctc catacagctg agacacctgg ggttgaaagg gcaggaacac
       61 tgtgtcttgc caaaagaaaa ggtccttggc catggcacat gtggtgaaac cccaaaagta
      121 ccaagtcgac ctagatatgt accaaagctc atacatgatc gacttcaagc ccttcgggaa
      181 gcacaaatac tccagagtca caccacaaga gcaggccaag cttgacgctc agctccaaag
      241 caaagagttt taccggccca agcccagccc caaccccaaa ctggaggatg ggtatcctgc
      301 tttcaaaaga gtccacatga ctgccctaga cttgggagtt cctggcttct tcccgccacg
      361 agactcaacg gctaagaagg atgatggcag gtttaccacc acctgccatt acgcgtaccc
      421 agcttccctg gctctgtacc tgtcgcagta cgacccctac tggctccacc agagggcaga
      481 tttcccgtgc ctcatggaac cagagcggca gcctgctcca gaagtgggca aaggctacct
      541 tctactccct ggctgtccct gtgatcatca ccagaaggtc aaggtcccca tcttgaatag
      601 gtggggcccc ttgatgccgt tttaccagta gaagtgcgag aatacccgct gtctcaatgt
      661 atgaaggaat tccatgccga tgctcacaga gaaggctccc aaaaaataaa ccgggaagat
      721 gttccttttg ccaaggggta ttgcttcatc ataatccggg tctcatctca gtgcaaaagg
      781 agggaaggaa ggagggaaaa tcggtttgtg tgctgaatcg aa
//
