LOCUS       NM_001401268             667 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus sperm microtubule inner protein 1 (Spmip1), mRNA.
ACCESSION   NM_001401268 XM_008762840
VERSION     NM_001401268.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Feb 7, 2022 this sequence version replaced XM_008762840.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.1310057.1,
                                           SRR26360181.533766.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-510               JAXUCZ010000004.1  59036926-59037435
            511-667             JAXUCZ010000004.1  59038692-59038848
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..667
                     /gene="Spmip1"
                     /gene_synonym="Atp6v1fnb"
                     /note="sperm microtubule inner protein 1"
                     /db_xref="GeneID:103692087"
                     /db_xref="RGD:9472094"
     exon            1..510
                     /gene="Spmip1"
                     /gene_synonym="Atp6v1fnb"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..620
                     /gene="Spmip1"
                     /gene_synonym="Atp6v1fnb"
                     /note="ATP6V1F neighbor; sperm associated microtubule
                     inner protein 1"
                     /codon_start=1
                     /product="protein SPMIP1"
                     /protein_id="NP_001388197.1"
                     /db_xref="GeneID:103692087"
                     /db_xref="RGD:9472094"
                     /translation="MSRQLNMDTVRQNFWKEEYLKEMMLRYEWQRKYGTLVKAKQKAK
                     AASRLPFKLPTMLPKVPVSLPPVSKTAPSKAPSPTPEPLFLSEMYPVPPDTKALLYEG
                     ISHDLQGRYQYLNTRKLDLPETRYLFPITTNFTYGWQLGPPAKQEMVSCKMCRIESFF
                     RKNGAFAFLDPRDLAL"
     exon            511..667
                     /gene="Spmip1"
                     /gene_synonym="Atp6v1fnb"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgaccatcc cagggcagct gtccactgtc cacttgctat gcccactcag tactagctaa
       61 accttgatac tgctcattcc tttgccacca tgtcgaggca gcttaacatg gacacggtgc
      121 ggcaaaactt ctggaaggaa gagtatctca aagagatgat gttgcgttac gaatggcagc
      181 gcaagtacgg gactctggtg aaggccaagc agaaggctaa ggctgcatcc cgtctgccct
      241 tcaaactgcc taccatgctg cctaaggtcc cagtctcact accacctgtc tccaaaacag
      301 ccccgtctaa agcccccagc cctactccag aacctctttt tctgtcagaa atgtacccag
      361 ttccacctga caccaaagcc ctgctgtatg aaggcatctc ccatgacttg caggggcgct
      421 accagtatct caacacccga aaactggacc tgccagagac gcgttacctg ttccccatca
      481 ccaccaactt cacatatggc tggcagctgg gtcctccagc aaagcaagaa atggtttcct
      541 gcaagatgtg ccgaattgag tcattcttcc gtaagaatgg tgcctttgca ttcctggatc
      601 cccgagatct ggccctctga gcttgggcct ggcagtgact taggaaccaa aagaagaaat
      661 aagagga
//
