LOCUS       NM_001399680            1916 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus spindlin interactor and repressor of chromatin
            binding (Spindoc), mRNA.
ACCESSION   NM_001399680 XM_006230863
VERSION     NM_001399680.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Bae,N., Gao,M., Li,X., Premkumar,T., Sbardella,G., Chen,J. and
            Bedford,M.T.
  TITLE     A transcriptional coregulator, SPIN.DOC, attenuates the coactivator
            activity of Spindlin1
  JOURNAL   J Biol Chem 292 (51), 20808-20817 (2017)
   PUBMED   29061846
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 12, 2022 this sequence version replaced XM_006230863.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.153635.1,
                                           SRR26643289.3796.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760433 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-325               JAXUCZ010000001.1  213993109-213993433 c
            326-655             JAXUCZ010000001.1  213985417-213985746 c
            656-805             JAXUCZ010000001.1  213985192-213985341 c
            806-931             JAXUCZ010000001.1  213984928-213985053 c
            932-1129            JAXUCZ010000001.1  213984565-213984762 c
            1130-1916           JAXUCZ010000001.1  213971995-213972781 c
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1916
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /note="spindlin interactor and repressor of chromatin
                     binding"
                     /db_xref="GeneID:361719"
                     /db_xref="RGD:1308106"
     exon            1..325
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
     CDS             193..1341
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /note="uncharacterized protein C11orf84 homolog"
                     /codon_start=1
                     /product="spindlin interactor and repressor of
                     chromatin-binding protein"
                     /protein_id="NP_001386609.1"
                     /db_xref="GeneID:361719"
                     /db_xref="RGD:1308106"
                     /translation="MALRAEGAAALDCFEVTLKCEEGDDDDEEAVVVAVIPRPEPMLR
                     VTQQEKTPPPRPNLLEAGVEGCEEPKQQVSWEQEFLVGNSPGGSGRALCMVCGAEIRS
                     PSADTARTHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDIQTDQPSLPSLESGQDG
                     QPDPISNPDPARMPAEIVVLLDSEDNPSLPKRLRPRGLRPLELPVAPVIEQGNKKPRG
                     QRWKESPEDEPARKKRSRHVTKILDPDPDPPSPESPTETFAAPAEVRHFTDGSFPPGF
                     VLQLFSHTQLRTTDSKNSSKDSKAAEGLPQPQSPSSASPPGLRGTLDLQVIRVRMEEP
                     PAVSLLQDWSKHPQGTKGLGTGDNPGWPTVLSESSATVKGQPEAGSGV"
     exon            326..655
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
     exon            656..805
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
     exon            806..931
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1129
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
     exon            1130..1916
                     /gene="Spindoc"
                     /gene_synonym="RGD1308106"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggatcgaacc ctccccgccc ggggtcgtga cgcgttgaag cccgtggctg gcggggcggc
       61 cgggagagcg gcgggtgagt taggcgggcc gcgggcccgg cgtggtccgg gacaggaggc
      121 ggccgccaca ggcggcgcgc cgaggtctgt gcgcttgtcc tcggctatcg ggtcgccctt
      181 cttcgcctcg ccatggccct gagagccgaa ggcgccgcgg cgctggattg cttcgaggtg
      241 acgctcaagt gtgaggaagg ggacgacgac gacgaggagg ccgtggtggt ggccgtgatc
      301 ccgcggccgg agccgatgct ccgagtaacc caacaggaaa agacgccacc acctcggcct
      361 aacctgctgg aagcaggtgt cgaaggctgt gaggagccca agcagcaagt gtcatgggag
      421 caggagttcc tggtggggaa cagccctgga ggcagtggac gggcgctgtg catggtgtgt
      481 ggggctgaga tccggtcccc atcagcagac actgctcgca cacacatcct ggagcagcat
      541 cctcataccc tggacctcag cccctctgag aagagcaaca tcttggaagc ctggagtgaa
      601 ggggttgccc ttctgcaaga catccaaact gaccagccat ccctgcccag cctagagtca
      661 ggccaggatg gccagccaga ccccatctcc aacccggatc ctgccaggat gccagcagag
      721 atcgtggtcc tcttggactc cgaggacaac ccatctctcc ctaagaggct ccggcccaga
      781 ggacttcgtc cccttgagct gcctgttgcc cctgtcatag agcaaggaaa taaaaagccc
      841 cgtggtcaga gatggaaaga gtcccctgag gatgagcctg ctagaaagaa gagaagcagg
      901 catgtgacca aaatcctgga ccctgaccca gaccccccat ctcctgagtc acccacagag
      961 acgttcgcag caccagctga agtccgacac ttcactgatg gcagcttccc tcctggtttc
     1021 gtcctccagc tcttctccca cacgcagctc aggaccaccg acagtaagaa ctcttcaaaa
     1081 gacagcaaag ctgctgaggg cctgccccag ccacaaagtc cctcttcagc ctcccctccg
     1141 gggctccgtg ggacactgga tctccaggtt atccgtgttc ggatggagga accaccagcc
     1201 gtcagcctct tacaggactg gtccaagcac ccccagggca ccaaggggtt gggaacaggt
     1261 gacaacccag gctggcccac agttctgtca gaatccagtg ccactgttaa gggacaacca
     1321 gaggcaggaa gtggagtata ggttttcagt tttctagaga gggagaggtg ggaagaagga
     1381 aaggtaggcg ggaggaggca gtcatccccc attggcttaa atctcagatc tgcccagctt
     1441 ggccacctga tggagaattt ataaaaccag gtgccaggac aatgtggagg ggggaggtgt
     1501 gacattactg tcacattggg gtactagaaa atgcctgccc ttggccaagc ctgaggtggg
     1561 cagaggtggc ttaggttgtt gggtggtaag gcattggcct gtggagaaca ccttccccaa
     1621 tcctttgctg accccacacc tcctccttcc tctcagctcc ccaccattct cccctggcac
     1681 agtgccttat gcagaggtgg tcatgatggg gtttgaactg agtcccacta cctcggggga
     1741 cacctttcct cccccacttt tggctcctac agcaggaggc ctccattacc tcttacctcc
     1801 tcattcctgc cgagagttcc ctgtaccacc cctttacctg ttgtcctgtt gcatctattg
     1861 tcctgttgta tatattgcct ttgttgacaa taaattattt ttttttttta ttaaaa
//
