LOCUS       NM_001399447            3814 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus SPEM family member 3 (Spem3), mRNA.
ACCESSION   NM_001399447 XM_006246845
VERSION     NM_001399447.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 7, 2022 this sequence version replaced XM_006246845.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.63632.1,
                                           SRR26360181.2362216.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-153               JAXUCZ010000010.1  55034890-55035042   c
            154-211             JAXUCZ010000010.1  55034555-55034612   c
            212-3814            JAXUCZ010000010.1  55030807-55034409   c
FEATURES             Location/Qualifiers
     source          1..3814
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..3814
                     /gene="Spem3"
                     /note="SPEM family member 3"
                     /db_xref="GeneID:102546484"
                     /db_xref="RGD:7642598"
     exon            1..153
                     /gene="Spem3"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..3798
                     /gene="Spem3"
                     /note="mucin-12-like"
                     /codon_start=1
                     /product="uncharacterized protein SPEM3"
                     /protein_id="NP_001386376.1"
                     /db_xref="GeneID:102546484"
                     /db_xref="RGD:7642598"
                     /translation="MGERTYHGAHSCSGTNLRKCQDLGDSILLILGSFILLNVGINVV
                     TLLWKHLKNSLRILFHHYFPKDTKNLCSKIPARFHHRPGFLPAHVNHLDSWIPDTNDE
                     NISTCCWMPPQCGHGRAPQEAPWELWKEGLMGAGEAPQAVAMKTQASSFSRPEISPQI
                     PKTSKLNMVLPSSPQDNKTKAPLDSQPHAPAQALTYTSTNTHEHPSTQSQTQTSEHSE
                     TRAQGVKHTPPSRAPDYIPARSEVPKPANALSSTSSRQPAPTPPYPSIHVPPHSQSHI
                     LGQAQAHILPSSSLQVPAPIPAQGLGHSPKQNSVHSSPQAPAKSPAYTSFQSKGHEPV
                     PIPVHTLTHSQADVPKETTSQVLAHSQIHSYARTSVPNPTSASVPSPTFTPATCVLTP
                     VPTCAPAPTLALSMTMTTTQAPAQVPTTTSTPILSSVPSMVATFGSNSSTGHMVYDAR
                     GVKQSTVLKHSSQDSRYFRKDLNILSRSQEVTTLVNSGSAEQRPKQYSGSSAEPPSGP
                     MLGYLELGNMEWKISDNVKDKFSKPKTFPYNSVHPCCSERKTEEAQAPLYHQFLVYAQ
                     DDTPSKPCLHSPSTTQSTLPTIPPPCTLSLPLVSPRTFTVSQANYQKPSNLTQAPSFL
                     STPNSPQTGSSSHFSMPSQFSTISQSLIQPPNPENQNLNQGLGLQKTPPSLAKDSGVP
                     KNTGFTQDPGLQKNPSLTRDPGLHKNPSLIPNPGFQKNPGLTQDPGLCKNPSLTPNPG
                     FQKNPGLTQDPGLHKNPGLTLTPSINKNLGFYKFPDHTQDLYLCMNPNSSQDSCLQKN
                     LDVSQDSGLRSPAAVQDAGVLRNRPALGVIQHSSPHKNVLFNETSGQRTLSFMQDSLV
                     YRNAPSNQDTVIDKNKDPSPETIYKKPDPCRDSGGNNATGNVQHPGVCRNVGLTQDSR
                     PQKSQCHTEDSDVNKGPGLTKESGPHKNLDLVQTSCLHKSSGLTQDSGDYKNLGLLQD
                     SGTCRASDLLQDSDSYKSSSLINTTEPEKRSDLNQDVSIYSSEHSQSSIPQECPETDQ
                     DPCPHRDPALGRGSGFKPPGLTQQASPCKDSSLILDPGLTKRLSYVPSTDSVQISGSL
                     PTVMLTPSPVKPFVCKMASQKDNTGQHLSWTPVPVSQNSCPPKAQVVPTDLKSFSEVP
                     VLIELQPPSRRLDSQDWAYPVDTVPPAFQKYRQMSMPPKINWKPHCPGPGTRSGHVVF
                     DSRQKPLVTGREKCEALTSRRFRQETPRNSEETQKEWGYENVMRTLNKDGTNTHRE"
     exon            154..211
                     /gene="Spem3"
                     /inference="alignment:Splign:2.1.0"
     exon            212..3814
                     /gene="Spem3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgggacccc aggtcatggg tgaacgaacc taccacggag cccattcctg ttctggcacc
       61 aacctcagga aatgccagga tttaggagat tcaattcttc tgattctggg cagcttcatc
      121 ttgctcaacg tgggaatcaa tgtggtgact ctgctctgga agcatctgaa gaactccttg
      181 aggattcttt tccatcacta tttccccaaa gataccaaga acctgtgttc gaaaatccct
      241 gcccgattcc accaccgtcc cggtttccta cctgcgcacg tcaatcacct tgactcttgg
      301 ataccagaca caaatgatga gaacatttct acgtgctgct ggatgccacc ccagtgtgga
      361 cacggcagag ctccccaaga agctccatgg gaactgtgga aagaaggact gatgggagct
      421 ggagaagccc ctcaggctgt agccatgaag actcaagctt cttccttttc caggccagag
      481 atttctccac aaattccaaa gacaagcaag ctgaacatgg ttctaccatc ttcaccccaa
      541 gacaacaaga ctaaggcacc acttgacagc caaccccatg ctccggccca ggctctaacc
      601 tatacctcaa ccaacaccca tgagcacccc tccacccagt cccagactca gacctcagag
      661 cactctgaaa ccagggcaca gggtgttaag catacaccac catcccgggc acctgactat
      721 atcccagccc gcagtgaagt ccccaaacca gccaatgctc tatcctcaac ctcatcccgt
      781 caaccagccc ccaccccacc ctatccctcc atccatgtcc cacctcatag tcaatcccat
      841 atcttgggtc aggcccaggc ccacatcctg ccctctagct cactccaggt tccagcccca
      901 atcccagccc agggcttagg ccacagccct aagcaaaact cagtacattc atcacctcaa
      961 gccccagcca agtctcctgc atacacttcc ttccaatcca aaggccacga accagtccca
     1021 atcccagtac acaccttgac ccactcccaa gctgatgtcc ctaaagagac aacgtctcaa
     1081 gtcttagcac attctcagat tcattcgtat gcccgtacct cagtgcccaa cccaacctct
     1141 gcctcagtcc cttccccaac ctttacccca gccacttgtg tccttacccc tgtcccaacc
     1201 tgtgccccag cccctaccct agcactgtcc atgaccatga ccactactca agcgcctgct
     1261 caagttccta ccaccacctc taccccaatc ctgtcttctg ttccttctat ggtggcgact
     1321 ttcggttcca actcttctac tggccatatg gtctatgatg cccgaggagt gaagcagagc
     1381 actgtcctta aacacagctc ccaggactcg aggtatttca ggaaggactt gaacatcctc
     1441 tccagatctc aagaggtgac gaccctggta aattctggtt ctgctgagca aagaccaaag
     1501 cagtacagtg ggagcagtgc tgagcctcca tccgggccta tgctgggcta cctggagttg
     1561 gggaacatgg aatggaagat ctcagataat gtaaaagata agttttccaa gcccaagacc
     1621 ttcccttaca acagcgttca tccttgctgt tctgagagga aaactgagga agcccaggct
     1681 ccactctacc accagttcct ggtctatgcc caggacgata ctccctcgaa accctgcctt
     1741 cactctccca gcactactca gagcacactg cccaccatcc ccccgccgtg cactctctct
     1801 ctgccgcttg tttctcccag aacattcact gtttctcagg ctaactatca gaagccctcc
     1861 aatttaacac aagccccctc ctttctctct actcccaatt ctcctcagac gggctcctct
     1921 tcccacttct ctatgccttc tcagttctcc accatttctc agtccttaat ccaacctcca
     1981 aaccctgaga atcaaaacct taaccaaggc cttggccttc aaaagactcc accatccctt
     2041 gccaaggatt ctggagttcc caagaacaca ggctttacac aagatccagg actccagaaa
     2101 aacccgagcc ttacccgaga tccaggcctc cacaagaacc caagccttat cccaaatcca
     2161 ggattccaga agaacccagg ccttacccaa gatccaggcc tctgcaagaa cccaagcctt
     2221 accccaaatc caggattcca gaagaaccca ggccttaccc aagatccagg cctccacaag
     2281 aacccgggtc ttaccctgac cccaagcatc aacaagaatt tgggtttcta caaatttcca
     2341 gaccatactc aagatcttta cctctgcatg aatccaaaca gttctcaaga ctcttgcctt
     2401 cagaagaatc tggatgtctc tcaggactct ggcctaagga gtccagctgc cgttcaagat
     2461 gctggtgtcc ttaggaaccg tccagccttg ggtgtcatcc aacactctag tccccacaag
     2521 aatgtattat ttaatgaaac atctggccag aggactttga gctttatgca agactctctg
     2581 gtctatagga atgctccatc aaaccaagat actgtaatcg acaaaaataa agacccctcc
     2641 ccagagacca tctataagaa gccagacccc tgtcgagatt ctggaggtaa taatgctaca
     2701 ggaaatgtac aacacccagg agtctgcagg aatgtaggcc ttacccaaga ctctagacca
     2761 cagaagagcc agtgccatac ggaagattct gatgttaaca aaggcccagg acttaccaag
     2821 gaatctggtc cccataaaaa cctagatctt gttcaaactt cttgcctcca taagagctct
     2881 ggtctcacac aagactcagg agactacaag aatctaggcc ttctccaaga ttctggaacc
     2941 tgtagagcct cagatcttct ccaagactct gactcctaca agagcagtag tctcatcaat
     3001 accactgaac ctgaaaaaag atcagacctt aaccaagatg tcagcattta cagttcagaa
     3061 catagccaaa gctctatccc tcaggaatgc ccagaaacgg atcaagatcc ctgtcctcat
     3121 cgggacccag cactcggccg gggctccggc ttcaagcctc caggccttac ccagcaagct
     3181 agcccctgca aggactcaag ccttatccta gaccctggcc tcactaaaag actaagctat
     3241 gttccaagta cagattctgt ccaaatctca ggctcacttc cgacagtaat gctaacacct
     3301 tccccagtga aacctttcgt atgcaagatg gcgtctcaaa aggacaatac tgggcagcac
     3361 ttatcctgga ctcctgtccc tgtcagtcaa aactcctgcc ctcccaaggc ccaggtggtc
     3421 cccacggacc tgaaatcttt ttcagaggta cctgttctga ttgagctaca accaccctcc
     3481 cggcggttag acagccaaga ctgggcatac cctgtagata cagttcctcc agctttccag
     3541 aaatatcgcc agatgtctat gcctcccaaa atcaactgga agccccattg ccctggacca
     3601 ggcacccggt caggtcatgt ggtctttgat tcccgccaga aaccgttagt aactggcagg
     3661 gaaaagtgtg aagctctaac ttccaggcgt tttcgtcaag agacacccag aaactcagag
     3721 gagacccaga aggagtgggg atatgaaaat gtgatgagga ccttgaacaa agatgggaca
     3781 aatactcatc gggaataaag agacaagaga aaca
//
