LOCUS       XM_006239768            1929 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus speedy/RINGO cell cycle regulator
            family member A (Spdya), transcript variant X4, mRNA.
ACCESSION   XM_006239768
VERSION     XM_006239768.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006239768.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006239768.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1929
                     /gene="Spdya"
                     /gene_synonym="Gs4; Lm23; Spdy1; Spy1"
                     /note="speedy/RINGO cell cycle regulator family member A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 7 ESTs, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:192209"
                     /db_xref="RGD:621730"
     CDS             149..1084
                     /gene="Spdya"
                     /gene_synonym="Gs4; Lm23; Spdy1; Spy1"
                     /codon_start=1
                     /product="speedy protein A isoform X2"
                     /protein_id="XP_006239830.1"
                     /db_xref="GeneID:192209"
                     /db_xref="RGD:621730"
                     /translation="MRHNQMCCETPPTVTVHVKSGSNRSHQTRKPVSLKRPILKDSWQ
                     ASEKNAHNNKPKRPRGPCLIIQRQEMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAM
                     TFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEEAKYEIFPWALGKNWRKLFPNFL
                     KLRDQLWDRIDYRAIVSRRCCEEVMAIAPSHYIWQRERSVHHSGAARNYNRDEVHLPR
                     GPSATPVDCSLCGKKGRYVRLGLSSSSSSSSDIVELTGKRSQELHNSLSMDMIGDPSQ
                     ANTYSQANDHQSKKENETNFVKKTKSMGWFAESEE"
ORIGIN      
        1 gctcccggcc cgcagcttaa ggctggtaag cgggtgttgc ggcctgcggc ttgcgaccag
       61 cgcgcaaccg cctgaggtag atcgctgagg cggaggctgc gggccgctcg cgcttcgctg
      121 acctgcacag gaatcttggg aagctaaaat gcggcataat cagatgtgtt gtgagacacc
      181 acctactgtc actgttcatg taaaatcagg ttcaaatagg tcacatcaaa ctagaaagcc
      241 tgttagtctg aagcgtccta ttcttaaaga tagttggcaa gcatctgaaa aaaatgcaca
      301 taataacaaa cctaagcggc ccagagggcc ttgtctaatt atacagcgtc aggaaatgac
      361 tgctttcttt aaattatttg atgatgattt aattcaagat ttcttgtgga tggactgctg
      421 ctgcaaaatc gcagacaagt atcttttggc tatgaccttt gtttatttca agagagctaa
      481 atttactata agtgaacata ccaggataaa tttctttatt gctctatatc tggctaatac
      541 agttgaagaa gatgaagaag aagccaagta cgaaattttt ccatgggctt tagggaaaaa
      601 ctggagaaaa ttgttcccta atttcttaaa gttacgggac cagctgtggg acagaattga
      661 ctatagggct attgtaagcc ggcgctgctg tgaagaggtt atggccattg caccaagcca
      721 ttacatctgg caacgcgagc ggtctgtgca ccacagtgga gctgctagga actacaacag
      781 agatgaggtt catctgcccc ggggacctag tgccacacca gtggattgct cactgtgtgg
      841 taaaaaagga agatacgtga gactgggact gtcttcatca tcatcttcat ccagtgacat
      901 agtagagcta acgggaaaac gttctcagga attacacaat tctttatcaa tggacatgat
      961 aggtgatcct tctcaagcta atacctattc tcaagccaat gaccatcaat caaaaaaaga
     1021 aaatgaaact aattttgtga agaaaaccaa atctatggga tggtttgcag agagcgaaga
     1081 atgacaaggc tcaactaaag cacgctggag tcacagctac aaaatggcaa actaaattcg
     1141 agatggtcag atgggacagt tacccagttg ttcaatggtc tttagcctct gttatttttc
     1201 aaacaaatgt aaaagtcaca caaatcatag taataactaa acataccaaa aaaactaaac
     1261 ataccaaaat aaggtaaaaa cactttgcaa ggtagggact gataatacac agttctaatt
     1321 agatacttct ttgtcttcaa gttcactgca gtcatctcag gggccagttc agttgtggtc
     1381 tgaaccagaa gacaagaaga gtgagcttaa aagagaaaac aattaagggc ataacactga
     1441 attaattaga agaaacattt aattagtata ctctgaaaac agtactgaca tgtgtgacca
     1501 cttgacgagt gaaaaagtct agcaataggc acatggtctg tacatgactc ctcctgtcac
     1561 agaagaggca cactgcactg tagaaatgct ttagagtctg ttcacagagt gtgaaatgtt
     1621 aaacactgtc cttctcctgt aagaactttt tttttttttt gagcattcgt ttgggggcta
     1681 tttggctagt tagtaagaaa catttgtcag tcatcccaca gcaactttac agataagctt
     1741 atacccaaaa gaataagcct gtttcataaa tcaatgtatc tgaaacccat ttcttggcct
     1801 aaatattgtg tacctatgag tacctaaact tgcagcaaca ttttaggagc tccattttgc
     1861 aactgactca gcaaaataga aaaatacatt tcattttctg tactaataaa aaataaaaaa
     1921 taaaaatcc
//
