LOCUS       NM_001398872             809 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus SPC24 component of NDC80 kinetochore complex
            (Spc24), mRNA.
ACCESSION   NM_001398872 XM_003750448
VERSION     NM_001398872.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Kiba,T., Kintaka,Y., Suzuki,Y., Nakata,E., Ishigaki,Y. and Inoue,S.
  TITLE     Gene expression profiling in rat liver after VMH lesioning
  JOURNAL   Exp Biol Med (Maywood) 234 (7), 758-763 (2009)
   PUBMED   19429849
  REMARK    GeneRIF: Gene expressions of ELOVL6 and SPC24 were upregulated, and
            SERPINA7 was downregulated in the livers of rats with ventromedial
            hypothalamic lesions.
REFERENCE   2  (bases 1 to 809)
  AUTHORS   Bharadwaj,R., Qi,W. and Yu,H.
  TITLE     Identification of two novel components of the human NDC80
            kinetochore complex
  JOURNAL   J Biol Chem 279 (13), 13076-13085 (2004)
   PUBMED   14699129
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000008.1.
            
            On Dec 27, 2021 this sequence version replaced XM_003750448.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM059676.1, BI303598.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN12840107
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-183               JAXUCZ010000008.1  28581117-28581299   c
            184-328             JAXUCZ010000008.1  28578006-28578150   c
            329-510             JAXUCZ010000008.1  28577589-28577770   c
            511-809             JAXUCZ010000008.1  28576409-28576707   c
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..809
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /note="SPC24 component of NDC80 kinetochore complex"
                     /db_xref="GeneID:363028"
                     /db_xref="RGD:1307631"
     exon            1..183
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..617
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /note="spindle pole body component 24 homolog; SPC24,
                     NDC80 kinetochore complex component, homolog, pseudogene
                     1"
                     /codon_start=1
                     /product="kinetochore protein Spc24"
                     /protein_id="NP_001385801.1"
                     /db_xref="GeneID:363028"
                     /db_xref="RGD:1307631"
                     /translation="MAAFRDMEEVSYGLLSLLAANRAEAQQRRLLGRHEQMVERLLEM
                     QDGADRQLRETLAVEEEVAQSLLELKECTRLGGTELQQLEVELQKASKEDSCLQARLC
                     QLTAELQELREMEEDLQRQERDVDEDNTVTIPSAVYVAQLYHQISKIEWDYECEPGMV
                     KGIHHGPSVAQPIHLDSAQLSQKFISDYLWSLVDTAW"
     exon            184..328
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            329..510
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /inference="alignment:Splign:2.1.0"
     exon            511..809
                     /gene="Spc24"
                     /gene_synonym="RGD1307631; Spbc24; Spc24-ps1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggctcggac taggcggtca gtcatggcgg ctttccgtga catggaggag gtgagctacg
       61 ggctactgag cctgctggcg gccaaccgcg ccgaggcgca gcagcggcgg ctgctcgggc
      121 gtcatgagca gatggtggag cgactgctgg agatgcagga cggcgccgac cggcagcttc
      181 gggagactct ggctgtggag gaggaagtgg ctcagagcct tcttgaactg aaggaatgta
      241 cgcgcctggg aggcaccgag ctccagcagc tggaagtgga gctccagaag gccagcaagg
      301 aggattcctg tctgcaggcc aggctctgtc agctcaccgc agagctgcag gagctcaggg
      361 agatggagga agatctccag cgacaggaga gagacgtgga tgaagacaac actgtcacca
      421 tcccctctgc agtgtatgtg gcgcagctct accaccaaat tagtaaaata gagtgggatt
      481 atgagtgcga gcccgggatg gtcaagggca ttcaccacgg ccccagcgtg gcccagccta
      541 tccacttgga cagtgcgcag ctctcacaga agttcatcag cgactacctc tggagcctgg
      601 tggacactgc atggtagcca gagccttgac cttgcataga attgaggttg aaggggccaa
      661 gaaagggatc actgtaaaat taaattctat atgtaaacga gttcgtcaat ttattcgctt
      721 gctttgagac agtgtctcgt tgagtccagg ccggcctggg acgtcttctt tattttttta
      781 ttacattaaa aatcattact tttactgta
//
