LOCUS       NM_001014102            2506 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus spermatogenesis associated, serine-rich 2-like
            (Spats2l), mRNA.
ACCESSION   NM_001014102 XM_237177
VERSION     NM_001014102.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085874.1.
            
            On Apr 20, 2005 this sequence version replaced XM_237177.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085874.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760384, SAMN11044071
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     gene            1..2506
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /note="spermatogenesis associated, serine-rich 2-like"
                     /db_xref="GeneID:316426"
                     /db_xref="RGD:1309930"
     exon            1..274
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            275..335
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     CDS             297..1973
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /codon_start=1
                     /product="SPATS2-like protein"
                     /protein_id="NP_001014124.1"
                     /db_xref="GeneID:316426"
                     /db_xref="RGD:1309930"
                     /translation="MAELNTHVNVKEKIYAVRSVVPNKSNNEIVLVLQQFDFNVDKAV
                     QAFVDGSAIQVLKEWSMTGKKKNNKRKRSKSKQHQGNKDAKDKGERPEVGPLQPQAPL
                     VQNGHMNGCEKDSSSPDSAREKLALTPREKKISILEEPPRAQRGITEGSRLLQQKMSL
                     DGNPKAIHGPSERSDGLQWSAGQPCNPSKPKAKTSPVKSNAPAAHLEIKPDELAKKRG
                     PNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMD
                     KVKEEAMDILTARQKKAEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKA
                     ARFSCDIEQLKAQILICGEITHPKNNYSSRTPCSSLLPLLNTHAVASGKQGNFSRKSS
                     GHNKPNEGKAANPKMVSGLPSTADACQQTMPTNKQQNGPSNQRRRFNPQYHNRLNGPA
                     KSQGSGNEADPMVKSNNRHEHRRQPHNGFRPKNKGGAKNQEAPLGTKAPEAPPHSEKA
                     RRRQHAADNLETRPFRGNVGRVSQCNLCPTRIEVSTEATVLSVPAVTLVA"
     exon            336..444
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            445..494
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            495..741
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            742..948
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1084
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1143
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1253
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1356
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            1357..1577
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
     exon            1578..2480
                     /gene="Spats2l"
                     /gene_synonym="RGD1309930"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catccctttc agtagaggag gccctctcag gtctgcgtgt ctgaggccac tagtccagtg
       61 ctgattattc agacacaccc aagatcctac cactactcca gttcctggct ccacctcgtc
      121 agtactgcgg tgacttactg gtcacagtca acaaaagttg ataaaggtgg cccttgggag
      181 attggaattg actgttgggc tgctgaggag gaagcaagta gctggaacag tctatgcctg
      241 acagcccgaa gcggaacacc aagagacctt gagaggctta tacccctaga aggaagatgg
      301 ctgaactcaa cactcatgtg aatgtcaaag agaagatcta cgcagttaga tcagttgttc
      361 cgaacaaaag caataatgaa attgtcctgg tgctccaaca gtttgatttt aatgtggata
      421 aagccgtgca agcctttgtg gacggcagtg ctattcaggt tcttaaagaa tggagcatga
      481 cggggaaaaa gaagaataac aaaagaaaaa gaagcaaatc caagcagcat caaggcaaca
      541 aagatgctaa ggacaagggg gagaggccgg aggtggggcc cctgcagccc caggcaccac
      601 tggtacaaaa tggtcacatg aatggctgtg aaaaggacag ctcatcccct gactctgcca
      661 gagaaaaact ggccctcaca ccacgtgaga aaaagatctc aatactggag gaaccaccaa
      721 gggctcagcg tgggatcaca gaaggcagca gactactgca gcagaaaatg tccttagatg
      781 ggaaccccaa agctattcat ggaccatcag agaggtcaga tggcctacag tggtcagctg
      841 ggcagccttg taacccaagc aagcctaagg caaaaacatc tcctgttaag tccaatgccc
      901 ctgcagctca tcttgaaata aagccagatg agctggcaaa gaaaagaggt ccaaatattg
      961 agaaatcggt gaaggatctg cagcgctgca ctgtttctct gacgagatac cgagtcatga
     1021 tcaaggaaga ggtggacagt tctgtgaaga agatcaaagc agcttttgct gagctacaca
     1081 actgcatcat tgacaaagaa gtttcactga tggcagagat ggataaagtt aaagaagaag
     1141 ccatggacat cctgactgcc cgtcagaaga aggcagagga gctgaagcga ctgactgatc
     1201 tagccagtca aatggcagag atgcagctgg ccgaactcag agctgaaatt aagcactttg
     1261 tcagcgaacg caaatatgat gaagagctag ggaaagccgc ccgcttctcc tgcgacattg
     1321 aacagctgaa agcccaaatc ctgatctgcg gagaaatcac acatccaaag aacaactatt
     1381 cctcaagaac tccctgcagc tccctgttgc ctctgctgaa cactcatgcg gtagcttccg
     1441 ggaagcaggg gaatttttcc cggaagtcat ccggtcacaa caagcccaat gaggggaaag
     1501 cagcgaaccc caaaatggtg agcggtcttc ccagcactgc cgatgcatgt cagcagacca
     1561 tgcctactaa caagcagcag aatggacctt ccaaccaaag acgaagattt aatccacagt
     1621 atcacaacag gctaaatggt ccagccaagt cacagggcag tggtaatgaa gctgatccca
     1681 tggtgaagag caacaaccga catgaacaca gaagacagcc acataatggt tttcgtccca
     1741 aaaacaaagg tggtgccaaa aaccaagagg cccccttggg gacaaaggcc ccagaggccc
     1801 caccacattc tgaaaaggcc cgtcgaaggc agcacgctgc agacaactta gagaccaggc
     1861 ctttccgggg taatgttggt agggtttcac agtgcaatct ttgtcccact agaatagaag
     1921 tttccacaga ggccacggtt ctctcagtcc cagctgtgac gctggtggcc tgagctggga
     1981 aggaagagag caggttttgc ctggttttgg ttccctgccc aaggtgctga cccaattcgc
     2041 tgccaaaaga gagtcaatca gaatatacaa acctgtatgt ttgtgtcgtt ctctcgcaat
     2101 catttttact aatcctagta ctctgctcta gcttgcttca taactcccat ggctttgctt
     2161 gatctgttgt cgcttctcct catcaagact ttgcatcatg ttagccagcc agtatttacc
     2221 cattgttagg aaaatcgaga tgtggctgaa gatcagaggc tcagttagca acctacgttg
     2281 tagctgtgat gtcgacccat tggttgtctt tagagagtta atgttgaaac aagaaattct
     2341 tgatcagaca aacgtgatct gctgaagaca catgtgcttt tgtagaattt aacatctggt
     2401 gtttttctga aatattatat aaatatatat ataaacatat attgctttat ttgaaacaaa
     2461 ttaaaatatg ctgcatttga aaaaaaaaaa aaaaaaaaaa aaaaaa
//
