LOCUS       NM_181376               1216 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus spermatogenesis associated, serine-rich 1
            (Spats1), mRNA.
ACCESSION   NM_181376
VERSION     NM_181376.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Capoano,C.A., Wettstein,R., Kun,A. and Geisinger,A.
  TITLE     Spats 1 (Srsp1) is differentially expressed during testis
            development of the rat
  JOURNAL   Gene Expr Patterns 10 (1), 1-8 (2010)
   PUBMED   19948251
  REMARK    GeneRIF: Spats1 plays a role in the initiation of the first
            spermatogenic wave, and in the establishment or progression of the
            first male meiotic division.
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Lau,N.C., Seto,A.G., Kim,J., Kuramochi-Miyagawa,S., Nakano,T.,
            Bartel,D.P. and Kingston,R.E.
  TITLE     Characterization of the piRNA complex from rat testes
  JOURNAL   Science 313 (5785), 363-367 (2006)
   PUBMED   16778019
REFERENCE   3  (bases 1 to 1216)
  AUTHORS   Geisinger,A., Dos Santos,A., Benavente,R. and Wettstein,R.
  TITLE     Identification and characterization of SRSP1, a rat gene
            differentially expressed during spermatogenesis and coding for a
            serine stretch-containing protein
  JOURNAL   Cytogenet Genome Res 98 (4), 249-254 (2002)
   PUBMED   12826748
  REMARK    GeneRIF: The full length ORF encodes a putative phosphoprotein
            containing a serine stretch and a bipartite nuclear localization
            signal, which we call Srsp1 ('serin-rich spermatogenic protein 1').
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Mar 9, 2021 this sequence version replaced NM_181376.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.596787.1,
                                           SRR26360186.769392.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JAXUCZ010000009.1  23024609-23024690
            83-233              JAXUCZ010000009.1  23033337-23033487
            234-412             JAXUCZ010000009.1  23037258-23037436
            413-574             JAXUCZ010000009.1  23040389-23040550
            575-695             JAXUCZ010000009.1  23042711-23042831
            696-758             JAXUCZ010000009.1  23044039-23044101
            759-874             JAXUCZ010000009.1  23047217-23047332
            875-1216            JAXUCZ010000009.1  23059393-23059734
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1216
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /note="spermatogenesis associated, serine-rich 1"
                     /db_xref="GeneID:301255"
                     /db_xref="RGD:631367"
     exon            1..82
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..912
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /note="spermatogenic serine-rich protein 1"
                     /codon_start=1
                     /product="spermatogenesis-associated serine-rich protein
                     1"
                     /protein_id="NP_852041.2"
                     /db_xref="GeneID:301255"
                     /db_xref="RGD:631367"
                     /translation="MESSKDAQHSDVLESKGCLASRTSSHQNRRASLSSDGTGLRVTD
                     APGLPRVMTPSDTASGLGQKTSSTSSSSSSSSSSSPSSSSSAQANRSLKVSLPEIQKE
                     KYPEEFSLLKSQTTDGQRPEWTFYPRFSSNIHTYHVGKQCFFNGVFRGNRKSVAERTV
                     DKSLGKKKYDIDPRNGIPKLTPGDNPYMFPEQSKEFFKAGATLPPVNFSLGPYEKKFD
                     TFIPLEPLPQIPNLPFWEKEKANNLKNEIKEVEDLDNWQAPMPFLHGFLSTANRTITT
                     CDQKV"
     exon            83..233
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            234..412
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            413..574
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            575..695
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            696..758
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            759..874
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1216
                     /gene="Spats1"
                     /gene_synonym="Srsp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctttgcct ccgggcattc ggcagttccg ctgcccgttg gtgcgttgat ctgggccgta
       61 tccgcaatgg agtcctccaa ggatgcccag cacagtgatg ttctagaatc taaaggttgc
      121 ttggccagta ggacgtcctc tcatcaaaac agaagggcca gcctctcttc tgatggaacc
      181 ggtctgaggg tcactgatgc cccaggcctc cccagggtga tgactccctc tgacactgct
      241 tcggggctgg gtcagaagac ctcctccact tcatcctcct cctcttcatc ctcctcctcc
      301 tctccctcct cctcgtcctc tgcccaggct aatcggtcct tgaaagtctc actgcctgaa
      361 atccagaagg aaaaatatcc cgaggaattc agcctgctca agtcacagac aacagatggg
      421 cagcgtcctg agtggacatt ttatccaagg ttcagcagca acatccacac ctaccatgtt
      481 ggaaagcagt gtttcttcaa tggggtcttc cggggcaaca ggaagtctgt ggcagagagg
      541 acagtggaca agagccttgg gaagaagaaa tacgatattg atcccagaaa tggaatcccc
      601 aaattgacac caggagataa tccatacatg ttcccagaac agagtaaaga gttcttcaaa
      661 gctggggcaa ctctgccgcc agtgaacttc tcactgggac cttatgagaa aaaattcgac
      721 acctttatcc cacttgagcc acttccacaa attcccaatc tgcctttctg ggagaaggaa
      781 aaagccaata atttgaagaa cgagataaaa gaagttgagg atcttgacaa ctggcaggcg
      841 ccgatgccct tcctccacgg ttttctctcc actgctaatc gaacaataac tacctgtgat
      901 cagaaagtct agaaatctag tagttgttca gtcccacaag gctgcatgtt tcatctggtc
      961 ttcagtatat gctgcaatcc agaagtgggc tctaaagtca gaaggaatgg atgtgctagc
     1021 aaggtgaagg caaacaaaga acaaaagctt ccttcttctt atatagacgg ccagctgaag
     1081 gtgtggctca tattaaaggt atgtttttcc tgactcaaga tttggatcaa agactgtctt
     1141 ccacctcaag attcaaatga aaggtctgtc ttcccacctc aagattcgga ttaaagttgt
     1201 gtcttcctac ctcaaa
//
